RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 MEOX2P50222 304 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 CEBPGP53567 150 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 GFRA1P56159 465 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 PRDX4Q13162 271 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 RIPPLY2Q5TAB7 128 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 DPPA2Q7Z7J5 298 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 TUSC5Q8IXB3 177 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 C15orf54Q8N8G6 183 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 TMEM105Q8N8V8 129 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 CCDC71LQ8N9Z2 235 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 CCL28Q9NRJ3 127 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 MTCH1Q9NZJ7 389 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 KNTC1P50748 2209 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 DOCK10Q96BY6 2186 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 TRDCB7Z8K6 153 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 PROB1E7EW31 1015 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 RPL36A-HNRNPH2H7BZ11 118 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 CYTIPO60759 359 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 UCP2P55851 309 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 FOXO1Q12778 655 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 C20orf204Q6ZNR8 217 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 OR2G3Q8NGZ4 309 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 LILRB1Q8NHL6 650 aaPredicted RBP12.43□□□□□ -0.42
HDAC9-208ENST00000417496 RNF122Q9H9V4 155 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 GLRX2Q9NS18 164 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 PUS1Q9Y606 427 aaKnown RBP eCLIP12.43□□□□□ -0.42
HDAC9-208ENST00000417496 IGKV1-6A0A0C4DH72 117 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 ATXN7O15265 892 aaPredicted RBP12.42□□□□□ -0.42
HDAC9-208ENST00000417496 ACAA1P09110 424 aaPredicted RBP12.42□□□□□ -0.42
HDAC9-208ENST00000417496 EPHA1P21709 976 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 ATP6V0CP27449 155 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 OR2B8PP59922 312 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 RAB5BP61020 215 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 RUNX1Q01196 453 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 IZUMO4Q1ZYL8 232 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 SELENOHQ8IZQ5 122 aaKnown RBP12.42□□□□□ -0.42
HDAC9-208ENST00000417496 PSMF1Q92530 271 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 SPSB4Q96A44 273 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 ZNF552Q9H707 407 aaPredicted RBP12.42□□□□□ -0.42
HDAC9-208ENST00000417496 ZNF391Q9UJN7 358 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 PQLC2LA1A4F0 135 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 SLC22A20A6NK97 555 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 C1orf196B1AJZ1 125 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 ZNF732B4DXR9 585 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 HS3ST1O14792 307 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 SYNGR1O43759 233 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 LILRA1O75019 489 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 TK1P04183 234 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 ADAM5Q6NVV9 412 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 ZNF565Q8N9K5 539 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 OR5C1Q8NGR4 320 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 CPNE4Q96A23 557 aaPredicted RBP12.42□□□□□ -0.42
HDAC9-208ENST00000417496 EGLN1Q9GZT9 426 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 Q9N2K0 584 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 KCNJ16Q9NPI9 418 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 LRFN1Q9P244 771 aa12.42□□□□□ -0.42
HDAC9-208ENST00000417496 K7N7A8 449 aa12.41□□□□□ -0.42
HDAC9-208ENST00000417496 FBP1P09467 338 aa12.41□□□□□ -0.42
HDAC9-208ENST00000417496 ZXDAP98168 799 aa12.41□□□□□ -0.42
HDAC9-208ENST00000417496 EIF2S3LQ2VIR3 472 aaKnown RBP12.41□□□□□ -0.42
HDAC9-208ENST00000417496 SLC16A13Q7RTY0 426 aa12.41□□□□□ -0.42
HDAC9-208ENST00000417496 ODF3L1Q8IXM7 274 aa12.41□□□□□ -0.42
HDAC9-208ENST00000417496 TMEM252Q8N6L7 170 aa12.41□□□□□ -0.42
HDAC9-208ENST00000417496 CT55Q8WUE5 264 aa12.41□□□□□ -0.42
HDAC9-208ENST00000417496 SIGLEC12Q96PQ1 595 aa12.41□□□□□ -0.42
HDAC9-208ENST00000417496 REPIN1Q9BWE0 567 aaKnown RBP12.41□□□□□ -0.42
HDAC9-208ENST00000417496 SLC35B3Q9H1N7 401 aa12.41□□□□□ -0.42
HDAC9-208ENST00000417496 C11orf1Q9H5F2 150 aa12.41□□□□□ -0.42
HDAC9-208ENST00000417496 PCSK5Q92824 1860 aa12.41□□□□□ -0.42
HDAC9-208ENST00000417496 FAM166BA8MTA8 275 aa12.41□□□□□ -0.42
HDAC9-208ENST00000417496 LINC01387J3KSC0 135 aa12.41□□□□□ -0.42
HDAC9-208ENST00000417496 SULT1A1P50225 295 aa12.41□□□□□ -0.42
HDAC9-208ENST00000417496 TRA2AQ13595 282 aaKnown RBP eCLIP12.41□□□□□ -0.42
HDAC9-208ENST00000417496 TCEAL6Q6IPX3 200 aa12.41□□□□□ -0.42
HDAC9-208ENST00000417496 COLCA1Q6ZS62 124 aa12.41□□□□□ -0.42
HDAC9-208ENST00000417496 VASH2Q86V25 355 aa12.41□□□□□ -0.42
HDAC9-208ENST00000417496 C17orf78Q8N4C9 275 aa12.41□□□□□ -0.42
HDAC9-208ENST00000417496 TCEAL3Q969E4 200 aa12.41□□□□□ -0.42
HDAC9-208ENST00000417496 PRDM14Q9GZV8 571 aa12.41□□□□□ -0.42
HDAC9-208ENST00000417496 TRAV39A0A0B4J263 110 aa12.4□□□□□ -0.42
HDAC9-208ENST00000417496 H3BP45 60 aa12.4□□□□□ -0.42
HDAC9-208ENST00000417496 FOLR2P14207 255 aa12.4□□□□□ -0.42
HDAC9-208ENST00000417496 LMO1P25800 156 aa12.4□□□□□ -0.42
HDAC9-208ENST00000417496 C3AR1Q16581 482 aa12.4□□□□□ -0.42
HDAC9-208ENST00000417496 HAGHQ16775 308 aa12.4□□□□□ -0.42
HDAC9-208ENST00000417496 DCAF12Q5T6F0 453 aa12.4□□□□□ -0.42
HDAC9-208ENST00000417496 RDH5Q92781 318 aa12.4□□□□□ -0.42
HDAC9-208ENST00000417496 THOC3Q96J01 351 aaKnown RBP12.4□□□□□ -0.42
HDAC9-208ENST00000417496 PLSCR2Q9NRY7 297 aa12.4□□□□□ -0.42
HDAC9-208ENST00000417496 ZFHX4Q86UP3 3567 aa12.4□□□□□ -0.42
HDAC9-208ENST00000417496 CHST1O43916 411 aa12.4□□□□□ -0.42
HDAC9-208ENST00000417496 CDS2O95674 445 aa12.4□□□□□ -0.42
HDAC9-208ENST00000417496 NAPSAO96009 420 aa12.4□□□□□ -0.42
HDAC9-208ENST00000417496 MT-ND4LP03901 98 aa12.4□□□□□ -0.42
HDAC9-208ENST00000417496 S100A6P06703 90 aa12.4□□□□□ -0.42
HDAC9-208ENST00000417496 DYNLT3P51808 116 aa12.4□□□□□ -0.42
HDAC9-208ENST00000417496 HMGN3Q15651 99 aa12.4□□□□□ -0.42
HDAC9-208ENST00000417496 MRPL21Q7Z2W9 205 aaKnown RBP12.4□□□□□ -0.42
HDAC9-208ENST00000417496 NANPQ8TBE9 248 aa12.4□□□□□ -0.42
HDAC9-208ENST00000417496 TMEM56Q96MV1 263 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms