RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 ERP29P30040 261 aaKnown RBP11.86□□□□□ -0.51
SF3B1-204ENST00000414963 DGCR2P98153 550 aa11.86□□□□□ -0.51
SF3B1-204ENST00000414963 GUCA2AQ02747 115 aa11.86□□□□□ -0.51
SF3B1-204ENST00000414963 ARFRP1Q13795 201 aa11.86□□□□□ -0.51
SF3B1-204ENST00000414963 AVPI1Q5T686 147 aa11.86□□□□□ -0.51
SF3B1-204ENST00000414963 LYPD2Q6UXB3 125 aa11.86□□□□□ -0.51
SF3B1-204ENST00000414963 SPICQ8N5J4 248 aa11.86□□□□□ -0.51
SF3B1-204ENST00000414963 ASCC1Q8N9N2 400 aaKnown RBP11.86□□□□□ -0.51
SF3B1-204ENST00000414963 ZNRF1Q8ND25 227 aa11.86□□□□□ -0.51
SF3B1-204ENST00000414963 PLPPR1Q8TBJ4 325 aa11.86□□□□□ -0.51
SF3B1-204ENST00000414963 NEK7Q8TDX7 302 aa11.86□□□□□ -0.51
SF3B1-204ENST00000414963 C10orf105Q8TEF2 133 aa11.86□□□□□ -0.51
SF3B1-204ENST00000414963 NUDCD2Q8WVJ2 157 aa11.86□□□□□ -0.51
SF3B1-204ENST00000414963 GCDHQ92947 438 aaPredicted RBP11.86□□□□□ -0.51
SF3B1-204ENST00000414963 BORCS5Q969J3 196 aa11.86□□□□□ -0.51
SF3B1-204ENST00000414963 TRIM63Q969Q1 353 aa11.86□□□□□ -0.51
SF3B1-204ENST00000414963 PERPQ96FX8 193 aa11.86□□□□□ -0.51
SF3B1-204ENST00000414963 LURAP1Q96LR2 239 aa11.86□□□□□ -0.51
SF3B1-204ENST00000414963 CMSS1Q9BQ75 279 aaKnown RBP11.86□□□□□ -0.51
SF3B1-204ENST00000414963 PPA2Q9H2U2 334 aa11.86□□□□□ -0.51
SF3B1-204ENST00000414963 C12orf4Q9NQ89 552 aa11.86□□□□□ -0.51
SF3B1-204ENST00000414963 ZNF107Q9UII5 783 aaPredicted RBP11.86□□□□□ -0.51
SF3B1-204ENST00000414963 POLQO75417 2590 aa11.85□□□□□ -0.51
SF3B1-204ENST00000414963 CEACAM18A8MTB9 384 aa11.85□□□□□ -0.51
SF3B1-204ENST00000414963 HSPB6O14558 160 aa11.85□□□□□ -0.51
SF3B1-204ENST00000414963 ORC5O43913 435 aa11.85□□□□□ -0.51
SF3B1-204ENST00000414963 RBBP9O75884 186 aa11.85□□□□□ -0.51
SF3B1-204ENST00000414963 WNT2P09544 360 aa11.85□□□□□ -0.51
SF3B1-204ENST00000414963 NAT1P18440 290 aa11.85□□□□□ -0.51
SF3B1-204ENST00000414963 GRK1Q15835 563 aa11.85□□□□□ -0.51
SF3B1-204ENST00000414963 CARTPTQ16568 116 aa11.85□□□□□ -0.51
SF3B1-204ENST00000414963 BAK1Q16611 211 aa11.85□□□□□ -0.51
SF3B1-204ENST00000414963 RSBN1Q5VWQ0 802 aaPredicted RBP11.85□□□□□ -0.51
SF3B1-204ENST00000414963 ZNF880Q6PDB4 577 aa11.85□□□□□ -0.51
SF3B1-204ENST00000414963 CLEC2AQ6UVW9 174 aa11.85□□□□□ -0.51
SF3B1-204ENST00000414963 Q6ZS49 121 aa11.85□□□□□ -0.51
SF3B1-204ENST00000414963 FAM216BQ8N7L0 139 aa11.85□□□□□ -0.51
SF3B1-204ENST00000414963 FAM168AQ92567 244 aa11.85□□□□□ -0.51
SF3B1-204ENST00000414963 DYRK2Q92630 601 aa11.85□□□□□ -0.51
SF3B1-204ENST00000414963 COQ2Q96H96 371 aa11.85□□□□□ -0.51
SF3B1-204ENST00000414963 CTSZQ9UBR2 303 aa11.85□□□□□ -0.51
SF3B1-204ENST00000414963 A0A1B0GW55 424 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 TMEM30CPA0ZSE6 113 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 FUOMA2VDF0 154 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 ISPDA4D126 451 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 F5H0A9 414 aaPredicted RBP11.84□□□□□ -0.51
SF3B1-204ENST00000414963 GPR37O15354 613 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 NDUFB3O43676 98 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 LANCL1O43813 399 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 FCN3O75636 299 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 UPK1BO75841 260 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 FCGR3AP08637 254 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 DUX4L2P0CJ85 424 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 DUX4L3P0CJ86 424 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 DUX4L4P0CJ87 422 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 DUX4L5P0CJ88 424 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 DUX4L6P0CJ89 424 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 DUX4L7P0CJ90 424 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 IL7P13232 177 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 P2RX3P56373 397 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 ACTBP60709 375 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 ACTG1P63261 375 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 MRPS15P82914 257 aaKnown RBP11.84□□□□□ -0.51
SF3B1-204ENST00000414963 CR1LQ2VPA4 569 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 C11orf91Q3C1V1 193 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 LRRC10Q5BKY1 277 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 DUX4L9Q6RFH8 374 aaPredicted RBP11.84□□□□□ -0.51
SF3B1-204ENST00000414963 PRSS57Q6UWY2 283 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 ZNF841Q6ZN19 808 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 TRAPPC6BQ86SZ2 158 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 HOGA1Q86XE5 327 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 MRPL30Q8TCC3 161 aaKnown RBP11.84□□□□□ -0.51
SF3B1-204ENST00000414963 NEIL1Q96FI4 390 aaPredicted RBP11.84□□□□□ -0.51
SF3B1-204ENST00000414963 HDHD3Q9BSH5 251 aaPredicted RBP11.84□□□□□ -0.51
SF3B1-204ENST00000414963 PIMREGQ9BSJ6 248 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 PATZ1Q9HBE1 687 aaKnown RBP11.84□□□□□ -0.51
SF3B1-204ENST00000414963 PALMDQ9NP74 551 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 TAS2R8Q9NYW2 309 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 DUX4Q9UBX2 424 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 KLK11Q9UBX7 282 aa11.84□□□□□ -0.51
SF3B1-204ENST00000414963 DVL1O14640 695 aa11.83□□□□□ -0.52
SF3B1-204ENST00000414963 SELLP14151 372 aa11.83□□□□□ -0.52
SF3B1-204ENST00000414963 RCVRNP35243 200 aa11.83□□□□□ -0.52
SF3B1-204ENST00000414963 GDNFP39905 211 aa11.83□□□□□ -0.52
SF3B1-204ENST00000414963 AESQ08117 197 aa11.83□□□□□ -0.52
SF3B1-204ENST00000414963 ATXN7L3Q14CW9 347 aaPredicted RBP11.83□□□□□ -0.52
SF3B1-204ENST00000414963 KRBOX4Q5JUW0 171 aa11.83□□□□□ -0.52
SF3B1-204ENST00000414963 Q6ZPA2 131 aa11.83□□□□□ -0.52
SF3B1-204ENST00000414963 GDPD3Q7L5L3 318 aa11.83□□□□□ -0.52
SF3B1-204ENST00000414963 MOB1BQ7L9L4 216 aa11.83□□□□□ -0.52
SF3B1-204ENST00000414963 NLRC3Q7RTR2 1065 aa11.83□□□□□ -0.52
SF3B1-204ENST00000414963 TMEM185AQ8NFB2 350 aa11.83□□□□□ -0.52
SF3B1-204ENST00000414963 OR8B3Q8NGG8 313 aa11.83□□□□□ -0.52
SF3B1-204ENST00000414963 DEDD2Q8WXF8 326 aa11.83□□□□□ -0.52
SF3B1-204ENST00000414963 OR8B2Q96RD0 313 aa11.83□□□□□ -0.52
SF3B1-204ENST00000414963 BPESC1Q9GZL8 116 aa11.83□□□□□ -0.52
SF3B1-204ENST00000414963 Q9N2K0 584 aa11.83□□□□□ -0.52
SF3B1-204ENST00000414963 MBNL3Q9NUK0 354 aaKnown RBP11.83□□□□□ -0.52
SF3B1-204ENST00000414963 SLC25A10Q9UBX3 287 aaPredicted RBP11.83□□□□□ -0.52
SF3B1-204ENST00000414963 MGAT4AQ9UM21 535 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms