RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 KIR2DL2P43627 348 aaPredicted RBP11.6□□□□□ -0.55
LIMS1-205ENST00000410093 UCP2P55851 309 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 AANATQ16613 207 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 C3orf36Q3SXR2 165 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 PAN3Q58A45 887 aaKnown RBP11.6□□□□□ -0.55
LIMS1-205ENST00000410093 EIF5AL1Q6IS14 154 aaKnown RBP11.6□□□□□ -0.55
LIMS1-205ENST00000410093 BEND4Q6ZU67 534 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 HSD17B13Q7Z5P4 300 aaPredicted RBP11.6□□□□□ -0.55
LIMS1-205ENST00000410093 MBD3L2Q8NHZ7 208 aaPredicted RBP11.6□□□□□ -0.55
LIMS1-205ENST00000410093 RBPMSQ93062 196 aaKnown RBP11.6□□□□□ -0.55
LIMS1-205ENST00000410093 RNF126Q9BV68 326 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 ZNF471Q9BX82 626 aaPredicted RBP11.6□□□□□ -0.55
LIMS1-205ENST00000410093 BCL2L14Q9BZR8 327 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 FGF23Q9GZV9 251 aaPredicted RBP11.6□□□□□ -0.55
LIMS1-205ENST00000410093 SHARPINQ9H0F6 387 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 SLC2A9Q9NRM0 540 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 ATMQ13315 3056 aa11.59□□□□□ -0.55
LIMS1-205ENST00000410093 NUDT19A8MXV4 375 aa11.59□□□□□ -0.55
LIMS1-205ENST00000410093 KRBOX1C9JBD0 128 aa11.59□□□□□ -0.55
LIMS1-205ENST00000410093 F5H0A9 414 aaPredicted RBP11.59□□□□□ -0.55
LIMS1-205ENST00000410093 MSTNO14793 375 aa11.59□□□□□ -0.55
LIMS1-205ENST00000410093 WDR1O75083 606 aa11.59□□□□□ -0.55
LIMS1-205ENST00000410093 SPDEFO95238 335 aa11.59□□□□□ -0.55
LIMS1-205ENST00000410093 PRKACAP17612 351 aa11.59□□□□□ -0.55
LIMS1-205ENST00000410093 TMEM187Q14656 261 aa11.59□□□□□ -0.55
LIMS1-205ENST00000410093 DAZAP2Q15038 168 aaPredicted RBP11.59□□□□□ -0.55
LIMS1-205ENST00000410093 SPIN3Q5JUX0 258 aa11.59□□□□□ -0.55
LIMS1-205ENST00000410093 ZNF880Q6PDB4 577 aa11.59□□□□□ -0.55
LIMS1-205ENST00000410093 ALKAL2Q6UX46 152 aa11.59□□□□□ -0.55
LIMS1-205ENST00000410093 LIAT1Q6ZQX7 453 aa11.59□□□□□ -0.55
LIMS1-205ENST00000410093 Q6ZS92 163 aa11.59□□□□□ -0.55
LIMS1-205ENST00000410093 OR4A4PQ8NGN8 299 aa11.59□□□□□ -0.55
LIMS1-205ENST00000410093 DOCK7Q96N67 2140 aa11.59□□□□□ -0.55
LIMS1-205ENST00000410093 PLEKHA2Q9HB19 425 aa11.59□□□□□ -0.55
LIMS1-205ENST00000410093 GLS2Q9UI32 602 aa11.59□□□□□ -0.55
LIMS1-205ENST00000410093 PROCRQ9UNN8 238 aa11.59□□□□□ -0.55
LIMS1-205ENST00000410093 MFSD2BA6NFX1 497 aa11.58□□□□□ -0.56
LIMS1-205ENST00000410093 NPIPB11E5RHQ5 1161 aa11.58□□□□□ -0.56
LIMS1-205ENST00000410093 ADAP1O75689 374 aa11.58□□□□□ -0.56
LIMS1-205ENST00000410093 WNT2P09544 360 aa11.58□□□□□ -0.56
LIMS1-205ENST00000410093 CA6P23280 308 aa11.58□□□□□ -0.56
LIMS1-205ENST00000410093 IL32P24001 234 aa11.58□□□□□ -0.56
LIMS1-205ENST00000410093 IAH1Q2TAA2 248 aaPredicted RBP11.58□□□□□ -0.56
LIMS1-205ENST00000410093 KRTCAP3Q53RY4 240 aa11.58□□□□□ -0.56
LIMS1-205ENST00000410093 TOR2AQ5JU69 321 aa11.58□□□□□ -0.56
LIMS1-205ENST00000410093 OR2T2Q6IF00 324 aa11.58□□□□□ -0.56
LIMS1-205ENST00000410093 CNEP1R1Q8N9A8 125 aa11.58□□□□□ -0.56
LIMS1-205ENST00000410093 ZNF565Q8N9K5 539 aa11.58□□□□□ -0.56
LIMS1-205ENST00000410093 NEK7Q8TDX7 302 aa11.58□□□□□ -0.56
LIMS1-205ENST00000410093 TOMM40LQ969M1 308 aa11.58□□□□□ -0.56
LIMS1-205ENST00000410093 ABHD14BQ96IU4 210 aa11.58□□□□□ -0.56
LIMS1-205ENST00000410093 DEGS1O15121 323 aa11.57□□□□□ -0.56
LIMS1-205ENST00000410093 TUSC2O75896 110 aa11.57□□□□□ -0.56
LIMS1-205ENST00000410093 HOXB5P09067 269 aa11.57□□□□□ -0.56
LIMS1-205ENST00000410093 AADACP22760 399 aa11.57□□□□□ -0.56
LIMS1-205ENST00000410093 DUSP1P28562 367 aa11.57□□□□□ -0.56
LIMS1-205ENST00000410093 IDH3GP51553 393 aaPredicted RBP11.57□□□□□ -0.56
LIMS1-205ENST00000410093 LUMP51884 338 aaPredicted RBP11.57□□□□□ -0.56
LIMS1-205ENST00000410093 ERVK11-1P61568 191 aa11.57□□□□□ -0.56
LIMS1-205ENST00000410093 SNTB1Q13884 538 aaKnown RBP11.57□□□□□ -0.56
LIMS1-205ENST00000410093 C9orf106Q8NAJ2 232 aa11.57□□□□□ -0.56
LIMS1-205ENST00000410093 SUMF2Q8NBJ7 301 aa11.57□□□□□ -0.56
LIMS1-205ENST00000410093 NAXEQ8NCW5 288 aa11.57□□□□□ -0.56
LIMS1-205ENST00000410093 OR1J1Q8NGS3 322 aa11.57□□□□□ -0.56
LIMS1-205ENST00000410093 LILRB1Q8NHL6 650 aaPredicted RBP11.57□□□□□ -0.56
LIMS1-205ENST00000410093 IL22RA2Q969J5 263 aa11.57□□□□□ -0.56
LIMS1-205ENST00000410093 C18orf12Q96KH6 178 aa11.57□□□□□ -0.56
LIMS1-205ENST00000410093 OR10C1Q96KK4 312 aa11.57□□□□□ -0.56
LIMS1-205ENST00000410093 SPIN2AQ99865 258 aa11.57□□□□□ -0.56
LIMS1-205ENST00000410093 SPIN2BQ9BPZ2 258 aa11.57□□□□□ -0.56
LIMS1-205ENST00000410093 LIME1Q9H400 295 aa11.57□□□□□ -0.56
LIMS1-205ENST00000410093 SDHAF2Q9NX18 166 aa11.57□□□□□ -0.56
LIMS1-205ENST00000410093 NUP50Q9UKX7 468 aa11.57□□□□□ -0.56
LIMS1-205ENST00000410093 E5RGE8 158 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 MKRN2OSH3BPM6 223 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 I3L521 148 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 J3QKU1 62 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 GPR31O00270 319 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 SH2D1BO14796 132 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 MPPED1O15442 326 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 SYNGR1O43759 233 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 LYZL6O75951 148 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 CDS2O95674 445 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 IGLV1-44P01699 117 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 PGA5P0DJD9 388 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 PLA2G2AP14555 144 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 KITLGP21583 273 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 KCNJ3P48549 501 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 ZNF146Q15072 292 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 GGNBP1Q5YKI7 109 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 LDLRAD3Q86YD5 345 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 BAP18Q8IXM2 172 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 CMTM1Q8IZ96 169 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 GCNT2Q8N0V5 402 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 GAPTQ8N292 157 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 BHLHE23Q8NDY6 225 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 OR8G5Q8NG78 346 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 OR5T2Q8NGG2 359 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 SLC25A40Q8TBP6 338 aa11.56□□□□□ -0.56
LIMS1-205ENST00000410093 MARS2Q96GW9 593 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms