RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 UBE2L3P68036 154 aaKnown RBP7.42□□□□□ -1.22
SCN9A-203ENST00000409672 Q6ZN92 141 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 DYNC2LI1Q8TCX1 351 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 JAM3Q9BX67 310 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 NKX6-2Q9C056 277 aaPredicted RBP7.42□□□□□ -1.22
SCN9A-203ENST00000409672 RNF7Q9UBF6 113 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 SCGB1A1P11684 91 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 RPL31P62899 125 aaKnown RBP7.42□□□□□ -1.22
SCN9A-203ENST00000409672 SMIM19Q96E16 107 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 HEXA-AS1Q9H8Q6 139 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 TO15178 435 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 MELTFP08582 738 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 Q71RC1 249 aaPredicted RBP7.42□□□□□ -1.22
SCN9A-203ENST00000409672 FUNDC1Q8IVP5 155 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 OR4C12Q96R67 309 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 MAST2Q6P0Q8 1798 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 TEX50A0A1B0GTY4 177 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 KIR2DL1P43626 348 aaPredicted RBP7.42□□□□□ -1.22
SCN9A-203ENST00000409672 KIR2DL2P43627 348 aaPredicted RBP7.42□□□□□ -1.22
SCN9A-203ENST00000409672 SRSF9Q13242 221 aaKnown RBP eCLIP7.42□□□□□ -1.22
SCN9A-203ENST00000409672 GNPNAT1Q96EK6 184 aaPredicted RBP7.42□□□□□ -1.22
SCN9A-203ENST00000409672 UQCC1Q9NVA1 299 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 THY1P04216 161 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 DLX1P56177 255 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 PCOLCEQ15113 449 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 OR2D3Q8NGH3 330 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 ZNF502Q8TBZ5 544 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 NT5CQ8TCD5 201 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 CCL27Q9Y4X3 112 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 OR2T8A6NH00 312 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 ADAM11O75078 769 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 ASCL5Q7RTU5 278 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 OR4C16Q8NGL9 310 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 OR5C1Q8NGR4 320 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 CRYGNQ8WXF5 182 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 R3HDM4Q96D70 268 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 TTTY12Q9BZ98 90 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 ZNF737O75373 536 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 DHRS3O75911 302 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 MIDNQ504T8 468 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 WDR38Q5JTN6 314 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 ZG16BQ96DA0 208 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 SLC25A37Q9NYZ2 338 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 IGKV3D-20A0A0C4DH25 116 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 GIPP09681 153 aaPredicted RBP7.41□□□□□ -1.22
SCN9A-203ENST00000409672 PRR35P0CG20 571 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 GABRB1P18505 474 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 B4GALNT1Q00973 533 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 FUT7Q11130 342 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 Q8IYB0 196 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 GBGT1Q8N5D6 347 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 LINC01555Q8NAE3 123 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 OR4C5Q8NGB2 326 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.41□□□□□ -1.22
SCN9A-203ENST00000409672 DOPEY2Q9Y3R5 2298 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 TRIM77I1YAP6 450 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 HERPUD1Q15011 391 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 SLC23A3Q6PIS1 610 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 DHRS4L2Q6PKH6 230 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 WDR88Q6ZMY6 472 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 GPX7Q96SL4 187 aaPredicted RBP7.41□□□□□ -1.22
SCN9A-203ENST00000409672 PLPP3O14495 311 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 PPP1R17O96001 155 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 SRD5A2P31213 254 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 RELAQ04206 551 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 ADIPOQQ15848 244 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 OR8B12Q8NGG6 310 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 OIT3Q8WWZ8 545 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 MOGAT1Q96PD6 335 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 OR2V2Q96R30 315 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 RBFOX1Q9NWB1 397 aaKnown RBP7.41□□□□□ -1.22
SCN9A-203ENST00000409672 INPP5JQ15735 1006 aaPredicted RBP7.41□□□□□ -1.22
SCN9A-203ENST00000409672 SLC51BQ86UW2 128 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 DUSP18Q8NEJ0 188 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 MED30Q96HR3 178 aa7.41□□□□□ -1.22
SCN9A-203ENST00000409672 PPIAL4EA0A075B759 164 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 PPIAL4DF5H284 164 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 CLDN14O95500 239 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 PPIAL4FP0DN26 164 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 MRGPRGQ86SM5 289 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 MARVELD3Q96A59 401 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 KLK15Q9H2R5 256 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 MS4A5Q9H3V2 200 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 PRSS50Q9UI38 385 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 PPIAL4AQ9Y536 164 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 MYO7BQ6PIF6 2116 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 OOEPA6NGQ2 149 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 IFITM5A6NNB3 132 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 ATP6V1G2-DDX39BF2Z307 99 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 CIDEAO60543 219 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 CXCL10P02778 98 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 DLEU7Q6UYE1 221 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 MRGPRX3Q96LB0 322 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 C2orf50Q96LR7 162 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 STRCQ7RTU9 1775 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 A0A1B0GU03 582 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 FAM24AA6NFZ4 105 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 PSG6Q00889 435 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 DCAF10Q5QP82 559 aa7.4□□□□□ -1.22
SCN9A-203ENST00000409672 FAM78BQ5VT40 261 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms