RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 C11orf91Q3C1V1 193 aa13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 ESCO2Q56NI9 601 aa13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 TMEM69Q5SWH9 247 aa13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 C17orf107Q6ZR85 190 aa13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 LAX1Q8IWV1 398 aa13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 MSI2Q96DH6 328 aaKnown RBP13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 WDFY2Q96P53 400 aa13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 PPA2Q9H2U2 334 aa13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 RABL2AQ9UBK7 228 aaPredicted RBP13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 CLN8Q9UBY8 286 aa13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 METRNQ9UJH8 293 aa13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 RABL2BQ9UNT1 228 aa13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 MALRD1Q5VYJ5 2156 aa13.72□□□□□ -0.21
TSPAN4-208ENST00000409531 TMEM82A0PJX8 343 aa13.71□□□□□ -0.21
TSPAN4-208ENST00000409531 DVL1O14640 695 aa13.71□□□□□ -0.21
TSPAN4-208ENST00000409531 CA11O75493 328 aa13.71□□□□□ -0.21
TSPAN4-208ENST00000409531 TPPPO94811 219 aa13.71□□□□□ -0.21
TSPAN4-208ENST00000409531 TMEM50BP56557 158 aa13.71□□□□□ -0.21
TSPAN4-208ENST00000409531 LMO4P61968 165 aa13.71□□□□□ -0.21
TSPAN4-208ENST00000409531 GNB2P62879 340 aa13.71□□□□□ -0.21
TSPAN4-208ENST00000409531 MOGAT2Q3SYC2 334 aa13.71□□□□□ -0.21
TSPAN4-208ENST00000409531 BAIAP2L2Q6UXY1 529 aa13.71□□□□□ -0.21
TSPAN4-208ENST00000409531 GDPD3Q7L5L3 318 aa13.71□□□□□ -0.21
TSPAN4-208ENST00000409531 DIRAS2Q96HU8 199 aa13.71□□□□□ -0.21
TSPAN4-208ENST00000409531 ARHGAP5-AS1Q96IT6 56 aa13.71□□□□□ -0.21
TSPAN4-208ENST00000409531 CHST6Q9GZX3 395 aa13.71□□□□□ -0.21
TSPAN4-208ENST00000409531 MIXL1Q9H2W2 232 aa13.71□□□□□ -0.21
TSPAN4-208ENST00000409531 EXTL2Q9UBQ6 330 aa13.71□□□□□ -0.21
TSPAN4-208ENST00000409531 CTSZQ9UBR2 303 aa13.71□□□□□ -0.21
TSPAN4-208ENST00000409531 SERPINE3A8MV23 424 aa13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 HSPB6O14558 160 aa13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 TGFAP01135 160 aa13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 GSTP1P09211 210 aaKnown RBP13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 SELLP14151 372 aa13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 HIST1H1DP16402 221 aaKnown RBP13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 NDUFB7P17568 137 aa13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 IL2RGP31785 369 aa13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 MNDAP41218 407 aa13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 OR3A1P47881 315 aa13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 MRPS15P82914 257 aaKnown RBP13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 PAX5Q02548 391 aa13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 METAP1DQ6UB28 335 aaPredicted RBP13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 ZNF841Q6ZN19 808 aa13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 LINC00299Q6ZSB3 139 aa13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 C6orf201Q7Z4U5 140 aa13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 OR4S1Q8NGB4 309 aa13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 C15orf40Q8WUR7 153 aa13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 ST8SIA4Q92187 359 aa13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 C1orf159Q96HA4 380 aa13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 SSBP3Q9BWW4 388 aaPredicted RBP13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 PECRQ9BY49 303 aa13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 SHARPINQ9H0F6 387 aa13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 ZNF581Q9P0T4 197 aa13.7□□□□□ -0.22
TSPAN4-208ENST00000409531 TRAV18A0A075B6X5 111 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 A0A1B0GW55 424 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 UBE2QL1A1L167 161 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 CRLF1O75462 422 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 ECDO95905 644 aaPredicted RBP13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 DUX4L2P0CJ85 424 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 DUX4L3P0CJ86 424 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 DUX4L4P0CJ87 422 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 DUX4L5P0CJ88 424 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 DUX4L6P0CJ89 424 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 DUX4L7P0CJ90 424 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 ERP29P30040 261 aaKnown RBP13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 TNFSF8P32971 234 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 ATXN7L3Q14CW9 347 aaPredicted RBP13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 CDNFQ49AH0 187 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 PLAC9Q5JTB6 97 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 CD276Q5ZPR3 534 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 WDR25Q64LD2 544 aaPredicted RBP13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 CNIH2Q6PI25 160 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 DUX4L9Q6RFH8 374 aaPredicted RBP13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 BPIFB2Q8N4F0 458 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 OR6Q1Q8NGQ2 317 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 SULT4A1Q9BR01 284 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 FAAP24Q9BTP7 215 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 ETAA1Q9NY74 926 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 DUX4Q9UBX2 424 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 LPAR3Q9UBY5 353 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 KIAA2026Q5HYC2 2103 aa13.69□□□□□ -0.22
TSPAN4-208ENST00000409531 MFNGO00587 321 aa13.68□□□□□ -0.22
TSPAN4-208ENST00000409531 FOXH1O75593 365 aa13.68□□□□□ -0.22
TSPAN4-208ENST00000409531 GNB3P16520 340 aa13.68□□□□□ -0.22
TSPAN4-208ENST00000409531 ZNF16P17020 682 aaPredicted RBP13.68□□□□□ -0.22
TSPAN4-208ENST00000409531 EDDM3BP56851 147 aa13.68□□□□□ -0.22
TSPAN4-208ENST00000409531 TAS2R20P59543 309 aa13.68□□□□□ -0.22
TSPAN4-208ENST00000409531 PITPNAQ00169 270 aa13.68□□□□□ -0.22
TSPAN4-208ENST00000409531 PNLIPRP3Q17RR3 467 aa13.68□□□□□ -0.22
TSPAN4-208ENST00000409531 ZNF260Q3ZCT1 412 aa13.68□□□□□ -0.22
TSPAN4-208ENST00000409531 KRBOX4Q5JUW0 171 aa13.68□□□□□ -0.22
TSPAN4-208ENST00000409531 SPANXN2Q5MJ10 180 aa13.68□□□□□ -0.22
TSPAN4-208ENST00000409531 BRICD5Q6PL45 260 aa13.68□□□□□ -0.22
TSPAN4-208ENST00000409531 LINC01356Q8N9X3 169 aa13.68□□□□□ -0.22
TSPAN4-208ENST00000409531 OR4M1Q8NGD0 313 aa13.68□□□□□ -0.22
TSPAN4-208ENST00000409531 RIMS4Q9H426 269 aaPredicted RBP13.68□□□□□ -0.22
TSPAN4-208ENST00000409531 NCOR1P1Q9H4R4 102 aa13.68□□□□□ -0.22
TSPAN4-208ENST00000409531 TMEM160Q9NX00 188 aa13.68□□□□□ -0.22
TSPAN4-208ENST00000409531 TRBV23-1A0A0A0MS06 115 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms