RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 A8MXK9 166 aa10.21□□□□□ -0.77
LINC00339-201ENST00000404210 RNF223E7ERA6 249 aa10.21□□□□□ -0.77
LINC00339-201ENST00000404210 MFNGO00587 321 aa10.21□□□□□ -0.77
LINC00339-201ENST00000404210 FOXH1O75593 365 aa10.21□□□□□ -0.77
LINC00339-201ENST00000404210 GNB3P16520 340 aa10.21□□□□□ -0.77
LINC00339-201ENST00000404210 NDUFB7P17568 137 aa10.21□□□□□ -0.77
LINC00339-201ENST00000404210 TALDO1P37837 337 aa10.21□□□□□ -0.77
LINC00339-201ENST00000404210 MNDAP41218 407 aa10.21□□□□□ -0.77
LINC00339-201ENST00000404210 SEC61A1P61619 476 aaKnown RBP10.21□□□□□ -0.77
LINC00339-201ENST00000404210 PNLIPRP3Q17RR3 467 aa10.21□□□□□ -0.77
LINC00339-201ENST00000404210 BAIAP2L2Q6UXY1 529 aa10.21□□□□□ -0.77
LINC00339-201ENST00000404210 GDPD3Q7L5L3 318 aa10.21□□□□□ -0.77
LINC00339-201ENST00000404210 GAPTQ8N292 157 aa10.21□□□□□ -0.77
LINC00339-201ENST00000404210 OR4M1Q8NGD0 313 aa10.21□□□□□ -0.77
LINC00339-201ENST00000404210 PLPPR1Q8TBJ4 325 aa10.21□□□□□ -0.77
LINC00339-201ENST00000404210 NEK7Q8TDX7 302 aa10.21□□□□□ -0.77
LINC00339-201ENST00000404210 C15orf40Q8WUR7 153 aa10.21□□□□□ -0.77
LINC00339-201ENST00000404210 ST8SIA4Q92187 359 aa10.21□□□□□ -0.77
LINC00339-201ENST00000404210 DMRTB1Q96MA1 342 aa10.21□□□□□ -0.77
LINC00339-201ENST00000404210 ETAA1Q9NY74 926 aa10.21□□□□□ -0.77
LINC00339-201ENST00000404210 POLQO75417 2590 aa10.21□□□□□ -0.78
LINC00339-201ENST00000404210 NAV2Q8IVL1 2488 aa10.21□□□□□ -0.78
LINC00339-201ENST00000404210 LOC105371242A0A075B767 164 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 H7C1Q1 480 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 HSPB6O14558 160 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 HLA-DQB1P01920 261 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 MT-ND4P03905 459 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 IL2RGP31785 369 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 TAS2R20P59543 309 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 PITPNAQ00169 270 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 MEF2CQ06413 473 aaPredicted RBP10.2□□□□□ -0.78
LINC00339-201ENST00000404210 AESQ08117 197 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 KRBOX4Q5JUW0 171 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 TMEM69Q5SWH9 247 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 HACD4Q5VWC8 232 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 RSBN1Q5VWQ0 802 aaPredicted RBP10.2□□□□□ -0.78
LINC00339-201ENST00000404210 CNIH2Q6PI25 160 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 BTN2A1Q7KYR7 527 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 CCDC190Q86UF4 302 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 FGFRL1Q8N441 504 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 DTX3Q8N9I9 347 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 CORO2AQ92828 525 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 COQ2Q96H96 371 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 SOSTQ9BQB4 213 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 DCTN5Q9BTE1 182 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 AUNIPQ9H7T9 357 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 ZMAT3Q9HA38 289 aaKnown RBP10.2□□□□□ -0.78
LINC00339-201ENST00000404210 AK3Q9UIJ7 227 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 ITPR2Q14571 2701 aa10.2□□□□□ -0.78
LINC00339-201ENST00000404210 MALRD1Q5VYJ5 2156 aa10.19□□□□□ -0.78
LINC00339-201ENST00000404210 TACC2O95359 2948 aa10.19□□□□□ -0.78
LINC00339-201ENST00000404210 TRBV23-1A0A0A0MS06 115 aa10.19□□□□□ -0.78
LINC00339-201ENST00000404210 TRBV6-6A0A0A6YYG2 114 aa10.19□□□□□ -0.78
LINC00339-201ENST00000404210 FABP12A6NFH5 140 aa10.19□□□□□ -0.78
LINC00339-201ENST00000404210 KIAA1324LA8MWY0 1029 aaPredicted RBP10.19□□□□□ -0.78
LINC00339-201ENST00000404210 FAM157AC9JC47 383 aa10.19□□□□□ -0.78
LINC00339-201ENST00000404210 CD3GP09693 182 aa10.19□□□□□ -0.78
LINC00339-201ENST00000404210 PTBP1P26599 531 aaKnown RBP eCLIP10.19□□□□□ -0.78
LINC00339-201ENST00000404210 ZFP36P26651 326 aaKnown RBP10.19□□□□□ -0.78
LINC00339-201ENST00000404210 ETV6P41212 452 aa10.19□□□□□ -0.78
LINC00339-201ENST00000404210 GLIPR1P48060 266 aa10.19□□□□□ -0.78
LINC00339-201ENST00000404210 P2RX3P56373 397 aa10.19□□□□□ -0.78
LINC00339-201ENST00000404210 EDDM3BP56851 147 aa10.19□□□□□ -0.78
LINC00339-201ENST00000404210 ATXN7L3Q14CW9 347 aaPredicted RBP10.19□□□□□ -0.78
LINC00339-201ENST00000404210 CR1LQ2VPA4 569 aa10.19□□□□□ -0.78
LINC00339-201ENST00000404210 ZNF497Q6ZNH5 498 aa10.19□□□□□ -0.78
LINC00339-201ENST00000404210 RTN4RL2Q86UN3 420 aa10.19□□□□□ -0.78
LINC00339-201ENST00000404210 IZUMO1Q8IYV9 350 aa10.19□□□□□ -0.78
LINC00339-201ENST00000404210 LY6G5BQ8NDX9 201 aa10.19□□□□□ -0.78
LINC00339-201ENST00000404210 C8orf46Q8TAG6 207 aa10.19□□□□□ -0.78
LINC00339-201ENST00000404210 H1FXQ92522 213 aaKnown RBP10.19□□□□□ -0.78
LINC00339-201ENST00000404210 CMSS1Q9BQ75 279 aaKnown RBP10.19□□□□□ -0.78
LINC00339-201ENST00000404210 LPAR3Q9UBY5 353 aa10.19□□□□□ -0.78
LINC00339-201ENST00000404210 MRPS7Q9Y2R9 242 aaKnown RBP10.19□□□□□ -0.78
LINC00339-201ENST00000404210 DSCAML1Q8TD84 2053 aa10.19□□□□□ -0.78
LINC00339-201ENST00000404210 CR1P17927 2039 aa10.18□□□□□ -0.78
LINC00339-201ENST00000404210 MEIKINA0A087WXM9 373 aa10.18□□□□□ -0.78
LINC00339-201ENST00000404210 PPIAL4CA0A0B4J2A2 164 aa10.18□□□□□ -0.78
LINC00339-201ENST00000404210 hADV38S2A0JD32 116 aa10.18□□□□□ -0.78
LINC00339-201ENST00000404210 TMEM30CPA0ZSE6 113 aa10.18□□□□□ -0.78
LINC00339-201ENST00000404210 ODAMA1E959 279 aa10.18□□□□□ -0.78
LINC00339-201ENST00000404210 TMEM235A6NFC5 223 aa10.18□□□□□ -0.78
LINC00339-201ENST00000404210 B4DSR2 109 aa10.18□□□□□ -0.78
LINC00339-201ENST00000404210 SULT1C2O00338 296 aa10.18□□□□□ -0.78
LINC00339-201ENST00000404210 PHF1O43189 567 aaPredicted RBP10.18□□□□□ -0.78
LINC00339-201ENST00000404210 NAPSAO96009 420 aa10.18□□□□□ -0.78
LINC00339-201ENST00000404210 LIPFP07098 398 aa10.18□□□□□ -0.78
LINC00339-201ENST00000404210 GZMHP20718 246 aa10.18□□□□□ -0.78
LINC00339-201ENST00000404210 PRSS3P35030 304 aa10.18□□□□□ -0.78
LINC00339-201ENST00000404210 GZMKP49863 264 aa10.18□□□□□ -0.78
LINC00339-201ENST00000404210 GNG2P59768 71 aa10.18□□□□□ -0.78
LINC00339-201ENST00000404210 RPL31P62899 125 aaKnown RBP10.18□□□□□ -0.78
LINC00339-201ENST00000404210 MRPS15P82914 257 aaKnown RBP10.18□□□□□ -0.78
LINC00339-201ENST00000404210 ARFRP1Q13795 201 aa10.18□□□□□ -0.78
LINC00339-201ENST00000404210 EDDM3AQ14507 147 aa10.18□□□□□ -0.78
LINC00339-201ENST00000404210 SRSF7Q16629 238 aaKnown RBP eCLIP10.18□□□□□ -0.78
LINC00339-201ENST00000404210 OLFML2AQ68BL7 652 aa10.18□□□□□ -0.78
LINC00339-201ENST00000404210 PYHIN1Q6K0P9 492 aa10.18□□□□□ -0.78
LINC00339-201ENST00000404210 TPRX1Q8N7U7 411 aa10.18□□□□□ -0.78
LINC00339-201ENST00000404210 ZNF565Q8N9K5 539 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms