RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 TREM2Q9NZC2 230 aa21.59■■□□□ 1.05
CPNE1-205ENST00000401607 C9orf170A2RU37 121 aa21.58■■□□□ 1.04
CPNE1-205ENST00000401607 SRRM5B3KS81 715 aa21.58■■□□□ 1.04
CPNE1-205ENST00000401607 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP21.58■■□□□ 1.04
CPNE1-205ENST00000401607 GATA4P43694 442 aa21.58■■□□□ 1.04
CPNE1-205ENST00000401607 DHODHQ02127 395 aa21.58■■□□□ 1.04
CPNE1-205ENST00000401607 IGSF11Q5DX21 431 aa21.58■■□□□ 1.04
CPNE1-205ENST00000401607 MOGAT3Q86VF5 341 aa21.58■■□□□ 1.04
CPNE1-205ENST00000401607 C12orf45Q8N5I9 185 aaPredicted RBP21.58■■□□□ 1.04
CPNE1-205ENST00000401607 CA5BP1Q8WTZ4 195 aa21.58■■□□□ 1.04
CPNE1-205ENST00000401607 NDRG3Q9UGV2 375 aa21.58■■□□□ 1.04
CPNE1-205ENST00000401607 PSPNO60542 156 aa21.57■■□□□ 1.04
CPNE1-205ENST00000401607 SCTP09683 121 aa21.57■■□□□ 1.04
CPNE1-205ENST00000401607 ECI1P42126 302 aa21.57■■□□□ 1.04
CPNE1-205ENST00000401607 GZMKP49863 264 aa21.57■■□□□ 1.04
CPNE1-205ENST00000401607 KCNJ8Q15842 424 aa21.57■■□□□ 1.04
CPNE1-205ENST00000401607 SMIM21Q3B7S5 101 aa21.57■■□□□ 1.04
CPNE1-205ENST00000401607 NLRC3Q7RTR2 1065 aa21.57■■□□□ 1.04
CPNE1-205ENST00000401607 GAPTQ8N292 157 aa21.57■■□□□ 1.04
CPNE1-205ENST00000401607 UXS1Q8NBZ7 420 aa21.57■■□□□ 1.04
CPNE1-205ENST00000401607 PRR7Q8TB68 274 aa21.57■■□□□ 1.04
CPNE1-205ENST00000401607 FXYD6Q9H0Q3 95 aa21.57■■□□□ 1.04
CPNE1-205ENST00000401607 PIPOXQ9P0Z9 390 aa21.57■■□□□ 1.04
CPNE1-205ENST00000401607 GLS2Q9UI32 602 aa21.57■■□□□ 1.04
CPNE1-205ENST00000401607 ZDHHC8Q9ULC8 765 aa21.57■■□□□ 1.04
CPNE1-205ENST00000401607 PKD1L2Q7Z442 2459 aa21.57■■□□□ 1.04
CPNE1-205ENST00000401607 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP21.56■■□□□ 1.04
CPNE1-205ENST00000401607 TRDCB7Z8K6 153 aa21.56■■□□□ 1.04
CPNE1-205ENST00000401607 TFF1P04155 84 aa21.56■■□□□ 1.04
CPNE1-205ENST00000401607 TNFAIP6P98066 277 aaPredicted RBP21.56■■□□□ 1.04
CPNE1-205ENST00000401607 SORDQ00796 357 aa21.56■■□□□ 1.04
CPNE1-205ENST00000401607 ZNF497Q6ZNH5 498 aa21.56■■□□□ 1.04
CPNE1-205ENST00000401607 GCSAMQ8N6F7 178 aa21.56■■□□□ 1.04
CPNE1-205ENST00000401607 TRAF4Q9BUZ4 470 aaPredicted RBP21.56■■□□□ 1.04
CPNE1-205ENST00000401607 RASL12Q9NYN1 266 aa21.56■■□□□ 1.04
CPNE1-205ENST00000401607 IL19Q9UHD0 177 aa21.56■■□□□ 1.04
CPNE1-205ENST00000401607 KIR2DS1A0A191URI9 304 aa21.56■■□□□ 1.04
CPNE1-205ENST00000401607 FCGR2CP31995 323 aa21.56■■□□□ 1.04
CPNE1-205ENST00000401607 KIR2DS4P43632 304 aa21.56■■□□□ 1.04
CPNE1-205ENST00000401607 KIR2DS1Q14954 304 aa21.56■■□□□ 1.04
CPNE1-205ENST00000401607 HERPUD1Q15011 391 aa21.56■■□□□ 1.04
CPNE1-205ENST00000401607 KCNJ16Q9NPI9 418 aa21.56■■□□□ 1.04
CPNE1-205ENST00000401607 SLC23A1Q9UHI7 598 aa21.56■■□□□ 1.04
CPNE1-205ENST00000401607 RFPL4AA6NLU0 287 aa21.55■■□□□ 1.04
CPNE1-205ENST00000401607 E7EQL1 145 aa21.55■■□□□ 1.04
CPNE1-205ENST00000401607 RFPL4AL1F8VTS6 287 aa21.55■■□□□ 1.04
CPNE1-205ENST00000401607 PGAM2P15259 253 aa21.55■■□□□ 1.04
CPNE1-205ENST00000401607 RCC1P18754 421 aaPredicted RBP21.55■■□□□ 1.04
CPNE1-205ENST00000401607 IL13RA1P78552 427 aa21.55■■□□□ 1.04
CPNE1-205ENST00000401607 ATXN7L3Q14CW9 347 aaPredicted RBP21.55■■□□□ 1.04
CPNE1-205ENST00000401607 TMEM128Q5BJH2 165 aa21.55■■□□□ 1.04
CPNE1-205ENST00000401607 NEUROG1Q92886 237 aa21.55■■□□□ 1.04
CPNE1-205ENST00000401607 LRRC46Q96FV0 321 aa21.55■■□□□ 1.04
CPNE1-205ENST00000401607 IGKV1-6A0A0C4DH72 117 aa21.54■■□□□ 1.04
CPNE1-205ENST00000401607 GOSR2O14653 212 aa21.54■■□□□ 1.04
CPNE1-205ENST00000401607 VAMP1P23763 118 aa21.54■■□□□ 1.04
CPNE1-205ENST00000401607 CD34P28906 385 aa21.54■■□□□ 1.04
CPNE1-205ENST00000401607 GLP1RP43220 463 aa21.54■■□□□ 1.04
CPNE1-205ENST00000401607 TFF3Q07654 80 aa21.54■■□□□ 1.04
CPNE1-205ENST00000401607 MITD1Q8WV92 249 aa21.54■■□□□ 1.04
CPNE1-205ENST00000401607 WDR89Q96FK6 387 aaPredicted RBP21.54■■□□□ 1.04
CPNE1-205ENST00000401607 ZNF486Q96H40 463 aaPredicted RBP21.54■■□□□ 1.04
CPNE1-205ENST00000401607 DHRS9Q9BPW9 319 aa21.54■■□□□ 1.04
CPNE1-205ENST00000401607 CHIAQ9BZP6 476 aa21.54■■□□□ 1.04
CPNE1-205ENST00000401607 METRNQ9UJH8 293 aa21.54■■□□□ 1.04
CPNE1-205ENST00000401607 NBEAQ8NFP9 2946 aa21.54■■□□□ 1.04
CPNE1-205ENST00000401607 OR2A4O95047 310 aa21.53■■□□□ 1.04
CPNE1-205ENST00000401607 LHBP01229 141 aa21.53■■□□□ 1.04
CPNE1-205ENST00000401607 ADH4P08319 380 aa21.53■■□□□ 1.04
CPNE1-205ENST00000401607 NFYAP23511 347 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-205ENST00000401607 H2BFSP57053 126 aa21.53■■□□□ 1.04
CPNE1-205ENST00000401607 HLA-DRB3P79483 266 aa21.53■■□□□ 1.04
CPNE1-205ENST00000401607 MOB3AQ96BX8 217 aa21.53■■□□□ 1.04
CPNE1-205ENST00000401607 OR2A7Q96R45 310 aa21.53■■□□□ 1.04
CPNE1-205ENST00000401607 GCM1Q9NP62 436 aa21.53■■□□□ 1.04
CPNE1-205ENST00000401607 POM121CA8CG34 1229 aa21.53■■□□□ 1.04
CPNE1-205ENST00000401607 G3V3Q6 166 aa21.53■■□□□ 1.04
CPNE1-205ENST00000401607 H7C1Q1 480 aa21.53■■□□□ 1.04
CPNE1-205ENST00000401607 IFNL4K9M1U5 179 aa21.53■■□□□ 1.04
CPNE1-205ENST00000401607 SIAH2O43255 324 aa21.53■■□□□ 1.04
CPNE1-205ENST00000401607 SIX6O95475 246 aa21.53■■□□□ 1.04
CPNE1-205ENST00000401607 CTSDP07339 412 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-205ENST00000401607 CD3EP07766 207 aa21.53■■□□□ 1.04
CPNE1-205ENST00000401607 GIPP09681 153 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-205ENST00000401607 RPS2P15880 293 aaKnown RBP21.53■■□□□ 1.04
CPNE1-205ENST00000401607 AADACP22760 399 aa21.53■■□□□ 1.04
CPNE1-205ENST00000401607 TNFSF4P23510 183 aa21.53■■□□□ 1.04
CPNE1-205ENST00000401607 UQCRFS1P47985 274 aa21.53■■□□□ 1.04
CPNE1-205ENST00000401607 SUPT4H1P63272 117 aaKnown RBP21.53■■□□□ 1.04
CPNE1-205ENST00000401607 CD177Q8N6Q3 437 aa21.53■■□□□ 1.04
CPNE1-205ENST00000401607 OR5T2Q8NGG2 359 aa21.53■■□□□ 1.04
CPNE1-205ENST00000401607 PLCE1Q9P212 2302 aa21.52■■□□□ 1.04
CPNE1-205ENST00000401607 COL6A6A6NMZ7 2263 aa21.52■■□□□ 1.04
CPNE1-205ENST00000401607 C17orf100A8MU93 164 aa21.52■■□□□ 1.04
CPNE1-205ENST00000401607 SLC22A5O76082 557 aa21.52■■□□□ 1.04
CPNE1-205ENST00000401607 DUS4LO95620 317 aaKnown RBP21.52■■□□□ 1.04
CPNE1-205ENST00000401607 PSG2P11465 335 aa21.52■■□□□ 1.04
CPNE1-205ENST00000401607 ERP29P30040 261 aaKnown RBP21.52■■□□□ 1.04
CPNE1-205ENST00000401607 COL10A1Q03692 680 aa21.52■■□□□ 1.04
CPNE1-205ENST00000401607 DCAF12L2Q5VW00 463 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms