RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 OR4D5Q8NGN0 318 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 SCGB1C1Q8TD33 95 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 MOB3AQ96BX8 217 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 RPUSD4Q96CM3 377 aaKnown RBP13.08□□□□□ -0.32
CYLD-202ENST00000398568 KIR3DX1Q9H7L2 352 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 ANXA10Q9UJ72 324 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 CCDC163A0A0D9SF12 145 aa13.07□□□□□ -0.32
CYLD-202ENST00000398568 H0YGG7 62 aa13.07□□□□□ -0.32
CYLD-202ENST00000398568 FGF8P55075 233 aaPredicted RBP13.07□□□□□ -0.32
CYLD-202ENST00000398568 ARF3P61204 181 aaPredicted RBP13.07□□□□□ -0.32
CYLD-202ENST00000398568 CYP2G1PQ6ZSU1 146 aa13.07□□□□□ -0.32
CYLD-202ENST00000398568 NUP54Q7Z3B4 507 aa13.07□□□□□ -0.32
CYLD-202ENST00000398568 OR1L6Q8NGR2 347 aa13.07□□□□□ -0.32
CYLD-202ENST00000398568 SLAMF6Q96DU3 332 aa13.07□□□□□ -0.32
CYLD-202ENST00000398568 SCARF2Q96GP6 870 aaPredicted RBP13.07□□□□□ -0.32
CYLD-202ENST00000398568 ZNF552Q9H707 407 aaPredicted RBP13.07□□□□□ -0.32
CYLD-202ENST00000398568 LYRM2Q9NU23 88 aaPredicted RBP13.07□□□□□ -0.32
CYLD-202ENST00000398568 ANKUB1A6NFN9 424 aa13.07□□□□□ -0.32
CYLD-202ENST00000398568 K7EP13 123 aa13.07□□□□□ -0.32
CYLD-202ENST00000398568 MAJINQ3KP22 176 aa13.07□□□□□ -0.32
CYLD-202ENST00000398568 MRGPRGQ86SM5 289 aa13.07□□□□□ -0.32
CYLD-202ENST00000398568 OR10G6Q8NH81 332 aa13.07□□□□□ -0.32
CYLD-202ENST00000398568 ANAPC16Q96DE5 110 aa13.07□□□□□ -0.32
CYLD-202ENST00000398568 MBNL1Q9NR56 388 aaKnown RBP13.07□□□□□ -0.32
CYLD-202ENST00000398568 SLC2A9Q9NRM0 540 aa13.07□□□□□ -0.32
CYLD-202ENST00000398568 TECTAO75443 2155 aa13.07□□□□□ -0.32
CYLD-202ENST00000398568 A0A1W2PN81 502 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 NKX2-6A6NCS4 301 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 CDS2O95674 445 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 MT-ATP6P00846 226 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 HLA-HP01893 362 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 CT45A8P0DMV1 189 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 CT45A9P0DMV2 189 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 CHRNA7P36544 502 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 BAXQ07812 192 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 MMDQ15546 238 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 CT45A2Q5DJT8 189 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 FAM89BQ8N5H3 189 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 MRGPRDQ8TDS7 321 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 VN1R17PQ8TDU5 208 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 RNF133Q8WVZ7 376 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 PLK3Q9H4B4 646 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 PATZ1Q9HBE1 687 aaKnown RBP13.06□□□□□ -0.32
CYLD-202ENST00000398568 POLR1DQ9Y2S0 133 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 DOCK9Q9BZ29 2069 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 TRPM6Q9BX84 2022 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 P2RY2P41231 377 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 HNRNPA1L2Q32P51 320 aaKnown RBP13.06□□□□□ -0.32
CYLD-202ENST00000398568 TEX43Q6ZNM6 134 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 ALKBH3Q96Q83 286 aaPredicted RBP13.06□□□□□ -0.32
CYLD-202ENST00000398568 ATP5SQ99766 215 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 ZFYVE21Q9BQ24 234 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 GLRX2Q9NS18 164 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 AURKAIP1Q9NWT8 199 aaPredicted RBP13.06□□□□□ -0.32
CYLD-202ENST00000398568 SLC33A1O00400 549 aaPredicted RBP13.06□□□□□ -0.32
CYLD-202ENST00000398568 SRFP11831 508 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 PRDX4Q13162 271 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 TDRG1Q3Y452 100 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 C6orf201Q7Z4U5 140 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 OR4C5Q8NGB2 326 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 FAM3CQ92520 227 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 MSI2Q96DH6 328 aaKnown RBP13.06□□□□□ -0.32
CYLD-202ENST00000398568 DGAT2Q96PD7 388 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 RNF150Q9ULK6 438 aa13.06□□□□□ -0.32
CYLD-202ENST00000398568 PROB1E7EW31 1015 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 HCRTR2O43614 444 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 PRKNO60260 465 aaPredicted RBP13.05□□□□□ -0.32
CYLD-202ENST00000398568 UBE2V1Q13404 147 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 PRSS8Q16651 343 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 FAM57BQ71RH2 274 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 ZNF695Q8IW36 515 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 C16orf52Q8NHV5 167 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 TXN2Q99757 166 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 WWTR1Q9GZV5 400 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 CLDN16Q9Y5I7 305 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 GPR179Q6PRD1 2367 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 ZNF205O95201 554 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 CD33P20138 364 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 SRP14P37108 136 aaKnown RBP13.05□□□□□ -0.32
CYLD-202ENST00000398568 RPL23P62829 140 aaKnown RBP13.05□□□□□ -0.32
CYLD-202ENST00000398568 PAFAH1B2P68402 229 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 FMODQ06828 376 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 ZNF154Q13106 437 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.05□□□□□ -0.32
CYLD-202ENST00000398568 BTF3L4Q96K17 158 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 HDHD3Q9BSH5 251 aaPredicted RBP13.05□□□□□ -0.32
CYLD-202ENST00000398568 HIPK2Q9H2X6 1198 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 YLPM1P49750 1951 aaKnown RBP13.05□□□□□ -0.32
CYLD-202ENST00000398568 A0A0U1RQK1 487 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 ZNF320A2RRD8 509 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 FOXS1O43638 330 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 RTP5Q14D33 572 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 GAB4Q2WGN9 574 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 DMRTC1Q5HYR2 192 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 ZNF709Q8N972 641 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 ZNF845Q96IR2 970 aaPredicted RBP13.05□□□□□ -0.32
CYLD-202ENST00000398568 CCDC3Q9BQI4 270 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 PARD6GQ9BYG4 376 aaPredicted RBP13.05□□□□□ -0.32
CYLD-202ENST00000398568 RPRMQ9NS64 109 aa13.05□□□□□ -0.32
CYLD-202ENST00000398568 DECR2Q9NUI1 292 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms