RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 ENDOGQ14249 297 aaKnown RBP4.3□□□□□ -1.72
SMAD4-202ENST00000398417 SCNM1Q9BWG6 230 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 C5orf66Q9H5L9 145 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 PLEKHA3Q9HB20 300 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 UQCC1Q9NVA1 299 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 ST3GAL6Q9Y274 331 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 TET1Q8NFU7 2136 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 VAMP5O95183 116 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 CST4P01036 141 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 GLAP06280 429 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 NKX2-1P43699 371 aaPredicted RBP4.3□□□□□ -1.72
SMAD4-202ENST00000398417 MLF1P58340 268 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 RAB31Q13636 194 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 RNPS1Q15287 305 aaKnown RBP4.3□□□□□ -1.72
SMAD4-202ENST00000398417 AKR1C8PQ5T2L2 129 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 POC1AQ8NBT0 407 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 NAT6Q93015 286 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 ERGIC1Q969X5 290 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 NMES1Q9C002 83 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 SHARPINQ9H0F6 387 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 GPR35Q9HC97 309 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 GPR27Q9NS67 375 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 LHX6Q9UPM6 363 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 LOC400499M0QZD8 3231 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 A8MXK9 166 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 C1orf196B1AJZ1 125 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 HLA-HP01893 362 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 APLNRP35414 380 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 PRDX4Q13162 271 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 LTC4SQ16873 150 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 OR2B11Q5JQS5 317 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 WDSUB1Q8N9V3 476 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 OR2G3Q8NGZ4 309 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 NRIP2Q9BQI9 281 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 BET1LQ9NYM9 111 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 GHRLQ9UBU3 117 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 ST8SIA3O43173 380 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 MUC1P15941 1255 aaPredicted RBP4.3□□□□□ -1.72
SMAD4-202ENST00000398417 TBPP20226 339 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 FAHD2BQ6P2I3 314 aaPredicted RBP4.3□□□□□ -1.72
SMAD4-202ENST00000398417 FAHD2AQ96GK7 314 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 OR2H1Q9GZK4 316 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 HEYLQ9NQ87 328 aaPredicted RBP4.3□□□□□ -1.72
SMAD4-202ENST00000398417 CCL28Q9NRJ3 127 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 NDRG3Q9UGV2 375 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 NOTCH4Q99466 2003 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF320A2RRD8 509 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 MELTFP08582 738 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 FCGR3AP08637 254 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 LIFP15018 202 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 LRRC10Q5BKY1 277 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 CT83Q5H943 113 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 PRSS3P2Q8NHM4 247 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 GPHA2Q96T91 129 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 RNF126Q9BV68 326 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 PLEKHA2Q9HB19 425 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 C19orf12Q9NSK7 152 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 HS3ST3B1Q9Y662 390 aa4.3□□□□□ -1.72
SMAD4-202ENST00000398417 PTPRFP10586 1907 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 MFNGO00587 321 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 OR5AC1P0C628 307 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 AADACP22760 399 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 RPS10P46783 165 aaKnown RBP4.29□□□□□ -1.72
SMAD4-202ENST00000398417 ABHD17BQ5VST6 288 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 LINC00469Q8N7U9 141 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 SUMF2Q8NBJ7 301 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 FGFBP3Q8TAT2 258 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 CT55Q8WUE5 264 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 BLNKQ8WV28 456 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 RSRP1Q9BUV0 290 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 TGIF2Q9GZN2 237 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 NAA60Q9H7X0 242 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 C3orf85A0A1B0GTC6 90 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 OR6C6A6NF89 314 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF732B4DXR9 585 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 CD8AP01732 235 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 SUMO2P61956 95 aaKnown RBP4.29□□□□□ -1.72
SMAD4-202ENST00000398417 POLR2GP62487 172 aaKnown RBP eCLIP4.29□□□□□ -1.72
SMAD4-202ENST00000398417 RAC1P63000 192 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF468Q5VIY5 522 aaPredicted RBP4.29□□□□□ -1.72
SMAD4-202ENST00000398417 AADACL3Q5VUY0 350 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 ADAM5Q6NVV9 412 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 GLYATL2Q8WU03 294 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 STRADBQ9C0K7 418 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF107Q9UII5 783 aaPredicted RBP4.29□□□□□ -1.72
SMAD4-202ENST00000398417 ANXA10Q9UJ72 324 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 AUP1Q9Y679 476 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 A0A087WZY1 265 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 C5orf49A4QMS7 147 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 SERPINE3A8MV23 424 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 CLN5O75503 358 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 EIF3GO75821 320 aaKnown RBP eCLIP4.29□□□□□ -1.72
SMAD4-202ENST00000398417 SLC34A2O95436 690 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 FBP1P09467 338 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 CD37P11049 281 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 GSK3AP49840 483 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF133P52736 654 aaPredicted RBP4.29□□□□□ -1.72
SMAD4-202ENST00000398417 SLC16A13Q7RTY0 426 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 CARFQ8N187 725 aa4.29□□□□□ -1.72
SMAD4-202ENST00000398417 OR10D3Q8NH80 312 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms