RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 NAT8Q9UHE5 227 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 NAGKQ9UJ70 344 aa4.79□□□□□ -1.64
PTPRD-205ENST00000397611 KIF26BQ2KJY2 2108 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 TCRBV21S2A2A0A5A6 115 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 ANKRD30BLA7E2S9 258 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 VSTM5A8MXK1 200 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 FCN1O00602 326 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 FAM157CP0CG43 387 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 SLC25A6P12236 298 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 ASCL4Q6XD76 172 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 Q8NFD4 153 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 LRRC61Q9BV99 259 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 CHST5Q9GZS9 411 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 CD207Q9UJ71 328 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 ARID1BQ8NFD5 2236 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-205ENST00000397611 ADAM20O43506 726 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 IGLV3-1P01715 115 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 CFIP05156 583 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 CD5P06127 495 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 OR3A1P47881 315 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 CATR1Q13166 79 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 BSXQ3C1V8 233 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 PPP1R3CQ9UQK1 317 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 TPRP12270 2363 aaKnown RBP4.78□□□□□ -1.64
PTPRD-205ENST00000397611 H0Y8X5 98 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 COX5AP20674 150 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 SRYQ05066 204 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 HIST3H3Q16695 136 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 OR10AD1Q8NGE0 317 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 OR4A16Q8NH70 328 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 RARRES2Q99969 163 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 SF3B5Q9BWJ5 86 aaKnown RBP4.78□□□□□ -1.64
PTPRD-205ENST00000397611 ULBP2Q9BZM5 246 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 RIMS4Q9H426 269 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-205ENST00000397611 MED29Q9NX70 200 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 IGHV1OR21-1A0A087WYE8 117 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 J3QR89 54 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 C1QL1O75973 258 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 OR8U8P0C7N1 319 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 NXPH1P58417 271 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 OR8B8Q15620 311 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 DHRS11Q6UWP2 260 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 IP6K3Q96PC2 410 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 PARD6GQ9BYG4 376 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-205ENST00000397611 ZNF552Q9H707 407 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-205ENST00000397611 FGF21Q9NSA1 209 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 MYOTQ9UBF9 498 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 NAT8BQ9UHF3 227 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 STARD10Q9Y365 291 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 TMEM184BQ9Y519 407 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-205ENST00000397611 AQP7P3A6NL99 342 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 RAB29O14966 203 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 CD82P27701 267 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 IL2RGP31785 369 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 MPV17LQ2QL34 196 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 C9orf50Q5SZB4 431 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 ZNF343Q6P1L6 599 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 GJC3Q8NFK1 279 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 CNTD2Q9H8S5 307 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 RNF150Q9ULK6 438 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 SLCO1B1Q9Y6L6 691 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 A0A1W2PR80 420 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 H0YL77 283 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 ZNF205O95201 554 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 TRGC1P0CF51 173 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 PNLIPP16233 465 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 THBS3P49746 956 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 RPL24P83731 157 aaKnown RBP4.78□□□□□ -1.64
PTPRD-205ENST00000397611 ZNF154Q13106 437 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 UNC119Q13432 240 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 TMEM176BQ3YBM2 270 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-205ENST00000397611 KHDC3LQ587J8 217 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 TSPO2Q5TGU0 170 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 SLC25A47Q6Q0C1 308 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 WDR74Q6RFH5 385 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-205ENST00000397611 CYB561D1Q8N8Q1 229 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 OR2T10Q8NGZ9 312 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 C11orf40Q8WZ69 217 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 TMEM74BQ9NUR3 256 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 TRIOBPQ9H2D6 2365 aa4.78□□□□□ -1.64
PTPRD-205ENST00000397611 HEATR5AQ86XA9 2040 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 C9J4A7 227 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 OR5AC1P0C628 307 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 ZNF17P17021 662 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 OR3A4PP47883 348 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 ZNF468Q5VIY5 522 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-205ENST00000397611 C16orf82Q7Z2V1 217 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 C20orf196Q8IYI0 205 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 POC1AQ8NBT0 407 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 OR1P1Q8NH06 330 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 ASB10Q8WXI3 467 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 TP53RKQ96S44 253 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 ZFAND5O76080 213 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 MAS1LP35410 378 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 CTAG1AP78358 180 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 PDCD1Q15116 288 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 C2orf68Q2NKX9 166 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 DMRTA1Q5VZB9 504 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 STUMQ69YW2 141 aa4.77□□□□□ -1.65
PTPRD-205ENST00000397611 MYPOPQ86VE0 399 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms