RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 SDSLQ96GA7 329 aa22.97■■□□□ 1.27
CPNE1-203ENST00000397442 PPIAL4AQ9Y536 164 aa22.97■■□□□ 1.27
CPNE1-203ENST00000397442 CENPXA8MT69 81 aa22.97■■□□□ 1.27
CPNE1-203ENST00000397442 M0QYG6 137 aa22.97■■□□□ 1.27
CPNE1-203ENST00000397442 COL8A1P27658 744 aa22.97■■□□□ 1.27
CPNE1-203ENST00000397442 MDH2P40926 338 aaKnown RBP22.97■■□□□ 1.27
CPNE1-203ENST00000397442 ZNF497Q6ZNH5 498 aa22.97■■□□□ 1.27
CPNE1-203ENST00000397442 TINAGL1Q9GZM7 467 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-203ENST00000397442 AKAP6Q13023 2319 aa22.96■■□□□ 1.27
CPNE1-203ENST00000397442 TRBV6-6A0A0A6YYG2 114 aa22.96■■□□□ 1.27
CPNE1-203ENST00000397442 TRAV38-1A0A0B4J264 116 aa22.96■■□□□ 1.27
CPNE1-203ENST00000397442 GYPAP02724 150 aa22.96■■□□□ 1.27
CPNE1-203ENST00000397442 MRPS11P82912 194 aaKnown RBP22.96■■□□□ 1.27
CPNE1-203ENST00000397442 GLCCI1Q86VQ1 547 aa22.96■■□□□ 1.27
CPNE1-203ENST00000397442 ASCC1Q8N9N2 400 aaKnown RBP22.96■■□□□ 1.27
CPNE1-203ENST00000397442 MINDY2Q8NBR6 621 aa22.96■■□□□ 1.27
CPNE1-203ENST00000397442 RIMS4Q9H426 269 aaPredicted RBP22.96■■□□□ 1.27
CPNE1-203ENST00000397442 EDARQ9UNE0 448 aa22.96■■□□□ 1.27
CPNE1-203ENST00000397442 USF3Q68DE3 2245 aa22.96■■□□□ 1.27
CPNE1-203ENST00000397442 NAP1L6A6NFF2 107 aa22.95■■□□□ 1.26
CPNE1-203ENST00000397442 TNFRSF13BO14836 293 aaPredicted RBP22.95■■□□□ 1.26
CPNE1-203ENST00000397442 RAB3DO95716 219 aa22.95■■□□□ 1.26
CPNE1-203ENST00000397442 HRH1P35367 487 aa22.95■■□□□ 1.26
CPNE1-203ENST00000397442 PLA1AQ53H76 456 aa22.95■■□□□ 1.26
CPNE1-203ENST00000397442 ATPAF1Q5TC12 328 aaPredicted RBP22.95■■□□□ 1.26
CPNE1-203ENST00000397442 RSBN1Q5VWQ0 802 aaPredicted RBP22.95■■□□□ 1.26
CPNE1-203ENST00000397442 CRYBG3Q68DQ2 2970 aa22.95■■□□□ 1.26
CPNE1-203ENST00000397442 ZNF788Q6ZQV5 615 aa22.95■■□□□ 1.26
CPNE1-203ENST00000397442 ZNRF1Q8ND25 227 aa22.95■■□□□ 1.26
CPNE1-203ENST00000397442 OR4K15Q8NH41 348 aa22.95■■□□□ 1.26
CPNE1-203ENST00000397442 GAFA1Q96PS6 74 aa22.95■■□□□ 1.26
CPNE1-203ENST00000397442 CHMP1AQ9HD42 196 aaPredicted RBP22.95■■□□□ 1.26
CPNE1-203ENST00000397442 DLL4Q9NR61 685 aa22.95■■□□□ 1.26
CPNE1-203ENST00000397442 A0A1B0GW55 424 aa22.94■■□□□ 1.26
CPNE1-203ENST00000397442 DUX4L2P0CJ85 424 aa22.94■■□□□ 1.26
CPNE1-203ENST00000397442 DUX4L3P0CJ86 424 aa22.94■■□□□ 1.26
CPNE1-203ENST00000397442 DUX4L4P0CJ87 422 aa22.94■■□□□ 1.26
CPNE1-203ENST00000397442 DUX4L5P0CJ88 424 aa22.94■■□□□ 1.26
CPNE1-203ENST00000397442 DUX4L6P0CJ89 424 aa22.94■■□□□ 1.26
CPNE1-203ENST00000397442 DUX4L7P0CJ90 424 aa22.94■■□□□ 1.26
CPNE1-203ENST00000397442 TBPP20226 339 aa22.94■■□□□ 1.26
CPNE1-203ENST00000397442 ZMYND11Q15326 602 aa22.94■■□□□ 1.26
CPNE1-203ENST00000397442 ZNF880Q6PDB4 577 aa22.94■■□□□ 1.26
CPNE1-203ENST00000397442 DUX4L9Q6RFH8 374 aaPredicted RBP22.94■■□□□ 1.26
CPNE1-203ENST00000397442 CCBE1Q6UXH8 406 aaPredicted RBP22.94■■□□□ 1.26
CPNE1-203ENST00000397442 OR56B4Q8NH76 319 aa22.94■■□□□ 1.26
CPNE1-203ENST00000397442 COQ2Q96H96 371 aa22.94■■□□□ 1.26
CPNE1-203ENST00000397442 SNX22Q96L94 193 aa22.94■■□□□ 1.26
CPNE1-203ENST00000397442 CCL13Q99616 98 aa22.94■■□□□ 1.26
CPNE1-203ENST00000397442 Q9N2K0 584 aa22.94■■□□□ 1.26
CPNE1-203ENST00000397442 ING3Q9NXR8 418 aa22.94■■□□□ 1.26
CPNE1-203ENST00000397442 DUX4Q9UBX2 424 aa22.94■■□□□ 1.26
CPNE1-203ENST00000397442 NDUFS7O75251 213 aa22.93■■□□□ 1.26
CPNE1-203ENST00000397442 CSN2P05814 226 aa22.93■■□□□ 1.26
CPNE1-203ENST00000397442 ZNF735P0CB33 412 aa22.93■■□□□ 1.26
CPNE1-203ENST00000397442 SELLP14151 372 aa22.93■■□□□ 1.26
CPNE1-203ENST00000397442 DAOP14920 347 aa22.93■■□□□ 1.26
CPNE1-203ENST00000397442 FAUP35544 74 aaKnown RBP22.93■■□□□ 1.26
CPNE1-203ENST00000397442 KCNJ3P48549 501 aa22.93■■□□□ 1.26
CPNE1-203ENST00000397442 SRSF7Q16629 238 aaKnown RBP eCLIP22.93■■□□□ 1.261e-7■□□□□ 9.8
CPNE1-203ENST00000397442 Q6ZS49 121 aa22.93■■□□□ 1.26
CPNE1-203ENST00000397442 ZNF561Q8N587 486 aa22.93■■□□□ 1.26
CPNE1-203ENST00000397442 DUSP18Q8NEJ0 188 aa22.93■■□□□ 1.26
CPNE1-203ENST00000397442 MCUBQ9NWR8 336 aa22.93■■□□□ 1.26
CPNE1-203ENST00000397442 ANXA10Q9UJ72 324 aa22.93■■□□□ 1.26
CPNE1-203ENST00000397442 FAM240BA0A1B0GVZ2 78 aa22.93■■□□□ 1.26
CPNE1-203ENST00000397442 K7N7A8 449 aa22.93■■□□□ 1.26
CPNE1-203ENST00000397442 PMP2P02689 132 aa22.93■■□□□ 1.26
CPNE1-203ENST00000397442 GIFP27352 417 aa22.93■■□□□ 1.26
CPNE1-203ENST00000397442 CCR6P51684 374 aa22.93■■□□□ 1.26
CPNE1-203ENST00000397442 PAX5Q02548 391 aa22.93■■□□□ 1.26
CPNE1-203ENST00000397442 RNASE10Q5GAN6 216 aaKnown RBP22.93■■□□□ 1.26
CPNE1-203ENST00000397442 Q6ZNX1 250 aa22.93■■□□□ 1.26
CPNE1-203ENST00000397442 ENKURQ8TC29 256 aa22.93■■□□□ 1.26
CPNE1-203ENST00000397442 FSTL3O95633 263 aa22.92■■□□□ 1.26
CPNE1-203ENST00000397442 BTG1P62324 171 aa22.92■■□□□ 1.26
CPNE1-203ENST00000397442 AESQ08117 197 aa22.92■■□□□ 1.26
CPNE1-203ENST00000397442 GRK1Q15835 563 aa22.92■■□□□ 1.26
CPNE1-203ENST00000397442 SLC35E4Q6ICL7 350 aa22.92■■□□□ 1.26
CPNE1-203ENST00000397442 OR5AP2Q8NGF4 316 aa22.92■■□□□ 1.26
CPNE1-203ENST00000397442 PSMG3-AS1Q96PY0 264 aa22.92■■□□□ 1.26
CPNE1-203ENST00000397442 SLC6A7Q99884 636 aa22.92■■□□□ 1.26
CPNE1-203ENST00000397442 ZNF665Q9H7R5 613 aa22.92■■□□□ 1.26
CPNE1-203ENST00000397442 A0A1B0GVG6 124 aa22.91■■□□□ 1.26
CPNE1-203ENST00000397442 SIGLEC5O15389 551 aa22.91■■□□□ 1.26
CPNE1-203ENST00000397442 F12P00748 615 aaPredicted RBP22.91■■□□□ 1.26
CPNE1-203ENST00000397442 TK1P04183 234 aa22.91■■□□□ 1.26
CPNE1-203ENST00000397442 FAM216BQ8N7L0 139 aa22.91■■□□□ 1.26
CPNE1-203ENST00000397442 OR51S1Q8NGJ8 323 aa22.91■■□□□ 1.26
CPNE1-203ENST00000397442 DNTTIP1Q9H147 329 aa22.91■■□□□ 1.26
CPNE1-203ENST00000397442 ZNF286AQ9HBT8 521 aa22.91■■□□□ 1.26
CPNE1-203ENST00000397442 POM121CA8CG34 1229 aa22.9■■□□□ 1.26
CPNE1-203ENST00000397442 H7C1Q1 480 aa22.9■■□□□ 1.26
CPNE1-203ENST00000397442 RCC1P18754 421 aaPredicted RBP22.9■■□□□ 1.26
CPNE1-203ENST00000397442 TAS2R46P59540 309 aa22.9■■□□□ 1.26
CPNE1-203ENST00000397442 MEF2DQ14814 521 aa22.9■■□□□ 1.26
CPNE1-203ENST00000397442 ACTBL2Q562R1 376 aa22.9■■□□□ 1.26
CPNE1-203ENST00000397442 VAX1Q5SQQ9 334 aa22.9■■□□□ 1.26
CPNE1-203ENST00000397442 C5orf24Q7Z6I8 188 aa22.9■■□□□ 1.26
CPNE1-203ENST00000397442 C14orf79Q96F83 325 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms