RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 DECR2Q9NUI1 292 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 AK3Q9UIJ7 227 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 MPC1Q9Y5U8 109 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 FASNP49327 2511 aaKnown RBP12.61□□□□□ -0.39
CAPN3-207ENST00000397200 HRNRQ86YZ3 2850 aaPredicted RBP12.61□□□□□ -0.39
CAPN3-207ENST00000397200 A0A0B4J2A0 478 aa12.61□□□□□ -0.39
CAPN3-207ENST00000397200 PDCD6O75340 191 aa12.61□□□□□ -0.39
CAPN3-207ENST00000397200 PLATP00750 562 aa12.61□□□□□ -0.39
CAPN3-207ENST00000397200 ECI1P42126 302 aa12.61□□□□□ -0.39
CAPN3-207ENST00000397200 SEC61A1P61619 476 aaKnown RBP12.61□□□□□ -0.39
CAPN3-207ENST00000397200 PIGYQ3MUY2 71 aa12.61□□□□□ -0.39
CAPN3-207ENST00000397200 TMEM128Q5BJH2 165 aa12.61□□□□□ -0.39
CAPN3-207ENST00000397200 ZNF660Q6AZW8 331 aaPredicted RBP12.61□□□□□ -0.39
CAPN3-207ENST00000397200 ZNF295-AS1Q8N0V1 137 aa12.61□□□□□ -0.39
CAPN3-207ENST00000397200 ZNF680Q8NEM1 530 aa12.61□□□□□ -0.39
CAPN3-207ENST00000397200 OR51F2Q8NH61 342 aa12.61□□□□□ -0.39
CAPN3-207ENST00000397200 C14orf79Q96F83 325 aa12.61□□□□□ -0.39
CAPN3-207ENST00000397200 ELMOD3Q96FG2 381 aa12.61□□□□□ -0.39
CAPN3-207ENST00000397200 HIST1H2AAQ96QV6 131 aa12.61□□□□□ -0.39
CAPN3-207ENST00000397200 PHB2Q99623 299 aa12.61□□□□□ -0.39
CAPN3-207ENST00000397200 SULT4A1Q9BR01 284 aa12.61□□□□□ -0.39
CAPN3-207ENST00000397200 ADAT1Q9BUB4 502 aaKnown RBP12.61□□□□□ -0.39
CAPN3-207ENST00000397200 ST6GALNAC5Q9BVH7 336 aa12.61□□□□□ -0.39
CAPN3-207ENST00000397200 DYNLRB1Q9NP97 96 aa12.61□□□□□ -0.39
CAPN3-207ENST00000397200 ZNF581Q9P0T4 197 aa12.61□□□□□ -0.39
CAPN3-207ENST00000397200 SHPKQ9UHJ6 478 aa12.61□□□□□ -0.39
CAPN3-207ENST00000397200 ZNF230Q9UIE0 474 aaPredicted RBP12.61□□□□□ -0.39
CAPN3-207ENST00000397200 NOP16Q9Y3C1 178 aaKnown RBP12.61□□□□□ -0.39
CAPN3-207ENST00000397200 RAI1Q7Z5J4 1906 aaPredicted RBP12.61□□□□□ -0.39
CAPN3-207ENST00000397200 IGKV1D-8A0A087WSZ0 117 aa12.6□□□□□ -0.39
CAPN3-207ENST00000397200 TRAV14DV4A0A0A6YYC5 116 aa12.6□□□□□ -0.39
CAPN3-207ENST00000397200 RFPL4AA6NLU0 287 aa12.6□□□□□ -0.39
CAPN3-207ENST00000397200 RFPL4AL1F8VTS6 287 aa12.6□□□□□ -0.39
CAPN3-207ENST00000397200 M0R233 179 aa12.6□□□□□ -0.39
CAPN3-207ENST00000397200 GEMIN2O14893 280 aaKnown RBP12.6□□□□□ -0.39
CAPN3-207ENST00000397200 FCGR3AP08637 254 aa12.6□□□□□ -0.39
CAPN3-207ENST00000397200 NFYAP23511 347 aaPredicted RBP12.6□□□□□ -0.39
CAPN3-207ENST00000397200 HTR2BP41595 481 aa12.6□□□□□ -0.39
CAPN3-207ENST00000397200 OR3A3P47888 321 aa12.6□□□□□ -0.39
CAPN3-207ENST00000397200 IL13RA1P78552 427 aa12.6□□□□□ -0.39
CAPN3-207ENST00000397200 OPCMLQ14982 345 aa12.6□□□□□ -0.39
CAPN3-207ENST00000397200 OR8G1Q15617 311 aa12.6□□□□□ -0.39
CAPN3-207ENST00000397200 MST1LQ2TV78 715 aa12.6□□□□□ -0.39
CAPN3-207ENST00000397200 NKAPLQ5M9Q1 402 aa12.6□□□□□ -0.39
CAPN3-207ENST00000397200 C11orf88Q6PI97 169 aa12.6□□□□□ -0.39
CAPN3-207ENST00000397200 Q6ZR03 302 aa12.6□□□□□ -0.39
CAPN3-207ENST00000397200 OR8H1Q8NGG4 311 aa12.6□□□□□ -0.39
CAPN3-207ENST00000397200 OR5A2Q8NGI9 324 aa12.6□□□□□ -0.39
CAPN3-207ENST00000397200 FAAP24Q9BTP7 215 aa12.6□□□□□ -0.39
CAPN3-207ENST00000397200 CBLN4Q9NTU7 201 aa12.6□□□□□ -0.39
CAPN3-207ENST00000397200 EHFQ9NZC4 300 aa12.6□□□□□ -0.39
CAPN3-207ENST00000397200 ANXA10Q9UJ72 324 aa12.6□□□□□ -0.39
CAPN3-207ENST00000397200 ST3GAL6Q9Y274 331 aa12.6□□□□□ -0.39
CAPN3-207ENST00000397200 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.59□□□□□ -0.39
CAPN3-207ENST00000397200 ZSCAN5BA6NJL1 495 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 TPD52L2O43399 206 aaKnown RBP12.59□□□□□ -0.39
CAPN3-207ENST00000397200 TSC22D2O75157 780 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 RPA2P15927 270 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 SSTR2P30874 369 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 SWI5Q1ZZU3 235 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 CHRFAM7AQ494W8 412 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 SLC25A26Q70HW3 274 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 OR2Z1Q8NG97 314 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 GTF3AQ92664 365 aaKnown RBP12.59□□□□□ -0.39
CAPN3-207ENST00000397200 MARVELD3Q96A59 401 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 RTBDNQ9BSG5 229 aaPredicted RBP12.59□□□□□ -0.39
CAPN3-207ENST00000397200 HDHD3Q9BSH5 251 aaPredicted RBP12.59□□□□□ -0.39
CAPN3-207ENST00000397200 ZNF701Q9NV72 531 aaPredicted RBP12.59□□□□□ -0.39
CAPN3-207ENST00000397200 FBXO9Q9UK97 447 aaPredicted RBP12.59□□□□□ -0.39
CAPN3-207ENST00000397200 OR5H14A6NHG9 310 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 OR5B21A6NL26 309 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 H0YL77 283 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 L7N2F9 121 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 MLNRO43193 412 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 SFT2D2O95562 160 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 DANCRP0C864 163 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 RPS2P15880 293 aaKnown RBP12.59□□□□□ -0.39
CAPN3-207ENST00000397200 NPY4RP50391 375 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 FGF12P61328 243 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 FGL1Q08830 312 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 TMEM65Q6PI78 240 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 DTX2Q86UW9 622 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 SPERTQ8NA61 448 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 MAFIPQ8WZ33 124 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 OR5P3Q8WZ94 311 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 MICU1Q9BPX6 476 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 CMSS1Q9BQ75 279 aaKnown RBP12.59□□□□□ -0.39
CAPN3-207ENST00000397200 RTL8AQ9BWD3 113 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 MS4A5Q9H3V2 200 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 PLEKHF2Q9H8W4 249 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 RCC2Q9P258 522 aaKnown RBP12.59□□□□□ -0.39
CAPN3-207ENST00000397200 ZDHHC8Q9ULC8 765 aa12.59□□□□□ -0.39
CAPN3-207ENST00000397200 A0A1B0GWJ7 208 aa12.58□□□□□ -0.4
CAPN3-207ENST00000397200 SPRY3O43610 288 aa12.58□□□□□ -0.4
CAPN3-207ENST00000397200 SOD3P08294 240 aa12.58□□□□□ -0.4
CAPN3-207ENST00000397200 SLC25A4P12235 298 aa12.58□□□□□ -0.4
CAPN3-207ENST00000397200 NPBWR2P48146 333 aa12.58□□□□□ -0.4
CAPN3-207ENST00000397200 GMFBP60983 142 aa12.58□□□□□ -0.4
CAPN3-207ENST00000397200 SUPT4H1P63272 117 aaKnown RBP12.58□□□□□ -0.4
CAPN3-207ENST00000397200 MZT1Q08AG7 82 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms