RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 OR5C1Q8NGR4 320 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 SLC2A12Q8TD20 617 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 ERGIC1Q969X5 290 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 TM4SF18Q96CE8 201 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 IMMP2LQ96T52 175 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 UTP23Q9BRU9 249 aaKnown RBP7.43□□□□□ -1.22
NDE1-202ENST00000396355 ADGRL4Q9HBW9 690 aa7.43□□□□□ -1.22
NDE1-202ENST00000396355 ARRDC5A6NEK1 342 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 FAM166BA8MTA8 275 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 C4orf51C9J302 202 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 EIF4E2O60573 245 aaKnown RBP7.42□□□□□ -1.22
NDE1-202ENST00000396355 SAP30O75446 220 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 CD5P06127 495 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 CT45A8P0DMV1 189 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 CT45A9P0DMV2 189 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 GZMHP20718 246 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 CEACAM3P40198 252 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 GFRA1P56159 465 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 CCL20P78556 96 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 MEP1BQ16820 701 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 CT45A2Q5DJT8 189 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 FFAR4Q5NUL3 377 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 PLCXD3Q63HM9 321 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 ANKRD16Q6P6B7 361 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 DHRS13Q6UX07 377 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 TMEM229BQ8NBD8 167 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 RERGQ96A58 199 aaPredicted RBP7.42□□□□□ -1.22
NDE1-202ENST00000396355 MOB3AQ96BX8 217 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 ZNF665Q9H7R5 613 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 Q9N2K0 584 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 FOXD3Q9UJU5 478 aaPredicted RBP7.42□□□□□ -1.22
NDE1-202ENST00000396355 RFNGQ9Y644 331 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 C2orf16Q68DN1 1984 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 AHCTF1Q8WYP5 2266 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 NSG1A0A0A6YYJ2 146 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 A0A1W2PPV9 198 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 C1QTNF9BB2RNN3 333 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 PATE3B3GLJ2 98 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 ISLRO14498 428 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 MELTFP08582 738 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 C1QTNF9P0C862 333 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 GABRA3P34903 492 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 OPRM1P35372 400 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 TCL1AP56279 114 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 RELBQ01201 579 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 MFGE8Q08431 387 aaPredicted RBP7.42□□□□□ -1.22
NDE1-202ENST00000396355 GAB4Q2WGN9 574 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 TDRG1Q3Y452 100 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 DMKNQ6E0U4 476 aaPredicted RBP7.42□□□□□ -1.22
NDE1-202ENST00000396355 LINC00696Q6ZRV3 163 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 NRSN1Q8IZ57 195 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 LINC00615Q96LM1 132 aaPredicted RBP7.42□□□□□ -1.22
NDE1-202ENST00000396355 LMF2Q9BU23 707 aaKnown RBP7.42□□□□□ -1.22
NDE1-202ENST00000396355 MS4A8Q9BY19 250 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 C20orf141Q9NUB4 165 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 THYN1Q9P016 225 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 SS18L2Q9UHA2 77 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 B3GALT5Q9Y2C3 310 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 IGKV1-8A0A0C4DH67 115 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 H0YIZ8 118 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 ERGP11308 486 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 ZNF85Q03923 595 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 ZNF154Q13106 437 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 SLC35E3Q7Z769 313 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 BATF2Q8N1L9 274 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 LINC01555Q8NAE3 123 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 OR4B1Q8NGF8 309 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 SIGMAR1Q99720 223 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 CALHM2Q9HA72 323 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 PLEKHA2Q9HB19 425 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 PLEKHJ1Q9NW61 149 aa7.42□□□□□ -1.22
NDE1-202ENST00000396355 MPDZO75970 2070 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 ARRB1P49407 418 aaPredicted RBP7.41□□□□□ -1.22
NDE1-202ENST00000396355 RNASEKQ6P5S7 137 aaKnown RBP7.41□□□□□ -1.22
NDE1-202ENST00000396355 FAM57BQ71RH2 274 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 ADGRE4PQ86SQ3 457 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 IFI44Q8TCB0 444 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 FGF11Q92914 225 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 FGGYQ96C11 551 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 SMIM8Q96KF7 97 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 SGCZQ96LD1 299 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 SYT3Q9BQG1 590 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 ACTR3CQ9C0K3 210 aaPredicted RBP7.41□□□□□ -1.22
NDE1-202ENST00000396355 A4GALTQ9NPC4 353 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 HSPB7Q9UBY9 170 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 ZNF292O60281 2723 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 SCN3AQ9NY46 2000 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 TRAV26-1A0A087WT03 109 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 A0A0G2JK05 382 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 OR10J4P0C629 311 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 NPY1RP25929 384 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 ATP6V0CP27449 155 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 BLVRBP30043 206 aaPredicted RBP7.41□□□□□ -1.22
NDE1-202ENST00000396355 NKX2-1P43699 371 aaPredicted RBP7.41□□□□□ -1.22
NDE1-202ENST00000396355 IER3P46695 156 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 BAXQ07812 192 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 DEFB134Q4QY38 66 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 BTNL8Q6UX41 500 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 ZNF841Q6ZN19 808 aa7.41□□□□□ -1.22
NDE1-202ENST00000396355 SLC25A42Q86VD7 318 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms