RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 SCTP09683 121 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 BMP5P22003 454 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 CD27P26842 260 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 BEND4Q6ZU67 534 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 PP6455Q8WZ26 134 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 MRGPRX4Q96LA9 322 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 HS3ST6Q96QI5 342 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 TSTD3H0UI37 97 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 SOX15O60248 233 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 ERVS71-1P61550 626 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 HLA-DRB3P79483 266 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 PLCXD3Q63HM9 321 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 SLC25A26Q70HW3 274 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 GPR137CQ8N3F9 429 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 D2HGDHQ8N465 521 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 OR4D5Q8NGN0 318 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 CEBPZOSA8MTT3 80 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 CYTIPO60759 359 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 CCL2P13500 99 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 ZNF16P17020 682 aaPredicted RBP12.36□□□□□ -0.43
CLIP2-203ENST00000395060 IL2RGP31785 369 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 ALDH3B1P43353 468 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 SUCLG1P53597 346 aaKnown RBP12.36□□□□□ -0.43
CLIP2-203ENST00000395060 CASP6P55212 293 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 ADIRFQ15847 76 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 IGFBP7Q16270 282 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 SSX2Q16385 188 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 ZNF818PQ6ZRF7 136 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 C1QL4Q86Z23 238 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 CALHM1Q8IU99 346 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 OSR2Q8N2R0 312 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 OR1K1Q8NGR3 316 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 CABLES2Q9BTV7 478 aa12.36□□□□□ -0.43
CLIP2-203ENST00000395060 IGKV1D-13A0A0B4J2D9 117 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 IGKV1-13P0DP09 117 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 SRFP11831 508 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 SLC16A14Q7RTX9 510 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 TGIF2LXQ8IUE1 241 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 OIT3Q8WWZ8 545 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 GTF3AQ92664 365 aaKnown RBP12.35□□□□□ -0.43
CLIP2-203ENST00000395060 OR6C1Q96RD1 312 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 PLEKHF2Q9H8W4 249 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 CCL28Q9NRJ3 127 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 KIAA1456Q9P272 454 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 CHD3Q12873 2000 aaKnown RBP12.35□□□□□ -0.43
CLIP2-203ENST00000395060 IGHV3-64DA0A0J9YX35 117 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 TNFSF11O14788 317 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 RRP8O43159 456 aaKnown RBP12.35□□□□□ -0.43
CLIP2-203ENST00000395060 NRASP01111 189 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 GLIPR1P48060 266 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 MALLQ13021 153 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 RTP5Q14D33 572 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 ARL6IP1Q15041 203 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 SHBQ15464 509 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 TESK1Q15569 626 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 LILRB2Q8N423 598 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 IL22RA1Q8N6P7 574 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 CLDND2Q8NHS1 167 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 HIST1H2BLQ99880 126 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 GPR27Q9NS67 375 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 AURKAIP1Q9NWT8 199 aaPredicted RBP12.35□□□□□ -0.43
CLIP2-203ENST00000395060 MYOTQ9UBF9 498 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 ASPMQ8IZT6 3477 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 TNRC18O15417 2968 aaPredicted RBP12.35□□□□□ -0.43
CLIP2-203ENST00000395060 A0A1W2PR77 199 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 DHHO43323 396 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 IGLV3-19P01714 112 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 ECI1P42126 302 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 PRSS8Q16651 343 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 C1orf87Q8N0U7 546 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 IL1F10Q8WWZ1 152 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 DEFB126Q9BYW3 111 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 PISDQ9UG56 409 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 V9GYS6 101 aa12.35□□□□□ -0.43
CLIP2-203ENST00000395060 TRDCB7Z8K6 153 aa12.34□□□□□ -0.43
CLIP2-203ENST00000395060 METTL15P1P0C7V9 234 aa12.34□□□□□ -0.43
CLIP2-203ENST00000395060 PTGDSP41222 190 aa12.34□□□□□ -0.43
CLIP2-203ENST00000395060 HLA-BQ31612 363 aa12.34□□□□□ -0.43
CLIP2-203ENST00000395060 PLXDC1Q8IUK5 500 aa12.34□□□□□ -0.43
CLIP2-203ENST00000395060 OR2M3Q8NG83 312 aa12.34□□□□□ -0.43
CLIP2-203ENST00000395060 SPTSSAQ969W0 71 aa12.34□□□□□ -0.43
CLIP2-203ENST00000395060 RPUSD4Q96CM3 377 aaKnown RBP12.34□□□□□ -0.43
CLIP2-203ENST00000395060 ZNF501Q96CX3 271 aaPredicted RBP12.34□□□□□ -0.43
CLIP2-203ENST00000395060 MVB12AQ96EY5 273 aa12.34□□□□□ -0.43
CLIP2-203ENST00000395060 WASF3Q9UPY6 502 aa12.34□□□□□ -0.43
CLIP2-203ENST00000395060 TMED3Q9Y3Q3 217 aa12.34□□□□□ -0.43
CLIP2-203ENST00000395060 CACNA1DQ01668 2161 aa12.34□□□□□ -0.43
CLIP2-203ENST00000395060 DUX1O43812 170 aa12.34□□□□□ -0.43
CLIP2-203ENST00000395060 MLF1P58340 268 aa12.34□□□□□ -0.43
CLIP2-203ENST00000395060 HNRNPKP61978 463 aaKnown RBP eCLIP12.34□□□□□ -0.432e-6■■■■■ 31.7
CLIP2-203ENST00000395060 CLN3Q13286 438 aa12.34□□□□□ -0.43
CLIP2-203ENST00000395060 SSX7Q7RTT5 188 aa12.34□□□□□ -0.43
CLIP2-203ENST00000395060 ODF3L1Q8IXM7 274 aa12.34□□□□□ -0.43
CLIP2-203ENST00000395060 ZNF100Q8IYN0 542 aa12.34□□□□□ -0.43
CLIP2-203ENST00000395060 CCDC71LQ8N9Z2 235 aa12.34□□□□□ -0.43
CLIP2-203ENST00000395060 MOB3AQ96BX8 217 aa12.34□□□□□ -0.43
CLIP2-203ENST00000395060 SLC25A31Q9H0C2 315 aa12.34□□□□□ -0.43
CLIP2-203ENST00000395060 COL4A2P08572 1712 aa12.34□□□□□ -0.43
CLIP2-203ENST00000395060 A0A0G2JRQ6 117 aa12.33□□□□□ -0.44
CLIP2-203ENST00000395060 GALR2O43603 387 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms