RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 RASL12Q9NYN1 266 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 MGAT4CQ9UBM8 478 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 RNF115Q9Y4L5 304 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 USP24Q9UPU5 2620 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 CACNA1DQ01668 2161 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 HIVEP3Q5T1R4 2406 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 TRAV39A0A0B4J263 110 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 KIR2DS1A0A191URI9 304 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 TRDCB7Z8K6 153 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 SMLR1H3BR10 107 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 H7C1Q1 480 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 M0R233 179 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 BET1O15155 118 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 FABP7O15540 132 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 ZG16O60844 167 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 PLAUP00749 431 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 HLA-AP01891 365 aaKnown RBP7.28□□□□□ -1.24
TDP1-203ENST00000393454 SCTP09683 121 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 SULT1A3P0DMM9 295 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 SULT1A4P0DMN0 295 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 PI3P19957 117 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 VAMP1P23763 118 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 FPR2P25090 351 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 FCGR2CP31995 323 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 KIR2DS4P43632 304 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 GABRA2P47869 451 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 FXYD4P59646 89 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 CCL8P80075 99 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 COL10A1Q03692 680 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 KIR2DS1Q14954 304 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 IGSF11Q5DX21 431 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 AADACL3Q5VUY0 350 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 C20orf204Q6ZNR8 217 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 LHFPL1Q86WI0 220 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 ZCCHC24Q8N2G6 241 aaKnown RBP7.28□□□□□ -1.24
TDP1-203ENST00000393454 OR11L1Q8NGX0 322 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 PLPPR1Q8TBJ4 325 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 TOMM40LQ969M1 308 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 PIK3IP1Q96FE7 263 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 CNTNAP3BQ96NU0 1288 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 CNTNAP3Q9BZ76 1288 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 CHIAQ9BZP6 476 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 GCM1Q9NP62 436 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 DYNLRB1Q9NP97 96 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 DECR2Q9NUI1 292 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 TRAPPC2LQ9UL33 140 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 GPR132Q9UNW8 380 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 C14orf166Q9Y224 244 aaKnown RBP7.28□□□□□ -1.24
TDP1-203ENST00000393454 WIPI2Q9Y4P8 454 aa7.28□□□□□ -1.24
TDP1-203ENST00000393454 ANKHD1Q8IWZ3 2542 aaKnown RBP7.27□□□□□ -1.25
TDP1-203ENST00000393454 C17orf100A8MU93 164 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 SRRM5B3KS81 715 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 CLDN14O95500 239 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 CYB5R3P00387 301 aaPredicted RBP7.27□□□□□ -1.25
TDP1-203ENST00000393454 ANXA3P12429 323 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 IRF2P14316 349 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 RCC1P18754 421 aaPredicted RBP7.27□□□□□ -1.25
TDP1-203ENST00000393454 NFYAP23511 347 aaPredicted RBP7.27□□□□□ -1.25
TDP1-203ENST00000393454 APOBEC3AP31941 199 aaPredicted RBP7.27□□□□□ -1.25
TDP1-203ENST00000393454 PRDX2P32119 198 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 GATA4P43694 442 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 TAS2R31P59538 309 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 IL13RA1P78552 427 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 DHRS2Q13268 280 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 PPP1R1AQ13522 171 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 SRSF7Q16629 238 aaKnown RBP eCLIP7.27□□□□□ -1.25
TDP1-203ENST00000393454 DHRS11Q6UWP2 260 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 ZNF497Q6ZNH5 498 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 Q6ZS49 121 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 LYG2Q86SG7 212 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 TCTE3Q8IZS6 198 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 C12orf45Q8N5I9 185 aaPredicted RBP7.27□□□□□ -1.25
TDP1-203ENST00000393454 GCSAMQ8N6F7 178 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 ASCC1Q8N9N2 400 aaKnown RBP7.27□□□□□ -1.25
TDP1-203ENST00000393454 CASTOR1Q8WTX7 329 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 DIRC2Q96SL1 478 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 ZNF436Q9C0F3 470 aaPredicted RBP7.27□□□□□ -1.25
TDP1-203ENST00000393454 C5orf66Q9H5L9 145 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 MYOZ1Q9NP98 299 aaPredicted RBP7.27□□□□□ -1.25
TDP1-203ENST00000393454 CISD1Q9NZ45 108 aaKnown RBP7.27□□□□□ -1.25
TDP1-203ENST00000393454 RNF7Q9UBF6 113 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 METRNQ9UJH8 293 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 PPP1R3CQ9UQK1 317 aa7.27□□□□□ -1.25
TDP1-203ENST00000393454 TRBV6-6A0A0A6YYG2 114 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 FAM172BPA6NC97 362 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 GOSR2O14653 212 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 PSPNO60542 156 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 TK1P04183 234 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 ZNF728P0DKX0 622 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 PSG2P11465 335 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 TNFRSF1AP19438 455 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 CD34P28906 385 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 CD80P33681 288 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 CFHR2P36980 270 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 ECI1P42126 302 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 HERV-K104P61576 105 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 TFF3Q07654 80 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 FAM201AQ5SY85 155 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 C11orf88Q6PI97 169 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 CD177Q8N6Q3 437 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms