RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 CLDN16Q9Y5I7 305 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 RP1P56715 2156 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 LNP1A1A4G5 178 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 IL33O95760 270 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 DMRTC1Q5HYR2 192 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 RTL6Q6ICC9 239 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 C6orf201Q7Z4U5 140 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 CENPVQ7Z7K6 275 aaPredicted RBP12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 H1FOOQ8IZA3 346 aaPredicted RBP12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 GPR119Q8TDV5 335 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 ADOQ96SZ5 270 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 OR2J1Q9GZK6 312 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 LYRM2Q9NU23 88 aaPredicted RBP12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 NXT1Q9UKK6 140 aaKnown RBP12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 HS3ST3A1Q9Y663 406 aa12.72□□□□□ -0.37
VPS9D1-201ENST00000389386 HCRTR2O43614 444 aa12.71□□□□□ -0.37
VPS9D1-201ENST00000389386 CST7O76096 145 aa12.71□□□□□ -0.37
VPS9D1-201ENST00000389386 CLPSP04118 112 aa12.71□□□□□ -0.37
VPS9D1-201ENST00000389386 IGLV3-21P80748 117 aaPredicted RBP12.71□□□□□ -0.37
VPS9D1-201ENST00000389386 CRIP3Q6Q6R5 217 aa12.71□□□□□ -0.37
VPS9D1-201ENST00000389386 ABHD12BQ7Z5M8 362 aaPredicted RBP12.71□□□□□ -0.37
VPS9D1-201ENST00000389386 COMMD2Q86X83 199 aa12.71□□□□□ -0.37
VPS9D1-201ENST00000389386 MAFAQ8NHW3 353 aaPredicted RBP12.71□□□□□ -0.37
VPS9D1-201ENST00000389386 C22orf15Q8WYQ4 148 aa12.71□□□□□ -0.37
VPS9D1-201ENST00000389386 TBX15Q96SF7 602 aa12.71□□□□□ -0.37
VPS9D1-201ENST00000389386 C20orf144Q9BQM9 153 aa12.71□□□□□ -0.37
VPS9D1-201ENST00000389386 LRRC61Q9BV99 259 aa12.71□□□□□ -0.37
VPS9D1-201ENST00000389386 ZNF665Q9H7R5 613 aa12.71□□□□□ -0.37
VPS9D1-201ENST00000389386 SLC2A9Q9NRM0 540 aa12.71□□□□□ -0.37
VPS9D1-201ENST00000389386 THADAQ6YHU6 1953 aa12.71□□□□□ -0.37
VPS9D1-201ENST00000389386 NKX2-6A6NCS4 301 aa12.71□□□□□ -0.38
VPS9D1-201ENST00000389386 A8MXE2 369 aa12.71□□□□□ -0.38
VPS9D1-201ENST00000389386 TNFSF10P50591 281 aa12.71□□□□□ -0.38
VPS9D1-201ENST00000389386 ACOT6Q3I5F7 207 aaPredicted RBP12.71□□□□□ -0.38
VPS9D1-201ENST00000389386 SLC38A9Q8NBW4 561 aa12.71□□□□□ -0.38
VPS9D1-201ENST00000389386 TSTD1Q8NFU3 115 aa12.71□□□□□ -0.38
VPS9D1-201ENST00000389386 RNASE8Q8TDE3 154 aaKnown RBP12.71□□□□□ -0.38
VPS9D1-201ENST00000389386 OIT3Q8WWZ8 545 aa12.71□□□□□ -0.38
VPS9D1-201ENST00000389386 C11orf40Q8WZ69 217 aa12.71□□□□□ -0.38
VPS9D1-201ENST00000389386 TM2D1Q9BX74 207 aa12.71□□□□□ -0.38
VPS9D1-201ENST00000389386 PARD6AQ9NPB6 346 aa12.71□□□□□ -0.38
VPS9D1-201ENST00000389386 ZFP30Q9Y2G7 519 aa12.71□□□□□ -0.38
VPS9D1-201ENST00000389386 TTC28Q96AY4 2481 aa12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 WNT5AP41221 380 aa12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 GALR1P47211 349 aa12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 TAS2R30P59541 319 aa12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 TIPARPQ7Z3E1 657 aaKnown RBP12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 OOSP2Q86WS3 158 aa12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 IL22RA1Q8N6P7 574 aa12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 KLHDC7BQ96G42 594 aa12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 FAM71F1Q96KD3 344 aaPredicted RBP12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 P2RX4Q99571 388 aa12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 DNAJC4Q9NNZ3 241 aa12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 ZNF319Q9P2F9 582 aa12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 CHD3Q12873 2000 aaKnown RBP12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 ZNF705FA8MVS1 300 aaPredicted RBP12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 ZNF705DP0CH99 300 aaPredicted RBP12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 ZNF705BP0CI00 300 aaPredicted RBP12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 ANOS1P23352 680 aa12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 NKX2-1P43699 371 aaPredicted RBP12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 FXYD4P59646 89 aa12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 KISS1Q15726 138 aa12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 ADIRFQ15847 76 aa12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 ZNF100Q8IYN0 542 aa12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 ASB10Q8WXI3 467 aa12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 FAM122AQ96E09 287 aa12.7□□□□□ -0.38
VPS9D1-201ENST00000389386 TMED7-TICAM2A0A0A6YYA0 188 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 PHF1O43189 567 aaPredicted RBP12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 TNFSF13O75888 250 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 CDS2O95674 445 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 HNF1AP20823 631 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 TMEM217Q8N7C4 229 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 SUMF1Q8NBK3 374 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 OR8B12Q8NGG6 310 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 OR11L1Q8NGX0 322 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 ZNF845Q96IR2 970 aaPredicted RBP12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 KCNK17Q96T54 332 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 PCED1AQ9H1Q7 454 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 GPR35Q9HC97 309 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 Q9N2K0 584 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 NAT8Q9UHE5 227 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 PRSS50Q9UI38 385 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 ZNF850A8MQ14 1090 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 ITGB1BP1O14713 200 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 SSSCA1O60232 199 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 NUDT14O95848 222 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 UMODP07911 640 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 GP1BBP13224 206 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 RRADP55042 308 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 MTCP1P56278 107 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 PRDX4Q13162 271 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 CLEC12BQ2HXU8 276 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 SYT13Q7L8C5 426 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 NUFIP2Q7Z417 695 aaKnown RBP12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 D2HGDHQ8N465 521 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 MS4A10Q96PG2 267 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 ELOVL1Q9BW60 279 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 MAGT1Q9H0U3 335 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 GAL3ST2Q9H3Q3 398 aa12.69□□□□□ -0.38
VPS9D1-201ENST00000389386 MSL2Q9HCI7 577 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms