RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 ZSCAN5BA6NJL1 495 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 A8MXE2 369 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 H0YIZ8 118 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 RGS13O14921 159 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 RRP8O43159 456 aaKnown RBP8.59□□□□□ -1.03
LTN1-203ENST00000389195 DSCAMO60469 2012 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 SCGB1D2O95969 90 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 CRYABP02511 175 aaKnown RBP8.59□□□□□ -1.03
LTN1-203ENST00000389195 RAP2BP61225 183 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 ZNF324BQ6AW86 544 aaPredicted RBP8.59□□□□□ -1.03
LTN1-203ENST00000389195 BEND4Q6ZU67 534 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 LYZL2Q7Z4W2 148 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 FGFRL1Q8N441 504 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 ARRDC1Q8N5I2 433 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 DEFB108BQ8NET1 73 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 MRPL24Q96A35 216 aaKnown RBP8.59□□□□□ -1.03
LTN1-203ENST00000389195 SPG11Q96JI7 2443 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 ALX4Q9H161 411 aaPredicted RBP8.59□□□□□ -1.03
LTN1-203ENST00000389195 MBD2Q9UBB5 411 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 HSF4Q9ULV5 492 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 MPC1Q9Y5U8 109 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 TRGV8A0A0C4DH27 118 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 RFPL4AA6NLU0 287 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 RFPL4AL1F8VTS6 287 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 M0R233 179 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 EGR1P18146 543 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 S100A10P60903 97 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 PAN3Q58A45 887 aaKnown RBP8.59□□□□□ -1.03
LTN1-203ENST00000389195 UTF1Q5T230 341 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 ZDHHC22Q8N966 263 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 RRNAD1Q96FB5 475 aaKnown RBP8.59□□□□□ -1.03
LTN1-203ENST00000389195 CPNE2Q96FN4 548 aaPredicted RBP8.59□□□□□ -1.03
LTN1-203ENST00000389195 MFFQ9GZY8 342 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.59□□□□□ -1.03
LTN1-203ENST00000389195 NECAP2Q9NVZ3 263 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 OR5AC2Q9NZP5 309 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 RNF150Q9ULK6 438 aa8.59□□□□□ -1.03
LTN1-203ENST00000389195 IGHV3-43A0A0B4J1X8 118 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 MSGN1A6NI15 193 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 DEFB108AA8MXU0 73 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 PRRG2O14669 202 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 DUS4LO95620 317 aaKnown RBP8.58□□□□□ -1.04
LTN1-203ENST00000389195 DIRAS3O95661 229 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 ZNF728P0DKX0 622 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 IGHV3-43DP0DP04 118 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 RAC2P15153 192 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 FPR2P25090 351 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 GCH1P30793 250 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 ASCL1P50553 236 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 ERVFRD-1P60508 538 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 PPA1Q15181 289 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 ADAM5Q6NVV9 412 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 TMUB2Q71RG4 321 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 OR8G5Q8NG78 346 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 COQ8AQ8NI60 647 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 LHFPL5Q8TAF8 219 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 MRPL30Q8TCC3 161 aaKnown RBP8.58□□□□□ -1.04
LTN1-203ENST00000389195 TP53RKQ96S44 253 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 RTL8AQ9BWD3 113 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 CCL28Q9NRJ3 127 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 EPG5Q9HCE0 2579 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 B8ZZF3 427 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 SFT2D2O95562 160 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 OMGP23515 440 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 EDDM3AQ14507 147 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 ZBTB37Q5TC79 503 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 Q6P435 159 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 ZNF818PQ6ZRF7 136 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 CCDC54Q8NEL0 328 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 RTN4IP1Q8WWV3 396 aaPredicted RBP8.58□□□□□ -1.04
LTN1-203ENST00000389195 MUCL1Q96DR8 90 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 SLA2Q9H6Q3 261 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 ZNF286AQ9HBT8 521 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 SLC2A9Q9NRM0 540 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 C1orf123Q9NWV4 160 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 IL36GQ9NZH8 169 aa8.58□□□□□ -1.04
LTN1-203ENST00000389195 ZNF107Q9UII5 783 aaPredicted RBP8.58□□□□□ -1.04
LTN1-203ENST00000389195 PPYP01298 95 aa8.57□□□□□ -1.04
LTN1-203ENST00000389195 IGLV1-44P01699 117 aa8.57□□□□□ -1.04
LTN1-203ENST00000389195 GNRHRP30968 328 aa8.57□□□□□ -1.04
LTN1-203ENST00000389195 CBX5P45973 191 aa8.57□□□□□ -1.04
LTN1-203ENST00000389195 RAB32Q13637 225 aa8.57□□□□□ -1.04
LTN1-203ENST00000389195 P2RY6Q15077 328 aa8.57□□□□□ -1.04
LTN1-203ENST00000389195 ABCA11PQ4W5N1 156 aa8.57□□□□□ -1.04
LTN1-203ENST00000389195 WDR82Q6UXN9 313 aa8.57□□□□□ -1.04
LTN1-203ENST00000389195 PEG10Q86TG7 708 aaKnown RBP8.57□□□□□ -1.04
LTN1-203ENST00000389195 Q9N2K0 584 aa8.57□□□□□ -1.04
LTN1-203ENST00000389195 C14orf166Q9Y224 244 aaKnown RBP8.57□□□□□ -1.04
LTN1-203ENST00000389195 MYO18BQ8IUG5 2567 aa8.57□□□□□ -1.04
LTN1-203ENST00000389195 IQCF6A8MYZ5 107 aa8.57□□□□□ -1.04
LTN1-203ENST00000389195 J3QT63 122 aa8.57□□□□□ -1.04
LTN1-203ENST00000389195 SIGLEC5O15389 551 aa8.57□□□□□ -1.04
LTN1-203ENST00000389195 PHF1O43189 567 aaPredicted RBP8.57□□□□□ -1.04
LTN1-203ENST00000389195 NAPSAO96009 420 aa8.57□□□□□ -1.04
LTN1-203ENST00000389195 RLN2P04090 185 aa8.57□□□□□ -1.04
LTN1-203ENST00000389195 CCL8P80075 99 aa8.57□□□□□ -1.04
LTN1-203ENST00000389195 IL24Q13007 206 aa8.57□□□□□ -1.04
LTN1-203ENST00000389195 FAM76BQ5HYJ3 339 aa8.57□□□□□ -1.04
LTN1-203ENST00000389195 RGS7BPQ6MZT1 257 aaPredicted RBP8.57□□□□□ -1.04
LTN1-203ENST00000389195 C11orf87Q6NUJ2 197 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms