RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 ERC2-IT1O76042 136 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 TXNDC12O95881 172 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 HLA-DRB1P01911 266 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 ATP1B1P05026 303 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 C8GP07360 202 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 PRSS1P07477 247 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 HIST1H2AGP0C0S8 130 aaPredicted RBP0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 OR9G9P0C7N8 305 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 UBTFL6P0CB48 400 aaPredicted RBP0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 HIST1H2ADP20671 130 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 GALP22466 123 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 IMPA1P29218 277 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 OPRL1P41146 370 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 KRT6CP48668 564 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 RAP1GDS1P52306 607 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 CRISP1P54107 249 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 PAX9P55771 341 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 TIRAPP58753 221 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 RPL7AP62424 266 aaKnown RBP0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 CX3CL1P78423 397 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 MRPS35P82673 323 aaKnown RBP0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 CDKL1Q00532 357 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 REEP5Q00765 189 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 COX6A2Q02221 97 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 LRRC63Q05C16 580 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 EIF2B1Q14232 305 aaKnown RBP0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 PLGLAQ15195 96 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 RSU1Q15404 277 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 MMDQ15546 238 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 NDUFAF6Q330K2 333 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 KRTAP19-8Q3LI54 63 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 ADPRMQ3LIE5 342 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 RBM48Q5RL73 367 aaKnown RBP0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 LY6G6FQ5SQ64 297 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 C1orf220Q5T0J3 134 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 GRHL2Q6ISB3 625 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 SLC22A9Q8IVM8 553 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 PEX5LQ8IYB4 626 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 CLEC4FQ8N1N0 589 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 CBR4Q8N4T8 237 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 C4orf32Q8N8J7 132 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 TMEM35BQ8NCS4 154 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 OR52K1Q8NGK4 314 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 OR52M1Q8NGK5 317 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 OR13C4Q8NGS5 318 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 OR8S1Q8NH09 359 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 SPATA22Q8NHS9 363 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 KCNG3Q8TAE7 436 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 PNPT1Q8TCS8 783 aaKnown RBP0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 ST8SIA2Q92186 375 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 ZNF669Q96BR6 464 aaPredicted RBP0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 ERP27Q96DN0 273 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 MS4A14Q96JA4 679 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 HIST1H2AHQ96KK5 128 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 MRGPRX2Q96LB1 330 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 IGF2BP2-AS1Q96M15 143 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 TSNARE1Q96NA8 513 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 MCEEQ96PE7 176 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 TSGA13Q96PP4 275 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 LITAFQ99732 161 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 HIST1H2AJQ99878 128 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 H2AFJQ9BTM1 129 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 PAPOLGQ9BWT3 736 aaKnown RBP0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 ANKRD60Q9BZ19 345 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 SLC25A39Q9BZJ4 359 aaPredicted RBP0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 PIGUQ9H490 435 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 SLCO1B3Q9NPD5 702 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 PFDN4Q9NQP4 134 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 CTPS2Q9NRF8 586 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 MRGBPQ9NV56 204 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 RDH8Q9NYR8 311 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 NDUFA13Q9P0J0 144 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 DOK5Q9P104 306 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 FAM153AQ9UHL3 310 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 BAIAP2L1Q9UHR4 511 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 EXOSC1Q9Y3B2 195 aaKnown RBP0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 TIMM10BQ9Y5J6 103 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 TIMM8BQ9Y5J9 83 aaPredicted RBP0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 ETV7Q9Y603 341 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 KCNE2Q9Y6J6 123 aa0.35□□□□□ -2.35
RNU6-42P-201ENST00000384165 A0A087WUV0 522 aaPredicted RBP0.34□□□□□ -2.36
RNU6-42P-201ENST00000384165 IGHV1-3A0A0C4DH29 117 aa0.34□□□□□ -2.36
RNU6-42P-201ENST00000384165 C9orf92A6NGG3 77 aa0.34□□□□□ -2.36
RNU6-42P-201ENST00000384165 ZNF98A6NK75 572 aa0.34□□□□□ -2.36
RNU6-42P-201ENST00000384165 SMIM23A6NLE4 172 aa0.34□□□□□ -2.36
RNU6-42P-201ENST00000384165 ZAR1LA6NP61 321 aa0.34□□□□□ -2.36
RNU6-42P-201ENST00000384165 USP17L23D6RBM5 183 aa0.34□□□□□ -2.36
RNU6-42P-201ENST00000384165 F6UB75 175 aa0.34□□□□□ -2.36
RNU6-42P-201ENST00000384165 SAP18O00422 153 aaKnown RBP0.34□□□□□ -2.36
RNU6-42P-201ENST00000384165 COQ9O75208 318 aa0.34□□□□□ -2.36
RNU6-42P-201ENST00000384165 NDUFS6O75380 124 aaKnown RBP0.34□□□□□ -2.36
RNU6-42P-201ENST00000384165 GYPBP06028 91 aa0.34□□□□□ -2.36
RNU6-42P-201ENST00000384165 CD5P06127 495 aa0.34□□□□□ -2.36
RNU6-42P-201ENST00000384165 HNRNPCP07910 306 aaKnown RBP eCLIP0.34□□□□□ -2.36
RNU6-42P-201ENST00000384165 CT47B1P0C2W7 299 aaPredicted RBP0.34□□□□□ -2.36
RNU6-42P-201ENST00000384165 SEC11BP0C7V7 166 aa0.34□□□□□ -2.36
RNU6-42P-201ENST00000384165 C1GALT1C1LP0DN25 315 aa0.34□□□□□ -2.36
RNU6-42P-201ENST00000384165 ESDP10768 282 aa0.34□□□□□ -2.36
RNU6-42P-201ENST00000384165 PSG2P11465 335 aa0.34□□□□□ -2.36
RNU6-42P-201ENST00000384165 SYT1P21579 422 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms