RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 ATG2AQ2TAZ0 1938 aa12.96□□□□□ -0.33
CTNS-202ENST00000381870 A0A1B0GUS0 222 aa12.96□□□□□ -0.33
CTNS-202ENST00000381870 H3BML4 177 aa12.96□□□□□ -0.33
CTNS-202ENST00000381870 HPRT1P00492 218 aa12.96□□□□□ -0.33
CTNS-202ENST00000381870 SMAD4Q13485 552 aaKnown RBP12.96□□□□□ -0.33
CTNS-202ENST00000381870 ACTL10Q5JWF8 245 aa12.96□□□□□ -0.33
CTNS-202ENST00000381870 FAM180AQ6UWF9 173 aa12.96□□□□□ -0.33
CTNS-202ENST00000381870 KNL1Q8NG31 2342 aa12.96□□□□□ -0.33
CTNS-202ENST00000381870 MOB3AQ96BX8 217 aa12.96□□□□□ -0.33
CTNS-202ENST00000381870 SMIM7Q9BQ49 75 aa12.96□□□□□ -0.33
CTNS-202ENST00000381870 MRPL13Q9BYD1 178 aaKnown RBP12.96□□□□□ -0.33
CTNS-202ENST00000381870 PRSS50Q9UI38 385 aa12.96□□□□□ -0.33
CTNS-202ENST00000381870 ZNF705FA8MVS1 300 aaPredicted RBP12.96□□□□□ -0.34
CTNS-202ENST00000381870 H3BP45 60 aa12.96□□□□□ -0.34
CTNS-202ENST00000381870 MPPED1O15442 326 aa12.96□□□□□ -0.34
CTNS-202ENST00000381870 CHST1O43916 411 aa12.96□□□□□ -0.34
CTNS-202ENST00000381870 HNRNPA1P09651 372 aaKnown RBP eCLIP12.96□□□□□ -0.34
CTNS-202ENST00000381870 ZNF705DP0CH99 300 aaPredicted RBP12.96□□□□□ -0.34
CTNS-202ENST00000381870 ZNF705BP0CI00 300 aaPredicted RBP12.96□□□□□ -0.34
CTNS-202ENST00000381870 CLRN1P58418 232 aa12.96□□□□□ -0.34
CTNS-202ENST00000381870 EXT1Q16394 746 aa12.96□□□□□ -0.34
CTNS-202ENST00000381870 BATFQ16520 125 aa12.96□□□□□ -0.34
CTNS-202ENST00000381870 ZNF695Q8IW36 515 aa12.96□□□□□ -0.34
CTNS-202ENST00000381870 UEVLDQ8IX04 471 aa12.96□□□□□ -0.34
CTNS-202ENST00000381870 RBKSQ9H477 322 aa12.96□□□□□ -0.34
CTNS-202ENST00000381870 SERINC1Q9NRX5 453 aa12.96□□□□□ -0.34
CTNS-202ENST00000381870 KLHL13Q9P2N7 655 aa12.96□□□□□ -0.34
CTNS-202ENST00000381870 VDAC3Q9Y277 283 aa12.96□□□□□ -0.34
CTNS-202ENST00000381870 H7BYZ3 331 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 SPRY1O43609 319 aaPredicted RBP12.95□□□□□ -0.34
CTNS-202ENST00000381870 OPN1LWP04000 364 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 BRS3P32247 399 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 FAM3BP58499 235 aaPredicted RBP12.95□□□□□ -0.34
CTNS-202ENST00000381870 TMEM31Q5JXX7 168 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 HLA-DQA1Q5Y7H0 255 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 SLC25A24Q6NUK1 477 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 PRSS58Q8IYP2 241 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 CCDC71LQ8N9Z2 235 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 FGF14Q92915 247 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 NAT6Q93015 286 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 SIGLEC12Q96PQ1 595 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 TMEM222Q9H0R3 208 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 LANCL2Q9NS86 450 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 B3GAT1Q9P2W7 334 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 NAT8Q9UHE5 227 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 UBE2J1Q9Y385 318 aaPredicted RBP12.95□□□□□ -0.34
CTNS-202ENST00000381870 CD33P20138 364 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 PLA2G5P39877 138 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 TDRG1Q3Y452 100 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 THEM4Q5T1C6 240 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 SDSLQ96GA7 329 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 OR5B12Q96R08 314 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 TBX15Q96SF7 602 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 PIGLQ9Y2B2 252 aa12.95□□□□□ -0.34
CTNS-202ENST00000381870 SPTBN5Q9NRC6 3674 aaKnown RBP12.95□□□□□ -0.34
CTNS-202ENST00000381870 KIAA2026Q5HYC2 2103 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 LRRC3CA6NJW4 275 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 NUPR1O60356 82 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 DTYMKP23919 212 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 MSX1P28360 303 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 OR10J1P30954 320 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 BAXQ07812 192 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 RUNX3Q13761 415 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 BSXQ3C1V8 233 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 SELENOHQ8IZQ5 122 aaKnown RBP12.94□□□□□ -0.34
CTNS-202ENST00000381870 TMEM256Q8N2U0 113 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 PLPPR1Q8TBJ4 325 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 ZNF385AQ96PM9 386 aaKnown RBP12.94□□□□□ -0.34
CTNS-202ENST00000381870 Q9N2K0 584 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 PLA2G3Q9NZ20 509 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 GALR2O43603 387 aaPredicted RBP12.94□□□□□ -0.34
CTNS-202ENST00000381870 EFNA3P52797 238 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 PAX9P55771 341 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 HERV-K104P61576 105 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 RPL23P62829 140 aaKnown RBP12.94□□□□□ -0.34
CTNS-202ENST00000381870 TFF2Q03403 129 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 TMEM267Q0VDI3 215 aaPredicted RBP12.94□□□□□ -0.34
CTNS-202ENST00000381870 PDCD1Q15116 288 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 SHHQ15465 462 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 TMEM241Q24JQ0 296 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 Q6ZPA2 131 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 OR2V1Q8NHB1 315 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.94□□□□□ -0.34
CTNS-202ENST00000381870 RPUSD4Q96CM3 377 aaKnown RBP12.94□□□□□ -0.34
CTNS-202ENST00000381870 P2RX4Q99571 388 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 ASCL3Q9NQ33 180 aa12.94□□□□□ -0.34
CTNS-202ENST00000381870 CHD3Q12873 2000 aaKnown RBP12.93□□□□□ -0.34
CTNS-202ENST00000381870 NPIPB13A6NJU9 1138 aa12.93□□□□□ -0.34
CTNS-202ENST00000381870 NPIPB4C9JG80 1138 aa12.93□□□□□ -0.34
CTNS-202ENST00000381870 F5H5K5 113 aa12.93□□□□□ -0.34
CTNS-202ENST00000381870 TCF21O43680 179 aa12.93□□□□□ -0.34
CTNS-202ENST00000381870 LCATP04180 440 aa12.93□□□□□ -0.34
CTNS-202ENST00000381870 MTCP1P56278 107 aa12.93□□□□□ -0.34
CTNS-202ENST00000381870 CLDN17P56750 224 aa12.93□□□□□ -0.34
CTNS-202ENST00000381870 C16orf47Q6ZP98 133 aaPredicted RBP12.93□□□□□ -0.34
CTNS-202ENST00000381870 TBC1D26Q86UD7 250 aa12.93□□□□□ -0.34
CTNS-202ENST00000381870 SPAG17Q6Q759 2223 aa12.93□□□□□ -0.34
CTNS-202ENST00000381870 RP1P56715 2156 aa12.93□□□□□ -0.34
CTNS-202ENST00000381870 DHRS3O75911 302 aa12.93□□□□□ -0.34
CTNS-202ENST00000381870 HRASP01112 189 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms