RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 SIGLEC9Q9Y336 463 aa12.43□□□□□ -0.42
RAB4B-202ENST00000378307 TBL2Q9Y4P3 447 aaKnown RBP12.43□□□□□ -0.42
RAB4B-202ENST00000378307 PCDHGB5Q9Y5G0 923 aa12.43□□□□□ -0.42
RAB4B-202ENST00000378307 TRGV10A0A0A0MS01 117 aa12.42□□□□□ -0.42
RAB4B-202ENST00000378307 TSPAN9O75954 239 aa12.42□□□□□ -0.42
RAB4B-202ENST00000378307 MAS1P04201 325 aa12.42□□□□□ -0.42
RAB4B-202ENST00000378307 CD1AP06126 327 aa12.42□□□□□ -0.42
RAB4B-202ENST00000378307 FSTP19883 344 aa12.42□□□□□ -0.42
RAB4B-202ENST00000378307 CDK2P24941 298 aa12.42□□□□□ -0.42
RAB4B-202ENST00000378307 GP2P55259 537 aaKnown RBP12.42□□□□□ -0.42
RAB4B-202ENST00000378307 TAS2R43P59537 309 aa12.42□□□□□ -0.42
RAB4B-202ENST00000378307 AANATQ16613 207 aa12.42□□□□□ -0.42
RAB4B-202ENST00000378307 RNLSQ5VYX0 342 aa12.42□□□□□ -0.42
RAB4B-202ENST00000378307 HEPN1Q6WQI6 88 aa12.42□□□□□ -0.42
RAB4B-202ENST00000378307 OR4P4Q8NGL7 312 aa12.42□□□□□ -0.42
RAB4B-202ENST00000378307 MALSU1Q96EH3 234 aa12.42□□□□□ -0.42
RAB4B-202ENST00000378307 CPNE2Q96FN4 548 aaPredicted RBP12.42□□□□□ -0.42
RAB4B-202ENST00000378307 CYYR1Q96J86 154 aa12.42□□□□□ -0.42
RAB4B-202ENST00000378307 CDCA4Q9BXL8 241 aa12.42□□□□□ -0.42
RAB4B-202ENST00000378307 ST3GAL6Q9Y274 331 aa12.42□□□□□ -0.42
RAB4B-202ENST00000378307 ERGIC3Q9Y282 383 aa12.42□□□□□ -0.42
RAB4B-202ENST00000378307 MGAM2Q2M2H8 2515 aa12.42□□□□□ -0.42
RAB4B-202ENST00000378307 TRAV39A0A0B4J263 110 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 VGLL3A8MV65 326 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 GEMIN2O14893 280 aaKnown RBP12.41□□□□□ -0.42
RAB4B-202ENST00000378307 SERPINA2P20848 420 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 MYF6P23409 242 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 SLC35A2P78381 396 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 IRF3Q14653 427 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 FAM189A2Q15884 450 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 PAN3Q58A45 887 aaKnown RBP12.41□□□□□ -0.42
RAB4B-202ENST00000378307 PRR31Q5SQ13 230 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 FAM27D1Q5T7N8 215 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 RSBN1Q5VWQ0 802 aaPredicted RBP12.41□□□□□ -0.42
RAB4B-202ENST00000378307 BRICD5Q6PL45 260 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 ABHD12Q8N2K0 398 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 OSR2Q8N2R0 312 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 SUMF2Q8NBJ7 301 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 OR13A1Q8NGR1 328 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 MUL1Q969V5 352 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 CITED1Q99966 193 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 CLEC7AQ9BXN2 247 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 METTL9Q9H1A3 318 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 ZNF286AQ9HBT8 521 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 TAS2R3Q9NYW6 316 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 IL36GQ9NZH8 169 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 KIF25Q9UIL4 384 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 FOXJ3Q9UPW0 622 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 HILPDAQ9Y5L2 63 aa12.41□□□□□ -0.42
RAB4B-202ENST00000378307 FUOMA2VDF0 154 aa12.4□□□□□ -0.42
RAB4B-202ENST00000378307 RBM11P57052 281 aaKnown RBP12.4□□□□□ -0.42
RAB4B-202ENST00000378307 SLC22A6Q4U2R8 563 aa12.4□□□□□ -0.42
RAB4B-202ENST00000378307 FBLN7Q53RD9 439 aa12.4□□□□□ -0.42
RAB4B-202ENST00000378307 NHLRC3Q5JS37 347 aa12.4□□□□□ -0.42
RAB4B-202ENST00000378307 HIST2H2BDQ6DRA6 164 aa12.4□□□□□ -0.42
RAB4B-202ENST00000378307 UNQ9370/PRO34162Q6UXP9 181 aa12.4□□□□□ -0.42
RAB4B-202ENST00000378307 OR4D6Q8NGJ1 314 aa12.4□□□□□ -0.42
RAB4B-202ENST00000378307 ANKRD60Q9BZ19 345 aa12.4□□□□□ -0.42
RAB4B-202ENST00000378307 GAL3ST2Q9H3Q3 398 aa12.4□□□□□ -0.42
RAB4B-202ENST00000378307 DUSP21Q9H596 190 aa12.4□□□□□ -0.42
RAB4B-202ENST00000378307 ZNF696Q9H7X3 374 aa12.4□□□□□ -0.42
RAB4B-202ENST00000378307 VWFP04275 2813 aa12.39□□□□□ -0.43
RAB4B-202ENST00000378307 WNK1Q9H4A3 2382 aa12.39□□□□□ -0.43
RAB4B-202ENST00000378307 MEIKINA0A087WXM9 373 aa12.39□□□□□ -0.43
RAB4B-202ENST00000378307 OR7C1O76099 320 aaPredicted RBP12.39□□□□□ -0.43
RAB4B-202ENST00000378307 IGLV1-47P01700 117 aa12.39□□□□□ -0.43
RAB4B-202ENST00000378307 BDH1Q02338 343 aa12.39□□□□□ -0.43
RAB4B-202ENST00000378307 SPHARQ15513 63 aa12.39□□□□□ -0.43
RAB4B-202ENST00000378307 GLIPR1L1Q6UWM5 242 aa12.39□□□□□ -0.43
RAB4B-202ENST00000378307 IZUMO2Q6UXV1 221 aa12.39□□□□□ -0.43
RAB4B-202ENST00000378307 TMEM219Q86XT9 240 aa12.39□□□□□ -0.43
RAB4B-202ENST00000378307 JAGN1Q8N5M9 183 aa12.39□□□□□ -0.43
RAB4B-202ENST00000378307 MYDGFQ969H8 173 aa12.39□□□□□ -0.43
RAB4B-202ENST00000378307 FOXRED1Q96CU9 486 aaPredicted RBP12.39□□□□□ -0.43
RAB4B-202ENST00000378307 DPCDQ9BVM2 203 aaPredicted RBP12.39□□□□□ -0.43
RAB4B-202ENST00000378307 MND1Q9BWT6 205 aa12.39□□□□□ -0.43
RAB4B-202ENST00000378307 IFT22Q9H7X7 185 aa12.39□□□□□ -0.43
RAB4B-202ENST00000378307 SCN3BQ9NY72 215 aa12.39□□□□□ -0.43
RAB4B-202ENST00000378307 CKLFQ9UBR5 152 aa12.39□□□□□ -0.43
RAB4B-202ENST00000378307 KBTBD11-OT1A0A1B0GTJ5 212 aa12.38□□□□□ -0.43
RAB4B-202ENST00000378307 A6NDX4 124 aa12.38□□□□□ -0.43
RAB4B-202ENST00000378307 ZNF729A6NN14 1252 aaPredicted RBP12.38□□□□□ -0.43
RAB4B-202ENST00000378307 H0YHG0 523 aa12.38□□□□□ -0.43
RAB4B-202ENST00000378307 IGHV3-7P01780 117 aa12.38□□□□□ -0.43
RAB4B-202ENST00000378307 CSTBP04080 98 aaKnown RBP12.38□□□□□ -0.43
RAB4B-202ENST00000378307 VHLP40337 213 aa12.38□□□□□ -0.43
RAB4B-202ENST00000378307 GLP1RP43220 463 aa12.38□□□□□ -0.43
RAB4B-202ENST00000378307 MED22Q15528 200 aa12.38□□□□□ -0.43
RAB4B-202ENST00000378307 ACSM3Q53FZ2 586 aa12.38□□□□□ -0.43
RAB4B-202ENST00000378307 MINOS1Q5TGZ0 78 aa12.38□□□□□ -0.43
RAB4B-202ENST00000378307 RFESDQ8TAC1 157 aa12.38□□□□□ -0.43
RAB4B-202ENST00000378307 NDNFQ8TB73 568 aa12.38□□□□□ -0.43
RAB4B-202ENST00000378307 MRGPRDQ8TDS7 321 aa12.38□□□□□ -0.43
RAB4B-202ENST00000378307 KIRREL1Q96J84 757 aa12.38□□□□□ -0.43
RAB4B-202ENST00000378307 S100A13Q99584 98 aa12.38□□□□□ -0.43
RAB4B-202ENST00000378307 TMED9Q9BVK6 235 aa12.38□□□□□ -0.43
RAB4B-202ENST00000378307 BARHL1Q9BZE3 327 aa12.38□□□□□ -0.43
RAB4B-202ENST00000378307 OR6C3Q9NZP0 311 aa12.38□□□□□ -0.43
RAB4B-202ENST00000378307 FBLN5Q9UBX5 448 aa12.38□□□□□ -0.43
RAB4B-202ENST00000378307 TCF19Q9Y242 345 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms