RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 SSTP61278 116 aa18.24■□□□□ 0.51
UPF3A-202ENST00000375299 SLC25A45Q8N413 288 aa18.24■□□□□ 0.51
UPF3A-202ENST00000375299 IL22RA1Q8N6P7 574 aa18.24■□□□□ 0.51
UPF3A-202ENST00000375299 TMEM217Q8N7C4 229 aa18.24■□□□□ 0.51
UPF3A-202ENST00000375299 S100PBPQ96BU1 408 aa18.24■□□□□ 0.51
UPF3A-202ENST00000375299 CHCHD2Q9Y6H1 151 aaPredicted RBP18.24■□□□□ 0.51
UPF3A-202ENST00000375299 LOC102723971A0A1B0GUV8 181 aa18.23■□□□□ 0.51
UPF3A-202ENST00000375299 CLEC18AA5D8T8 446 aa18.23■□□□□ 0.51
UPF3A-202ENST00000375299 TRGC1P0CF51 173 aa18.23■□□□□ 0.51
UPF3A-202ENST00000375299 MMP9P14780 707 aa18.23■□□□□ 0.51
UPF3A-202ENST00000375299 RBM11P57052 281 aaKnown RBP18.23■□□□□ 0.51
UPF3A-202ENST00000375299 OR2T2Q6IF00 324 aa18.23■□□□□ 0.51
UPF3A-202ENST00000375299 CLEC18CQ8NCF0 446 aa18.23■□□□□ 0.51
UPF3A-202ENST00000375299 OR10G4Q8NGN3 311 aa18.23■□□□□ 0.51
UPF3A-202ENST00000375299 RHOVQ96L33 236 aa18.23■□□□□ 0.51
UPF3A-202ENST00000375299 DEFB126Q9BYW3 111 aa18.23■□□□□ 0.51
UPF3A-202ENST00000375299 SLC7A10Q9NS82 523 aa18.23■□□□□ 0.51
UPF3A-202ENST00000375299 OR5H1A6NKK0 313 aa18.23■□□□□ 0.51
UPF3A-202ENST00000375299 TMEM50AO95807 157 aa18.23■□□□□ 0.51
UPF3A-202ENST00000375299 SPIN3Q5JUX0 258 aa18.23■□□□□ 0.51
UPF3A-202ENST00000375299 ZNF774Q6NX45 483 aa18.23■□□□□ 0.51
UPF3A-202ENST00000375299 P4HA3Q7Z4N8 544 aa18.23■□□□□ 0.51
UPF3A-202ENST00000375299 SIGLEC12Q96PQ1 595 aa18.23■□□□□ 0.51
UPF3A-202ENST00000375299 CALHM2Q9HA72 323 aa18.23■□□□□ 0.51
UPF3A-202ENST00000375299 UFSP2Q9NUQ7 469 aa18.23■□□□□ 0.51
UPF3A-202ENST00000375299 DKKL1Q9UK85 242 aa18.23■□□□□ 0.51
UPF3A-202ENST00000375299 A0A087WZY1 265 aa18.22■□□□□ 0.51
UPF3A-202ENST00000375299 DUXBA0A1W2PPF3 345 aa18.22■□□□□ 0.51
UPF3A-202ENST00000375299 ATXN7O15265 892 aaPredicted RBP18.22■□□□□ 0.51
UPF3A-202ENST00000375299 FUT3P21217 361 aa18.22■□□□□ 0.51
UPF3A-202ENST00000375299 FUT6P51993 359 aa18.22■□□□□ 0.51
UPF3A-202ENST00000375299 CD81P60033 236 aa18.22■□□□□ 0.51
UPF3A-202ENST00000375299 ID3Q02535 119 aa18.22■□□□□ 0.51
UPF3A-202ENST00000375299 C1orf87Q8N0U7 546 aa18.22■□□□□ 0.51
UPF3A-202ENST00000375299 OR1F12Q8NHA8 337 aa18.22■□□□□ 0.51
UPF3A-202ENST00000375299 FAM210BQ96KR6 192 aa18.22■□□□□ 0.51
UPF3A-202ENST00000375299 ATP5SQ99766 215 aa18.22■□□□□ 0.51
UPF3A-202ENST00000375299 FAM86C1Q9NVL1 165 aa18.22■□□□□ 0.51
UPF3A-202ENST00000375299 TP53I11O14683 189 aa18.22■□□□□ 0.51
UPF3A-202ENST00000375299 TAS2R30P59541 319 aa18.22■□□□□ 0.51
UPF3A-202ENST00000375299 ZNF154Q13106 437 aa18.22■□□□□ 0.51
UPF3A-202ENST00000375299 NMSQ5H8A3 153 aa18.22■□□□□ 0.51
UPF3A-202ENST00000375299 ZIC4Q8N9L1 334 aa18.22■□□□□ 0.51
UPF3A-202ENST00000375299 ABHD5Q8WTS1 349 aa18.22■□□□□ 0.51
UPF3A-202ENST00000375299 FRZBQ92765 325 aa18.22■□□□□ 0.51
UPF3A-202ENST00000375299 KIAA1549Q9HCM3 1950 aa18.21■□□□□ 0.51
UPF3A-202ENST00000375299 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.21■□□□□ 0.51
UPF3A-202ENST00000375299 CD200P41217 278 aa18.21■□□□□ 0.51
UPF3A-202ENST00000375299 GAMTQ14353 236 aa18.21■□□□□ 0.51
UPF3A-202ENST00000375299 WDR5BQ86VZ2 330 aa18.21■□□□□ 0.51
UPF3A-202ENST00000375299 PLPPR1Q8TBJ4 325 aa18.21■□□□□ 0.51
UPF3A-202ENST00000375299 M1APQ8TC57 530 aa18.21■□□□□ 0.51
UPF3A-202ENST00000375299 SCRG1O75711 98 aa18.2■□□□□ 0.5
UPF3A-202ENST00000375299 OR7C1O76099 320 aaPredicted RBP18.2■□□□□ 0.5
UPF3A-202ENST00000375299 IL24Q13007 206 aa18.2■□□□□ 0.5
UPF3A-202ENST00000375299 GPR137CQ8N3F9 429 aa18.2■□□□□ 0.5
UPF3A-202ENST00000375299 OR6C1Q96RD1 312 aa18.2■□□□□ 0.5
UPF3A-202ENST00000375299 P4HTMQ9NXG6 502 aa18.2■□□□□ 0.5
UPF3A-202ENST00000375299 TGOLN2O43493 480 aa18.2■□□□□ 0.5
UPF3A-202ENST00000375299 FABP4P15090 132 aa18.2■□□□□ 0.5
UPF3A-202ENST00000375299 VDAC1P21796 283 aa18.2■□□□□ 0.5
UPF3A-202ENST00000375299 RND2P52198 227 aa18.2■□□□□ 0.5
UPF3A-202ENST00000375299 RAET1LQ5VY80 246 aa18.2■□□□□ 0.5
UPF3A-202ENST00000375299 FAM90A2PQ658T7 463 aa18.2■□□□□ 0.5
UPF3A-202ENST00000375299 ZNF818PQ6ZRF7 136 aa18.2■□□□□ 0.5
UPF3A-202ENST00000375299 CEP192Q8TEP8 1941 aa18.2■□□□□ 0.5
UPF3A-202ENST00000375299 CCDC163A0A0D9SF12 145 aa18.19■□□□□ 0.5
UPF3A-202ENST00000375299 NXPH3O95157 252 aa18.19■□□□□ 0.5
UPF3A-202ENST00000375299 CST2P09228 141 aa18.19■□□□□ 0.5
UPF3A-202ENST00000375299 DAZAP2Q15038 168 aaPredicted RBP18.19■□□□□ 0.5
UPF3A-202ENST00000375299 PLCXD3Q63HM9 321 aa18.19■□□□□ 0.5
UPF3A-202ENST00000375299 GAPTQ8N292 157 aa18.19■□□□□ 0.5
UPF3A-202ENST00000375299 PHF7Q9BWX1 381 aaPredicted RBP18.19■□□□□ 0.5
UPF3A-202ENST00000375299 C19orf25Q9UFG5 118 aaPredicted RBP18.19■□□□□ 0.5
UPF3A-202ENST00000375299 TRAV1-1A0A0B4J248 108 aa18.19■□□□□ 0.5
UPF3A-202ENST00000375299 hCG_38984A0A1B0GV85 526 aa18.19■□□□□ 0.5
UPF3A-202ENST00000375299 SLC33A1O00400 549 aaPredicted RBP18.19■□□□□ 0.5
UPF3A-202ENST00000375299 CHST1O43916 411 aa18.19■□□□□ 0.5
UPF3A-202ENST00000375299 UCP1P25874 307 aa18.19■□□□□ 0.5
UPF3A-202ENST00000375299 PKIAP61925 76 aa18.19■□□□□ 0.5
UPF3A-202ENST00000375299 PNRC1Q12796 327 aaPredicted RBP18.19■□□□□ 0.5
UPF3A-202ENST00000375299 OR8G1Q15617 311 aa18.19■□□□□ 0.5
UPF3A-202ENST00000375299 REC114Q7Z4M0 266 aa18.19■□□□□ 0.5
UPF3A-202ENST00000375299 GTF3AQ92664 365 aaKnown RBP18.19■□□□□ 0.5
UPF3A-202ENST00000375299 NAT6Q93015 286 aa18.19■□□□□ 0.5
UPF3A-202ENST00000375299 TMEM242Q9NWH2 141 aa18.19■□□□□ 0.5
UPF3A-202ENST00000375299 Q6ZS49 121 aa18.18■□□□□ 0.5
UPF3A-202ENST00000375299 GNG13Q9P2W3 67 aa18.18■□□□□ 0.5
UPF3A-202ENST00000375299 ZNF391Q9UJN7 358 aa18.18■□□□□ 0.5
UPF3A-202ENST00000375299 OR6C6A6NF89 314 aa18.18■□□□□ 0.5
UPF3A-202ENST00000375299 CLDN34H7C241 214 aa18.18■□□□□ 0.5
UPF3A-202ENST00000375299 CYB5R3P00387 301 aaPredicted RBP18.18■□□□□ 0.5
UPF3A-202ENST00000375299 ZNF32P17041 273 aa18.18■□□□□ 0.5
UPF3A-202ENST00000375299 IGFBP4P22692 258 aa18.18■□□□□ 0.5
UPF3A-202ENST00000375299 PAX9P55771 341 aa18.18■□□□□ 0.5
UPF3A-202ENST00000375299 RAB11AP62491 216 aa18.18■□□□□ 0.5
UPF3A-202ENST00000375299 KRTAP27-1Q3LI81 207 aa18.18■□□□□ 0.5
UPF3A-202ENST00000375299 DBX2Q6ZNG2 339 aa18.18■□□□□ 0.5
UPF3A-202ENST00000375299 SSX9Q7RTT3 188 aa18.18■□□□□ 0.5
UPF3A-202ENST00000375299 PIGCQ92535 297 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms