RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 OC90Q02509 493 aaPredicted RBP4.09□□□□□ -1.75
USP48-202ENST00000374730 BAMBIQ13145 260 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 SURF2Q15527 256 aaPredicted RBP4.09□□□□□ -1.75
USP48-202ENST00000374730 UBE2V2Q15819 145 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 MICBQ29980 383 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 HYAL4Q2M3T9 481 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 SLC22A6Q4U2R8 563 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 ACER2Q5QJU3 275 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 ZNF660Q6AZW8 331 aaPredicted RBP4.09□□□□□ -1.75
USP48-202ENST00000374730 OR52W1Q6IF63 320 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 C17orf107Q6ZR85 190 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 ACOT7LQ6ZUV0 252 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 RNF144BQ7Z419 303 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 HSD17B13Q7Z5P4 300 aaPredicted RBP4.09□□□□□ -1.75
USP48-202ENST00000374730 TMEM17Q86X19 198 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 ZNF100Q8IYN0 542 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 TMEM185AQ8NFB2 350 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 OR5M9Q8NGP3 310 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 OR5H2Q8NGV7 314 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 OR1F12Q8NHA8 337 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 OR2V1Q8NHB1 315 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 TERB2Q8NHR7 220 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 LRRC20Q8TCA0 184 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 TMEM45BQ96B21 275 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 FBXO17Q96EF6 278 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 ARHGAP5-AS1Q96IT6 56 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 SPACA5Q96QH8 159 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 DHRS9Q9BPW9 319 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 RBM24Q9BX46 236 aaKnown RBP4.09□□□□□ -1.75
USP48-202ENST00000374730 REG4Q9BYZ8 158 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 SPRY4Q9C004 299 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 STRADBQ9C0K7 418 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 MFFQ9GZY8 342 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 RGCCQ9H4X1 137 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 FN3KRPQ9HA64 309 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 PCDHB16Q9NRJ7 776 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 PLEK2Q9NYT0 353 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 COMMD9Q9P000 198 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 DUX4Q9UBX2 424 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 ATPIF1Q9UII2 106 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 TNFSF18Q9UNG2 199 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 GPR132Q9UNW8 380 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 BAHCC1Q9P281 2608 aa4.09□□□□□ -1.75
USP48-202ENST00000374730 IGKV3D-15A0A087WSY6 115 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 A0A1W2PP11 408 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 KANTRA0A1W2PQU2 76 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 RNF222A6NCQ9 220 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 MFSD2BA6NFX1 497 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 STMND1H3BQB6 276 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 SGCEO43556 437 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 RAD51DO75771 328 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 SFT2D2O95562 160 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 PMP2P02689 132 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 HPNP05981 417 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 CRHP06850 196 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 HOXB5P09067 269 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 LIPCP11150 499 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 SELLP14151 372 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 ZNF32P17041 273 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 PRKACBP22694 351 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 PTAFRP25105 342 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 DLSTP36957 453 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 CYB561P49447 251 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 CARD18P57730 90 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 ARPC4P59998 168 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 PCBD1P61457 104 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 CYCSP99999 105 aaKnown RBP4.08□□□□□ -1.76
USP48-202ENST00000374730 ARFRP1Q13795 201 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 SNAI3Q3KNW1 292 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 TMEM128Q5BJH2 165 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 PDSS1Q5T2R2 415 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 TMEM42Q69YG0 159 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 SIGIRRQ6IA17 410 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 PLXDC2Q6UX71 529 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 ASCL4Q6XD76 172 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 Q6ZTC4 211 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 AAED1Q7RTV5 226 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 TIPARPQ7Z3E1 657 aaKnown RBP4.08□□□□□ -1.76
USP48-202ENST00000374730 YRDCQ86U90 279 aaKnown RBP4.08□□□□□ -1.76
USP48-202ENST00000374730 ZNF546Q86UE3 836 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 RTN4RL2Q86UN3 420 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 PDZD9Q8IXQ8 264 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 EIF4E3Q8N5X7 224 aaKnown RBP4.08□□□□□ -1.76
USP48-202ENST00000374730 TMEM217Q8N7C4 229 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 ZBTB44Q8NCP5 570 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 ADAD2Q8NCV1 583 aaKnown RBP4.08□□□□□ -1.76
USP48-202ENST00000374730 OR51T1Q8NGJ9 327 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 OR13G1Q8NGZ3 307 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 OR14L1PQ8NHC6 308 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 MARCH1Q8TCQ1 289 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 PPP1R1CQ8WVI7 109 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 C17orf50Q8WW18 174 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 PSMF1Q92530 271 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 EMG1Q92979 244 aaKnown RBP4.08□□□□□ -1.76
USP48-202ENST00000374730 RBPMSQ93062 196 aaKnown RBP4.08□□□□□ -1.76
USP48-202ENST00000374730 CPNE4Q96A23 557 aaPredicted RBP4.08□□□□□ -1.76
USP48-202ENST00000374730 TMEM230Q96A57 120 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 SGK3Q96BR1 496 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 PHYHIPLQ96FC7 376 aa4.08□□□□□ -1.76
USP48-202ENST00000374730 JSRP1Q96MG2 331 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms