RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 PCGF1Q9BSM1 259 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 HEYLQ9NQ87 328 aaPredicted RBP5.85□□□□□ -1.47
CHD6-203ENST00000373233 NAV3Q8IVL0 2385 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 A0A1B0GWJ7 208 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 P2RY10O00398 339 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 MTCP1P56278 107 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 NMNAT3Q96T66 252 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 TMEM238LA0A1B0GVL6 79 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 A6NJY4 79 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 PIAS2O75928 621 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 ANKRD34CP0C6C1 535 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 LTBRP36941 435 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 DCAF7P61962 342 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 SCRG1O75711 98 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 COX5BP10606 129 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 PTGER4P35408 488 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 MMP16P51512 607 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 NXPH1P58417 271 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 PPP1CAP62136 330 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 GABREP78334 506 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 KLF9Q13886 244 aaPredicted RBP5.85□□□□□ -1.47
CHD6-203ENST00000373233 KIAA0040Q15053 153 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 PMCHL1Q16048 86 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 DCAF12L2Q5VW00 463 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 NPSR1Q6W5P4 371 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 OR4S2Q8NH73 311 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 TMEM255BQ8WV15 326 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 HSD17B8Q92506 261 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 SPSB2Q99619 263 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 SLX1AQ9BQ83 275 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 MYO9AB2RTY4 2548 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 LOC107984156A0A0G2JMH3 177 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 ZNF253O75346 499 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 HPXP02790 462 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 FTH1P19P0C7X4 201 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 SRSF9Q13242 221 aaKnown RBP eCLIP5.85□□□□□ -1.47
CHD6-203ENST00000373233 TMEM225Q6GV28 225 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 VASH2Q86V25 355 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 ARL17AQ8IVW1 177 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 FBLIM1Q8WUP2 373 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 TNFSF18Q9UNG2 199 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 MYO18BQ8IUG5 2567 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 KDM4EB2RXH2 506 aaPredicted RBP5.85□□□□□ -1.47
CHD6-203ENST00000373233 ZNF749O43361 778 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 GLI4P10075 376 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 MMP9P14780 707 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 GPR3P46089 330 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 CDK5R1Q15078 307 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 FAM69BQ5VUD6 431 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 C12orf73Q69YU5 71 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 OR10G8Q8NGN5 311 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 CLEC5AQ9NY25 188 aa5.85□□□□□ -1.47
CHD6-203ENST00000373233 F11RQ9Y624 299 aaKnown RBP5.85□□□□□ -1.47
CHD6-203ENST00000373233 HCRTR1O43613 425 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 EML2O95834 649 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 MC5RP33032 325 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 DCDP81605 110 aaKnown RBP5.84□□□□□ -1.47
CHD6-203ENST00000373233 IRF3Q14653 427 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 PRAMEF5Q5TYX0 476 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 PRAMEF6Q5VXH4 476 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 DYSFO75923 2080 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 FAM87AP0C7U9 286 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 ZIC1Q15915 447 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 ATOH7Q8N100 152 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 OR10S1Q8NGN2 331 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 GNG12Q9UBI6 72 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 MEX3AA1L020 520 aaKnown RBP5.84□□□□□ -1.47
CHD6-203ENST00000373233 CORTO00230 105 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 ADH4P08319 380 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 IL24Q13007 206 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 RAB32Q13637 225 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 SLC16A11Q8NCK7 471 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 BARX1Q9HBU1 254 aaPredicted RBP5.84□□□□□ -1.47
CHD6-203ENST00000373233 PIGLQ9Y2B2 252 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 SMIM13P0DJ93 91 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 MYF5P13349 255 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 NMUP48645 174 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 SPANXN5Q5MJ07 72 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 OR13C6PQ8NH95 151 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 MENTQ9BUN1 341 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 VCX2Q9H322 139 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 ISG20L2Q9H9L3 353 aaKnown RBP5.84□□□□□ -1.47
CHD6-203ENST00000373233 HINT3Q9NQE9 182 aaKnown RBP5.84□□□□□ -1.47
CHD6-203ENST00000373233 FGF21Q9NSA1 209 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 KIAA1456Q9P272 454 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 RCC1P18754 421 aaPredicted RBP5.84□□□□□ -1.47
CHD6-203ENST00000373233 TGIF1Q15583 401 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 ZFAND6Q6FIF0 208 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 H2BFWTQ7Z2G1 175 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 SLC22A18ASQ8N1D0 253 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 AGBL5Q8NDL9 886 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 TNCP24821 2201 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 FREM1Q5H8C1 2179 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 OR7C1O76099 320 aaPredicted RBP5.84□□□□□ -1.47
CHD6-203ENST00000373233 DUS4LO95620 317 aaKnown RBP5.84□□□□□ -1.47
CHD6-203ENST00000373233 RUNX2Q13950 521 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 IZUMO4Q1ZYL8 232 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 Q5BKY6 102 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 ZNF506Q5JVG8 444 aa5.84□□□□□ -1.47
CHD6-203ENST00000373233 ARRDC1Q8N5I2 433 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms