RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 FBXL17Q9UF56 701 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 TINAGQ9UJW2 476 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 RELNP78509 3460 aa10.07□□□□□ -0.8
PDE6C-201ENST00000371447 IGKV1D-13A0A0B4J2D9 117 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 SHOXO15266 292 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 IGKV1-13P0DP09 117 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 MPZP25189 248 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 TMEM33P57088 247 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 NHLH2Q02577 135 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 OR2B11Q5JQS5 317 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 VWA1Q6PCB0 445 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 TPRX1Q8N7U7 411 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 MDS2Q8NDY4 140 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 NTNG2Q96CW9 530 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 PRDM14Q9GZV8 571 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 NAA60Q9H7X0 242 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 KCNS2Q9ULS6 477 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 IGKV3D-15A0A087WSY6 115 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 CRYM-AS1A6NIL9 109 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 H0YL77 283 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 IGHV3-13P01766 116 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 IGHV3-7P01780 117 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 MBPP02686 304 aaPredicted RBP10.06□□□□□ -0.8
PDE6C-201ENST00000371447 CTSDP07339 412 aaPredicted RBP10.06□□□□□ -0.8
PDE6C-201ENST00000371447 MAJINQ3KP22 176 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 CEACAM21Q3KPI0 293 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 Q3ZCU0 254 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 SLC35G3Q8N808 338 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 TMEM178AQ8NBL3 297 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 KIRREL1Q96J84 757 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 TSNAXQ99598 290 aaKnown RBP10.06□□□□□ -0.8
PDE6C-201ENST00000371447 SLC25A32Q9H2D1 315 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 MSL2Q9HCI7 577 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 SH3BGRL2Q9UJC5 107 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 RNF150Q9ULK6 438 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 ZNF175Q9Y473 711 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 AUP1Q9Y679 476 aa10.06□□□□□ -0.8
PDE6C-201ENST00000371447 PRH1P02810 166 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 ZP3P21754 424 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 CEBPGP53567 150 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 FOXF2Q12947 444 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 RNPS1Q15287 305 aaKnown RBP10.05□□□□□ -0.8
PDE6C-201ENST00000371447 TFAP2EQ6VUC0 442 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 ZNF695Q8IW36 515 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 ZFP62Q8NB50 900 aaPredicted RBP10.05□□□□□ -0.8
PDE6C-201ENST00000371447 OR1J1Q8NGS3 322 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 PPP1R3CQ9UQK1 317 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 A0A1B0GW55 424 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 NKX2-6A6NCS4 301 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 TERTO14746 1132 aaKnown RBP10.05□□□□□ -0.8
PDE6C-201ENST00000371447 ACTL6AO96019 429 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 DUX4L2P0CJ85 424 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 DUX4L3P0CJ86 424 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 DUX4L4P0CJ87 422 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 DUX4L5P0CJ88 424 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 DUX4L6P0CJ89 424 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 DUX4L7P0CJ90 424 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 ARR3P36575 388 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 AKR1C3P42330 323 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 TNFSF10P50591 281 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 ZNF124Q15973 351 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 SUMF2Q8NBJ7 301 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 GLYATL2Q8WU03 294 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 TMEM45BQ96B21 275 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 CNTNAP3BQ96NU0 1288 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 CNTNAP3Q9BZ76 1288 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 DUX4Q9UBX2 424 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 NUP50Q9UKX7 468 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 ANAPC10Q9UM13 185 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 RCL1Q9Y2P8 373 aaKnown RBP10.05□□□□□ -0.8
PDE6C-201ENST00000371447 PQLC2LA1A4F0 135 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 F8W036 122 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 CST7O76096 145 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 SLC34A2O95436 690 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 FGF2P09038 288 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 HLA-GP17693 338 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 BLOC1S1P78537 153 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 ZNF345Q14585 488 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 ZNF169Q14929 603 aaPredicted RBP10.05□□□□□ -0.8
PDE6C-201ENST00000371447 ZNF818PQ6ZRF7 136 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 TBC1D26Q86UD7 250 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 OR1K1Q8NGR3 316 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 PRRX2Q99811 253 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 CYTL1Q9NRR1 136 aa10.05□□□□□ -0.8
PDE6C-201ENST00000371447 ERRFI1Q9UJM3 462 aaPredicted RBP10.05□□□□□ -0.8
PDE6C-201ENST00000371447 TLN1Q9Y490 2541 aaKnown RBP10.05□□□□□ -0.8
PDE6C-201ENST00000371447 IGF2RP11717 2491 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 SPTAN1Q13813 2472 aaKnown RBP10.04□□□□□ -0.8
PDE6C-201ENST00000371447 WNT9BO14905 357 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 DEGS1O15121 323 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 SSSCA1O60232 199 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 NXPH2O95156 264 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 HKR1P10072 659 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 DAZAP2Q15038 168 aaPredicted RBP10.04□□□□□ -0.8
PDE6C-201ENST00000371447 SLC25A40Q8TBP6 338 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 DUSP13Q9UII6 198 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 FAM24AA6NFZ4 105 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 FAM74A7A6NL05 159 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 A8MXK9 166 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 PROB1E7EW31 1015 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms