RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 C10orf142B7Z368 130 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 SPRY1O43609 319 aaPredicted RBP10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 OPN1MWP04001 364 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 HNRNPA1P09651 372 aaKnown RBP eCLIP10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 OPN1MW2P0DN77 364 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 OPN1MW3P0DN78 364 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 AADACP22760 399 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 RUNX3Q13761 415 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 PDCD1Q15116 288 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 ZNF776Q68DI1 518 aaPredicted RBP10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 ZNF573Q86YE8 665 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 TMEM56Q96MV1 263 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 WWTR1Q9GZV5 400 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 TMEM222Q9H0R3 208 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 RBKSQ9H477 322 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 MOB1AQ9H8S9 216 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 TMEM56-RWDD3S4R434 201 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 M0R143 59 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 COMPP49747 757 aaPredicted RBP10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 HNRNPKP61978 463 aaKnown RBP eCLIP10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 PHYHD1Q5SRE7 291 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 COL13A1Q5TAT6 717 aaPredicted RBP10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 SLC25A47Q6Q0C1 308 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 DOK3Q7L591 496 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 PLEKHF2Q9H8W4 249 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 GAB2Q9UQC2 676 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 A0A1W2PNV4 684 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 FAM230AA0A1W2PPH8 454 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 TP53I11O14683 189 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 TRAF3IP2O43734 574 aaPredicted RBP10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 OPN1LWP04000 364 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 DAP3P51398 398 aaKnown RBP10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 TAS2R30P59541 319 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 SNAI3Q3KNW1 292 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 NECAP2Q9NVZ3 263 aa10.05□□□□□ -0.8
SMARCA1-201ENST00000371121 C3orf85A0A1B0GTC6 90 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 DFFBO76075 338 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 IL6RP08887 468 aaPredicted RBP10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 EDN3P14138 238 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 GABREP78334 506 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 PNRC1Q12796 327 aaPredicted RBP10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 RNPS1Q15287 305 aaKnown RBP10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 ADAM20O43506 726 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 TNFSF12O43508 249 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 HNRNPA2B1P22626 353 aaKnown RBP10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 OR1D4P47884 311 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 NPBWR2P48146 333 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 RPL15P61313 204 aaKnown RBP10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 RPL23P62829 140 aaKnown RBP10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 ZNF92Q03936 586 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 TLE3Q04726 772 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 ARSJQ5FYB0 599 aaPredicted RBP10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 ZNF66Q6ZN08 573 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 CARFQ8N187 725 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 ZNF385AQ96PM9 386 aaKnown RBP10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 MYOTQ9UBF9 498 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 FUT9Q9Y231 359 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 RALGAPA1Q6GYQ0 2036 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 ZNF850A8MQ14 1090 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 MPPED1O15442 326 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 CDS2O95674 445 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 ZNF818PQ6ZRF7 136 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 POC1BQ8TC44 478 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 GATAD1Q8WUU5 269 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 TBL1XR1Q9BZK7 514 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 LAMP3Q9UQV4 416 aa10.04□□□□□ -0.8
SMARCA1-201ENST00000371121 IGKV1D-13A0A0B4J2D9 117 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 LRRC3CA6NJW4 275 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 H3BML4 177 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 CHST1O43916 411 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 HLA-HP01893 362 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 IGKV1-13P0DP09 117 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 CTSSP25774 331 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 IL12BP29460 328 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 TRIM61Q5EBN2 209 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 FBXW9Q5XUX1 488 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 DNM1P34Q6PK57 102 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 OR13H1Q8NG92 308 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 MBD3L1Q8WWY6 194 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 VDAC3Q9Y277 283 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 KIAA1549Q9HCM3 1950 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 SEC16AO15027 2179 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 IGHV5-51A0A0C4DH38 117 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 OR3A1P47881 315 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 UCP3P55916 312 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 RBX1P62877 108 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 HNF4GQ14541 408 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 IZUMO4Q1ZYL8 232 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 Q6ZRM9 215 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 H1FOOQ8IZA3 346 aaPredicted RBP10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 ATP5SQ99766 215 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 AGMATQ9BSE5 352 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 GPR173Q9NS66 373 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 WNT16Q9UBV4 365 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 METTL15P1P0C7V9 234 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 NPPCP23582 126 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 NKX2-1P43699 371 aaPredicted RBP10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 PLCXD2Q0VAA5 305 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 SHHQ15465 462 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms