RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 C3orf85A0A1B0GTC6 90 aa10.64□□□□□ -0.71
PHGDH-201ENST00000369407 IGKV1D-12P01611 117 aa10.64□□□□□ -0.71
PHGDH-201ENST00000369407 MYPOPQ86VE0 399 aaPredicted RBP10.64□□□□□ -0.71
PHGDH-201ENST00000369407 ZNF695Q8IW36 515 aa10.64□□□□□ -0.71
PHGDH-201ENST00000369407 ELOVL1Q9BW60 279 aa10.64□□□□□ -0.71
PHGDH-201ENST00000369407 SNHG12Q9BXW3 62 aa10.64□□□□□ -0.71
PHGDH-201ENST00000369407 NPIPB13A6NJU9 1138 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 NPIPB4C9JG80 1138 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 BCAT2O15382 392 aaPredicted RBP10.63□□□□□ -0.71
PHGDH-201ENST00000369407 EN2P19622 333 aaPredicted RBP10.63□□□□□ -0.71
PHGDH-201ENST00000369407 ZNF133P52736 654 aaPredicted RBP10.63□□□□□ -0.71
PHGDH-201ENST00000369407 FOXO1Q12778 655 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 TMEM208Q9BTX3 173 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 VSIRQ9H7M9 311 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 ZNF665Q9H7R5 613 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 G3V3Y1 287 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 IFNL4K9M1U5 179 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 ALDH3B1P43353 468 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 ENDOGQ14249 297 aaKnown RBP10.63□□□□□ -0.71
PHGDH-201ENST00000369407 SLC25A24Q6NUK1 477 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 OR6X1Q8NH79 312 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 SYT3Q9BQG1 590 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 ZNF442Q9H7R0 627 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 TMED3Q9Y3Q3 217 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 V9GYS6 101 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 A0A1B0GW64 132 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 MPPED1O15442 326 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 HSPA12AO43301 675 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 CHST1O43916 411 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 TMEM267Q0VDI3 215 aaPredicted RBP10.63□□□□□ -0.71
PHGDH-201ENST00000369407 HIST2H3PS2Q5TEC6 136 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 TBC1D26Q86UD7 250 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 UCN2Q96RP3 112 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 RSG1Q9BU20 258 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 PLEKHF2Q9H8W4 249 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 ST3GAL6Q9Y274 331 aa10.63□□□□□ -0.71
PHGDH-201ENST00000369407 ARHGAP21Q5T5U3 1957 aa10.62□□□□□ -0.71
PHGDH-201ENST00000369407 PITX3O75364 302 aa10.62□□□□□ -0.71
PHGDH-201ENST00000369407 OR7C1O76099 320 aaPredicted RBP10.62□□□□□ -0.71
PHGDH-201ENST00000369407 MSR1P21757 451 aa10.62□□□□□ -0.71
PHGDH-201ENST00000369407 GNRHRP30968 328 aa10.62□□□□□ -0.71
PHGDH-201ENST00000369407 C1orf87Q8N0U7 546 aa10.62□□□□□ -0.71
PHGDH-201ENST00000369407 PP6455Q8WZ26 134 aa10.62□□□□□ -0.71
PHGDH-201ENST00000369407 OXGR1Q96P68 337 aa10.62□□□□□ -0.71
PHGDH-201ENST00000369407 WNT5BQ9H1J7 359 aa10.62□□□□□ -0.71
PHGDH-201ENST00000369407 A0A087WWC5 75 aa10.62□□□□□ -0.71
PHGDH-201ENST00000369407 A0A1W2PR80 420 aa10.62□□□□□ -0.71
PHGDH-201ENST00000369407 C3orf80F5H4A9 247 aa10.62□□□□□ -0.71
PHGDH-201ENST00000369407 RPL36A-HNRNPH2H7BZ11 118 aa10.62□□□□□ -0.71
PHGDH-201ENST00000369407 PPYP01298 95 aa10.62□□□□□ -0.71
PHGDH-201ENST00000369407 ARL6IP1Q15041 203 aa10.62□□□□□ -0.71
PHGDH-201ENST00000369407 ZNF506Q5JVG8 444 aa10.62□□□□□ -0.71
PHGDH-201ENST00000369407 LRTM2Q8N967 370 aa10.62□□□□□ -0.71
PHGDH-201ENST00000369407 GJC3Q8NFK1 279 aa10.62□□□□□ -0.71
PHGDH-201ENST00000369407 SLC7A10Q9NS82 523 aa10.62□□□□□ -0.71
PHGDH-201ENST00000369407 GAB2Q9UQC2 676 aa10.62□□□□□ -0.71
PHGDH-201ENST00000369407 ZNF407Q9C0G0 2248 aa10.62□□□□□ -0.71
PHGDH-201ENST00000369407 A0A1W2PPC4 97 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 A8MWP6 167 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 TRDCB7Z8K6 153 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 HSPB1P04792 205 aaKnown RBP10.61□□□□□ -0.71
PHGDH-201ENST00000369407 ZNF100Q8IYN0 542 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 MOB3AQ96BX8 217 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 CABLES2Q9BTV7 478 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 NDUFAF3Q9BU61 184 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 ZNF286AQ9HBT8 521 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 FGF21Q9NSA1 209 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 LRFN1Q9P244 771 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 A0A1B0GX78 115 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 LCATP04180 440 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 TSPAN7P41732 249 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 RPS18P62269 152 aaKnown RBP10.61□□□□□ -0.71
PHGDH-201ENST00000369407 MRPS34P82930 218 aaKnown RBP10.61□□□□□ -0.71
PHGDH-201ENST00000369407 SLC10A1Q14973 349 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 SSX7Q7RTT5 188 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 PRR18Q8N4B5 295 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 BORCS8Q96FH0 119 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 MRGPRX4Q96LA9 322 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 LYRM2Q9NU23 88 aaPredicted RBP10.61□□□□□ -0.71
PHGDH-201ENST00000369407 ABCA7Q8IZY2 2146 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 ELOA3CA0A087WX78 387 aaPredicted RBP10.61□□□□□ -0.71
PHGDH-201ENST00000369407 LILRA5A6NI73 299 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 HMGB3O15347 200 aaKnown RBP10.61□□□□□ -0.71
PHGDH-201ENST00000369407 TGOLN2O43493 480 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 IGLV3-1P01715 115 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 FGF7P21781 194 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 HNRNPKP61978 463 aaKnown RBP eCLIP10.61□□□□□ -0.713e-7■□□□□ 8.5
PHGDH-201ENST00000369407 FAM90A2PQ658T7 463 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 GAPTQ8N292 157 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 GPR137CQ8N3F9 429 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 IL22RA1Q8N6P7 574 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 OR4X1Q8NH49 305 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 C11orf1Q9H5F2 150 aa10.61□□□□□ -0.71
PHGDH-201ENST00000369407 GZMBP10144 247 aa10.6□□□□□ -0.71
PHGDH-201ENST00000369407 PTGDSP41222 190 aa10.6□□□□□ -0.71
PHGDH-201ENST00000369407 NPBWR2P48146 333 aa10.6□□□□□ -0.71
PHGDH-201ENST00000369407 LBX1P52954 281 aa10.6□□□□□ -0.71
PHGDH-201ENST00000369407 PRSS8Q16651 343 aa10.6□□□□□ -0.71
PHGDH-201ENST00000369407 RTL6Q6ICC9 239 aa10.6□□□□□ -0.71
PHGDH-201ENST00000369407 ZNF774Q6NX45 483 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms