RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 CELA2AP08217 269 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 DRD3P35462 400 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 MGAT2Q10469 447 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 MRGPRFQ96AM1 343 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 RAB40CQ96S21 281 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 PKD1L3Q7Z443 1732 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 IGHV3OR16-10A0A075B7F0 116 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 FXYD1O00168 92 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 TNFSF14O43557 240 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 PLPP2O43688 288 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 SRD5A2P31213 254 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 ID4P47928 161 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 ARRDC1Q8N5I2 433 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 OPN3Q9H1Y3 402 aaPredicted RBP15.98■□□□□ 0.15
SNX27-202ENST00000368841 CLN8Q9UBY8 286 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 IGF2P01344 180 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 TMEM33P57088 247 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 OR4D11Q8NGI4 311 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 ADAMTS17Q8TE56 1095 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 WNT16Q9UBV4 365 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 TCRBV16S1A1N1A0A5B0 115 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 GZMKP49863 264 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 IQCJQ1A5X6 159 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 LIMS2Q7Z4I7 341 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 EID2BQ96D98 161 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 OR6C3Q9NZP0 311 aa15.98■□□□□ 0.15
SNX27-202ENST00000368841 GUCA2BQ16661 112 aa15.97■□□□□ 0.15
SNX27-202ENST00000368841 THYN1Q9P016 225 aa15.97■□□□□ 0.15
SNX27-202ENST00000368841 MFNGO00587 321 aa15.97■□□□□ 0.15
SNX27-202ENST00000368841 PSG2P11465 335 aa15.97■□□□□ 0.15
SNX27-202ENST00000368841 SLC26A10Q8NG04 563 aa15.97■□□□□ 0.15
SNX27-202ENST00000368841 DTD1Q8TEA8 209 aa15.97■□□□□ 0.15
SNX27-202ENST00000368841 C11orf94C9JXX5 98 aa15.97■□□□□ 0.15
SNX27-202ENST00000368841 OR4S2Q8NH73 311 aa15.97■□□□□ 0.15
SNX27-202ENST00000368841 ASB13Q8WXK3 278 aa15.97■□□□□ 0.15
SNX27-202ENST00000368841 DPH3Q96FX2 82 aa15.97■□□□□ 0.15
SNX27-202ENST00000368841 FAM210BQ96KR6 192 aa15.97■□□□□ 0.15
SNX27-202ENST00000368841 TJP1Q07157 1748 aa15.97■□□□□ 0.15
SNX27-202ENST00000368841 AHDC1Q5TGY3 1603 aaPredicted RBP15.97■□□□□ 0.15
SNX27-202ENST00000368841 SRSF10O75494 262 aaKnown RBP15.97■□□□□ 0.15
SNX27-202ENST00000368841 P01737 135 aa15.97■□□□□ 0.15
SNX27-202ENST00000368841 TWIST1Q15672 202 aa15.97■□□□□ 0.15
SNX27-202ENST00000368841 AMDHD2Q9Y303 409 aa15.97■□□□□ 0.15
SNX27-202ENST00000368841 ADRA2AP08913 450 aa15.97■□□□□ 0.15
SNX27-202ENST00000368841 RPS4Y1P22090 263 aaKnown RBP15.97■□□□□ 0.15
SNX27-202ENST00000368841 SH2D5Q6ZV89 423 aa15.97■□□□□ 0.15
SNX27-202ENST00000368841 C16orf82Q7Z2V1 217 aa15.97■□□□□ 0.15
SNX27-202ENST00000368841 ZNF764Q96H86 408 aaPredicted RBP15.97■□□□□ 0.15
SNX27-202ENST00000368841 GFRA1P56159 465 aa15.96■□□□□ 0.15
SNX27-202ENST00000368841 RANP62826 216 aaKnown RBP15.96■□□□□ 0.15
SNX27-202ENST00000368841 SLC35B1P78383 322 aa15.96■□□□□ 0.15
SNX27-202ENST00000368841 CDC20Q12834 499 aa15.96■□□□□ 0.15
SNX27-202ENST00000368841 C10orf113Q5VZT2 155 aa15.96■□□□□ 0.15
SNX27-202ENST00000368841 MSRB3Q8IXL7 192 aa15.96■□□□□ 0.15
SNX27-202ENST00000368841 LINC01387J3KSC0 135 aa15.96■□□□□ 0.15
SNX27-202ENST00000368841 PGA3P0DJD8 388 aa15.96■□□□□ 0.15
SNX27-202ENST00000368841 TMEM183BQ1AE95 376 aa15.96■□□□□ 0.15
SNX27-202ENST00000368841 VN1R4Q7Z5H5 301 aa15.96■□□□□ 0.15
SNX27-202ENST00000368841 LRRC75AQ8NAA5 344 aa15.96■□□□□ 0.15
SNX27-202ENST00000368841 SSBP1Q04837 148 aaKnown RBP15.96■□□□□ 0.15
SNX27-202ENST00000368841 PRDM14Q9GZV8 571 aa15.96■□□□□ 0.15
SNX27-202ENST00000368841 INPP5JQ15735 1006 aaPredicted RBP15.96■□□□□ 0.15
SNX27-202ENST00000368841 APOBEC4Q8WW27 367 aaKnown RBP15.96■□□□□ 0.15
SNX27-202ENST00000368841 HARBI1Q96MB7 349 aa15.96■□□□□ 0.15
SNX27-202ENST00000368841 PARP11Q9NR21 331 aa15.96■□□□□ 0.15
SNX27-202ENST00000368841 IGKV3OR2-268A0A0C4DH90 116 aa15.96■□□□□ 0.14
SNX27-202ENST00000368841 HELTA6NFD8 242 aa15.96■□□□□ 0.14
SNX27-202ENST00000368841 OR2T8A6NH00 312 aa15.96■□□□□ 0.14
SNX27-202ENST00000368841 SEMA7AO75326 666 aa15.96■□□□□ 0.14
SNX27-202ENST00000368841 FAM157CP0CG43 387 aa15.96■□□□□ 0.14
SNX27-202ENST00000368841 CD81P60033 236 aa15.96■□□□□ 0.14
SNX27-202ENST00000368841 XAF1Q6GPH4 301 aa15.96■□□□□ 0.14
SNX27-202ENST00000368841 MDP1Q86V88 176 aa15.96■□□□□ 0.14
SNX27-202ENST00000368841 MDKP21741 143 aaPredicted RBP15.95■□□□□ 0.14
SNX27-202ENST00000368841 SPRED2Q7Z698 418 aa15.95■□□□□ 0.14
SNX27-202ENST00000368841 SLC35B3Q9H1N7 401 aa15.95■□□□□ 0.14
SNX27-202ENST00000368841 MELTFP08582 738 aa15.95■□□□□ 0.14
SNX27-202ENST00000368841 C19orf35Q6ZS72 473 aa15.95■□□□□ 0.14
SNX27-202ENST00000368841 ZAR1Q86SH2 424 aa15.95■□□□□ 0.14
SNX27-202ENST00000368841 OR1L1Q8NH94 360 aa15.95■□□□□ 0.14
SNX27-202ENST00000368841 ZNF707Q96C28 371 aaPredicted RBP15.95■□□□□ 0.14
SNX27-202ENST00000368841 ZNF638Q14966 1978 aaKnown RBP15.95■□□□□ 0.14
SNX27-202ENST00000368841 LOXL3P58215 753 aa15.95■□□□□ 0.14
SNX27-202ENST00000368841 NUBPLQ8TB37 319 aa15.95■□□□□ 0.14
SNX27-202ENST00000368841 CD300CQ08708 224 aa15.95■□□□□ 0.14
SNX27-202ENST00000368841 C19orf48Q6RUI8 117 aa15.95■□□□□ 0.14
SNX27-202ENST00000368841 NUFIP2Q7Z417 695 aaKnown RBP15.95■□□□□ 0.14
SNX27-202ENST00000368841 ATG2BQ96BY7 2078 aa15.95■□□□□ 0.14
SNX27-202ENST00000368841 RBFOX3A6NFN3 312 aa15.95■□□□□ 0.14
SNX27-202ENST00000368841 SLC6A1P30531 599 aa15.95■□□□□ 0.14
SNX27-202ENST00000368841 COL8A1P27658 744 aa15.95■□□□□ 0.14
SNX27-202ENST00000368841 RPL24P83731 157 aaKnown RBP15.95■□□□□ 0.14
SNX27-202ENST00000368841 OR2J1Q9GZK6 312 aa15.95■□□□□ 0.14
SNX27-202ENST00000368841 NTMQ9P121 344 aa15.95■□□□□ 0.14
SNX27-202ENST00000368841 DOCK1Q14185 1865 aa15.94■□□□□ 0.14
SNX27-202ENST00000368841 HOXA4Q00056 320 aaPredicted RBP15.94■□□□□ 0.14
SNX27-202ENST00000368841 DOLPP1Q86YN1 238 aa15.94■□□□□ 0.14
SNX27-202ENST00000368841 MTFP1Q9UDX5 166 aa15.94■□□□□ 0.14
SNX27-202ENST00000368841 CCL8P80075 99 aa15.94■□□□□ 0.14
SNX27-202ENST00000368841 CLEC18BQ6UXF7 455 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms