RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 PTGES3LE9PB15 166 aa15.31■□□□□ 0.04
CKS1B-203ENST00000368439 MYF6P23409 242 aa15.31■□□□□ 0.04
CKS1B-203ENST00000368439 SLC35A2P78381 396 aa15.31■□□□□ 0.04
CKS1B-203ENST00000368439 PAX5Q02548 391 aa15.31■□□□□ 0.04
CKS1B-203ENST00000368439 IRF3Q14653 427 aa15.31■□□□□ 0.04
CKS1B-203ENST00000368439 C17orf58Q2M2W7 97 aa15.31■□□□□ 0.04
CKS1B-203ENST00000368439 PRR31Q5SQ13 230 aa15.31■□□□□ 0.04
CKS1B-203ENST00000368439 PRAMEF5Q5TYX0 476 aa15.31■□□□□ 0.04
CKS1B-203ENST00000368439 OR5M11Q96RB7 305 aa15.31■□□□□ 0.04
CKS1B-203ENST00000368439 CITED1Q99966 193 aa15.31■□□□□ 0.04
CKS1B-203ENST00000368439 ANKRD60Q9BZ19 345 aa15.31■□□□□ 0.04
CKS1B-203ENST00000368439 GAL3ST2Q9H3Q3 398 aa15.31■□□□□ 0.04
CKS1B-203ENST00000368439 NCOR1P1Q9H4R4 102 aa15.31■□□□□ 0.04
CKS1B-203ENST00000368439 ZNF696Q9H7X3 374 aa15.31■□□□□ 0.04
CKS1B-203ENST00000368439 IFT22Q9H7X7 185 aa15.31■□□□□ 0.04
CKS1B-203ENST00000368439 FOXJ3Q9UPW0 622 aa15.31■□□□□ 0.04
CKS1B-203ENST00000368439 RNF114Q9Y508 228 aa15.31■□□□□ 0.04
CKS1B-203ENST00000368439 MGAM2Q2M2H8 2515 aa15.31■□□□□ 0.04
CKS1B-203ENST00000368439 A0A1W2PP11 408 aa15.3■□□□□ 0.04
CKS1B-203ENST00000368439 HSPB6O14558 160 aa15.3■□□□□ 0.04
CKS1B-203ENST00000368439 CDK2P24941 298 aa15.3■□□□□ 0.04
CKS1B-203ENST00000368439 RBM11P57052 281 aaKnown RBP15.3■□□□□ 0.04
CKS1B-203ENST00000368439 DYNC1I2Q13409 638 aaKnown RBP15.3■□□□□ 0.04
CKS1B-203ENST00000368439 PAN3Q58A45 887 aaKnown RBP15.3■□□□□ 0.04
CKS1B-203ENST00000368439 UTF1Q5T230 341 aa15.3■□□□□ 0.04
CKS1B-203ENST00000368439 RSBN1Q5VWQ0 802 aaPredicted RBP15.3■□□□□ 0.04
CKS1B-203ENST00000368439 SLC35E4Q6ICL7 350 aa15.3■□□□□ 0.04
CKS1B-203ENST00000368439 OSR2Q8N2R0 312 aa15.3■□□□□ 0.04
CKS1B-203ENST00000368439 OR4P4Q8NGL7 312 aa15.3■□□□□ 0.04
CKS1B-203ENST00000368439 PLPPR1Q8TBJ4 325 aa15.3■□□□□ 0.04
CKS1B-203ENST00000368439 FOXRED1Q96CU9 486 aaPredicted RBP15.3■□□□□ 0.04
CKS1B-203ENST00000368439 MND1Q9BWT6 205 aa15.3■□□□□ 0.04
CKS1B-203ENST00000368439 CLEC7AQ9BXN2 247 aa15.3■□□□□ 0.04
CKS1B-203ENST00000368439 DUSP21Q9H596 190 aa15.3■□□□□ 0.04
CKS1B-203ENST00000368439 ING3Q9NXR8 418 aa15.3■□□□□ 0.04
CKS1B-203ENST00000368439 CKLFQ9UBR5 152 aa15.3■□□□□ 0.04
CKS1B-203ENST00000368439 ST3GAL6Q9Y274 331 aa15.3■□□□□ 0.04
CKS1B-203ENST00000368439 CHST1O43916 411 aa15.29■□□□□ 0.04
CKS1B-203ENST00000368439 JUNBP17275 347 aaPredicted RBP15.29■□□□□ 0.04
CKS1B-203ENST00000368439 CD34P28906 385 aa15.29■□□□□ 0.04
CKS1B-203ENST00000368439 RAB13P51153 203 aa15.29■□□□□ 0.04
CKS1B-203ENST00000368439 GP2P55259 537 aaKnown RBP15.29■□□□□ 0.04
CKS1B-203ENST00000368439 INSL4Q14641 139 aa15.29■□□□□ 0.04
CKS1B-203ENST00000368439 SSX2Q16385 188 aa15.29■□□□□ 0.04
CKS1B-203ENST00000368439 MINOS1Q5TGZ0 78 aa15.29■□□□□ 0.04
CKS1B-203ENST00000368439 CCBE1Q6UXH8 406 aaPredicted RBP15.29■□□□□ 0.04
CKS1B-203ENST00000368439 UNQ9370/PRO34162Q6UXP9 181 aa15.29■□□□□ 0.04
CKS1B-203ENST00000368439 MYDGFQ969H8 173 aa15.29■□□□□ 0.04
CKS1B-203ENST00000368439 SCN3BQ9NY72 215 aa15.29■□□□□ 0.04
CKS1B-203ENST00000368439 KIF25Q9UIL4 384 aa15.29■□□□□ 0.04
CKS1B-203ENST00000368439 MINOS1-NBL1R4GNA1 71 aa15.29■□□□□ 0.04
CKS1B-203ENST00000368439 A0A087X0M5 115 aa15.28■□□□□ 0.04
CKS1B-203ENST00000368439 A0A1B0GX30 115 aa15.28■□□□□ 0.04
CKS1B-203ENST00000368439 ZNF729A6NN14 1252 aaPredicted RBP15.28■□□□□ 0.04
CKS1B-203ENST00000368439 GEMIN2O14893 280 aaKnown RBP15.28■□□□□ 0.04
CKS1B-203ENST00000368439 ZNF780AO75290 641 aaPredicted RBP15.28■□□□□ 0.04
CKS1B-203ENST00000368439 IGLV1-47P01700 117 aa15.28■□□□□ 0.04
CKS1B-203ENST00000368439 SERPINA2P20848 420 aa15.28■□□□□ 0.04
CKS1B-203ENST00000368439 DYNLT3P51808 116 aa15.28■□□□□ 0.04
CKS1B-203ENST00000368439 FAM189A2Q15884 450 aa15.28■□□□□ 0.04
CKS1B-203ENST00000368439 PLA1AQ53H76 456 aa15.28■□□□□ 0.04
CKS1B-203ENST00000368439 OR52W1Q6IF63 320 aa15.28■□□□□ 0.04
CKS1B-203ENST00000368439 RTN4RL2Q86UN3 420 aa15.28■□□□□ 0.04
CKS1B-203ENST00000368439 CDH26Q8IXH8 852 aa15.28■□□□□ 0.04
CKS1B-203ENST00000368439 ABHD12Q8N2K0 398 aa15.28■□□□□ 0.04
CKS1B-203ENST00000368439 SUMF2Q8NBJ7 301 aa15.28■□□□□ 0.04
CKS1B-203ENST00000368439 OR13A1Q8NGR1 328 aa15.28■□□□□ 0.04
CKS1B-203ENST00000368439 MUL1Q969V5 352 aa15.28■□□□□ 0.04
CKS1B-203ENST00000368439 DPCDQ9BVM2 203 aaPredicted RBP15.28■□□□□ 0.04
CKS1B-203ENST00000368439 LINC00574Q9H8X3 128 aa15.28■□□□□ 0.04
CKS1B-203ENST00000368439 ZNF286AQ9HBT8 521 aa15.28■□□□□ 0.04
CKS1B-203ENST00000368439 OR6C3Q9NZP0 311 aa15.28■□□□□ 0.04
CKS1B-203ENST00000368439 TCF19Q9Y242 345 aa15.28■□□□□ 0.04
CKS1B-203ENST00000368439 KBTBD11-OT1A0A1B0GTJ5 212 aa15.27■□□□□ 0.04
CKS1B-203ENST00000368439 A6NDX4 124 aa15.27■□□□□ 0.04
CKS1B-203ENST00000368439 H0YHG0 523 aa15.27■□□□□ 0.04
CKS1B-203ENST00000368439 CSTBP04080 98 aaKnown RBP15.27■□□□□ 0.04
CKS1B-203ENST00000368439 MAS1P04201 325 aa15.27■□□□□ 0.04
CKS1B-203ENST00000368439 KCNJ3P48549 501 aa15.27■□□□□ 0.04
CKS1B-203ENST00000368439 SPHARQ15513 63 aa15.27■□□□□ 0.04
CKS1B-203ENST00000368439 LIAT1Q6ZQX7 453 aa15.27■□□□□ 0.04
CKS1B-203ENST00000368439 LINC00596Q86U02 117 aa15.27■□□□□ 0.04
CKS1B-203ENST00000368439 OR4D6Q8NGJ1 314 aa15.27■□□□□ 0.04
CKS1B-203ENST00000368439 S100A13Q99584 98 aa15.27■□□□□ 0.04
CKS1B-203ENST00000368439 BARHL1Q9BZE3 327 aa15.27■□□□□ 0.04
CKS1B-203ENST00000368439 FBLN5Q9UBX5 448 aa15.27■□□□□ 0.04
CKS1B-203ENST00000368439 HILPDAQ9Y5L2 63 aa15.27■□□□□ 0.04
CKS1B-203ENST00000368439 MEIKINA0A087WXM9 373 aa15.26■□□□□ 0.03
CKS1B-203ENST00000368439 FAM172BPA6NC97 362 aa15.26■□□□□ 0.03
CKS1B-203ENST00000368439 SC5DO75845 299 aa15.26■□□□□ 0.03
CKS1B-203ENST00000368439 OR7C1O76099 320 aaPredicted RBP15.26■□□□□ 0.03
CKS1B-203ENST00000368439 HTR1DP28221 377 aa15.26■□□□□ 0.03
CKS1B-203ENST00000368439 KIR2DS4P43632 304 aa15.26■□□□□ 0.03
CKS1B-203ENST00000368439 MPV17LQ2QL34 196 aa15.26■□□□□ 0.03
CKS1B-203ENST00000368439 SLC22A6Q4U2R8 563 aa15.26■□□□□ 0.03
CKS1B-203ENST00000368439 GLIPR1L1Q6UWM5 242 aa15.26■□□□□ 0.03
CKS1B-203ENST00000368439 IZUMO2Q6UXV1 221 aa15.26■□□□□ 0.03
CKS1B-203ENST00000368439 JAGN1Q8N5M9 183 aa15.26■□□□□ 0.03
CKS1B-203ENST00000368439 MS4A15Q8N5U1 240 aa15.26■□□□□ 0.03
CKS1B-203ENST00000368439 THRSPQ92748 146 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms