RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 FOXF1Q12946 379 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 H1FNTQ75WM6 255 aaPredicted RBP11.06□□□□□ -0.64
VAMP1-201ENST00000361716 GRINAQ7Z429 371 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 SLC35E3Q7Z769 313 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 SLC38A9Q8NBW4 561 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 BEND2Q8NDZ0 799 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 TMEM234Q8WY98 164 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 NAT6Q93015 286 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 FAM103A1Q9BTL3 118 aaKnown RBP11.06□□□□□ -0.64
VAMP1-201ENST00000361716 SLC2A9Q9NRM0 540 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 A0A087WWC5 75 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 CRYM-AS1A6NIL9 109 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 ZNF774Q6NX45 483 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 C9orf40Q8IXQ3 194 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 FBXL14Q8N1E6 418 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 OR8B12Q8NGG6 310 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 TMEM171Q8WVE6 324 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 ADGRG7Q96K78 797 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 HPRT1P00492 218 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 GCGP01275 180 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 OPN1MWP04001 364 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 TK1P04183 234 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 OPN1MW2P0DN77 364 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 OPN1MW3P0DN78 364 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 HSD11B2P80365 405 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 ZNF92Q03936 586 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.06□□□□□ -0.64
VAMP1-201ENST00000361716 IZUMO4Q1ZYL8 232 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 LHFPL1Q86WI0 220 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 POC1BQ8TC44 478 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 LRRC61Q9BV99 259 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 PLEK2Q9NYT0 353 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 TUBD1Q9UJT1 453 aa11.06□□□□□ -0.64
VAMP1-201ENST00000361716 GRIFINA4D1Z8 144 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 ADAM20O43506 726 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 HSPB1P04792 205 aaKnown RBP11.05□□□□□ -0.64
VAMP1-201ENST00000361716 GUSBP08236 651 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 ANOS1P23352 680 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 DAP3P51398 398 aaKnown RBP11.05□□□□□ -0.64
VAMP1-201ENST00000361716 PTTG1IPP53801 180 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 CARD18P57730 90 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 GABREP78334 506 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 TMEM41BQ5BJD5 291 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 ERASQ7Z444 233 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 OR2AE1Q8NHA4 323 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 CLDND2Q8NHS1 167 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 VN1R17PQ8TDU5 208 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 HOXB13Q92826 284 aaPredicted RBP11.05□□□□□ -0.64
VAMP1-201ENST00000361716 SYT3Q9BQG1 590 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 NAGKQ9UJ70 344 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 A6NCN8 305 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 OR2J2O76002 312 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 CTSDP07339 412 aaPredicted RBP11.05□□□□□ -0.64
VAMP1-201ENST00000361716 HNRNPKP61978 463 aaKnown RBP eCLIP11.05□□□□□ -0.64
VAMP1-201ENST00000361716 WDFY1Q8IWB7 410 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 TMEM252Q8N6L7 170 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 ZNF319Q9P2F9 582 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 CD207Q9UJ71 328 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 SHISA7A6NL88 538 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 HBE1P02100 147 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 PATE4P0C8F1 98 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 GABRG2P18507 467 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 MTCP1P56278 107 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 CLDN17P56750 224 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 RPS16P62249 146 aaKnown RBP11.05□□□□□ -0.64
VAMP1-201ENST00000361716 DPPA3Q6W0C5 159 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 OR5AS1Q8N127 324 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 EXTL1Q92935 676 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 BOD1Q96IK1 185 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 ANXA10Q9UJ72 324 aa11.05□□□□□ -0.64
VAMP1-201ENST00000361716 RALGAPA1Q6GYQ0 2036 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 C5orf63A6NC05 138 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 C5orf67F2Z3F1 127 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 RPL36A-HNRNPH2H7BZ11 118 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 IAPPP10997 89 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 CD82P27701 267 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 SUCLG1P53597 346 aaKnown RBP11.04□□□□□ -0.64
VAMP1-201ENST00000361716 TDRG1Q3Y452 100 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 LIAT1Q6ZQX7 453 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 TMEM256Q8N2U0 113 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 LIME1Q9H400 295 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 ZNF442Q9H7R0 627 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 FAM206AQ9NX38 181 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 ICE1Q9Y2F5 2266 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 C2orf16Q68DN1 1984 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 ZNF320A2RRD8 509 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 MT-ATP6P00846 226 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 POU2F2P09086 479 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 ZNF16P17020 682 aaPredicted RBP11.04□□□□□ -0.64
VAMP1-201ENST00000361716 MAS1LP35410 378 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 IL13RA2Q14627 380 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 TDHQ8IZJ6 230 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 ARHGEF39Q8N4T4 335 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 ZNF709Q8N972 641 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 RBMXL1Q96E39 390 aaKnown RBP11.04□□□□□ -0.64
VAMP1-201ENST00000361716 ZNF845Q96IR2 970 aaPredicted RBP11.04□□□□□ -0.64
VAMP1-201ENST00000361716 ACTR3CQ9C0K3 210 aaPredicted RBP11.04□□□□□ -0.64
VAMP1-201ENST00000361716 VSIRQ9H7M9 311 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 GLRX2Q9NS18 164 aa11.04□□□□□ -0.64
VAMP1-201ENST00000361716 CLEC1BQ9P126 229 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms