RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 HEXAP06865 529 aa19.34■□□□□ 0.69
LDB1-201ENST00000361198 PVALBP20472 110 aaPredicted RBP19.34■□□□□ 0.69
LDB1-201ENST00000361198 NUBP1P53384 320 aa19.34■□□□□ 0.69
LDB1-201ENST00000361198 TCF15Q12870 199 aa19.34■□□□□ 0.69
LDB1-201ENST00000361198 SPATA46Q5T0L3 261 aa19.34■□□□□ 0.69
LDB1-201ENST00000361198 UBAC2Q8NBM4 344 aa19.34■□□□□ 0.69
LDB1-201ENST00000361198 OR5P3Q8WZ94 311 aa19.34■□□□□ 0.69
LDB1-201ENST00000361198 NAA60Q9H7X0 242 aa19.34■□□□□ 0.69
LDB1-201ENST00000361198 POMT1Q9Y6A1 747 aa19.34■□□□□ 0.69
LDB1-201ENST00000361198 CELA3BP08861 270 aa19.33■□□□□ 0.68
LDB1-201ENST00000361198 ZNF728P0DKX0 622 aa19.33■□□□□ 0.68
LDB1-201ENST00000361198 IGHV1-2P23083 117 aa19.33■□□□□ 0.68
LDB1-201ENST00000361198 PMELP40967 661 aa19.33■□□□□ 0.68
LDB1-201ENST00000361198 OR2T2Q6IF00 324 aa19.33■□□□□ 0.68
LDB1-201ENST00000361198 ARV1Q9H2C2 271 aa19.33■□□□□ 0.68
LDB1-201ENST00000361198 FAM86C1Q9NVL1 165 aa19.33■□□□□ 0.68
LDB1-201ENST00000361198 FAM90A10PA6NDY2 464 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 FAM90A18PA6NE21 464 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 FAM90A16PA6NEW6 464 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 FAM90A20PA6NIJ5 464 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 FAM90A8PA6NJQ4 464 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 FAM90A7PA6NKC0 464 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 ANKRD30BLA7E2S9 258 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 FAM90A22PA8MWA6 464 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 FAM90A12PA8MX19 464 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 FAM90A5PA8MXJ8 464 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 FAM90A23PA8MXZ1 464 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 FAM90A15PP0C7V4 464 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 FAM90A13PP0C7W8 464 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 FAM90A14PP0C7W9 464 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 FAM90A24PP0C7X0 464 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 F2RL1P55085 397 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 FXYD4P59646 89 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 DEFB109BQ30KR1 87 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 IGF2-ASQ6U949 168 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 RTN4IP1Q8WWV3 396 aaPredicted RBP19.32■□□□□ 0.68
LDB1-201ENST00000361198 EXTL1Q92935 676 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 TRAV17A0A0B4J275 112 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 TRAPPC2LH3BP13 241 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 MKXQ8IYA7 352 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 OR5L1Q8NGL2 311 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 SUCNR1Q9BXA5 334 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 GLRX2Q9NS18 164 aa19.32■□□□□ 0.68
LDB1-201ENST00000361198 FBXO24O75426 580 aa19.31■□□□□ 0.68
LDB1-201ENST00000361198 LYZL6O75951 148 aa19.31■□□□□ 0.68
LDB1-201ENST00000361198 OR5AC1P0C628 307 aa19.31■□□□□ 0.68
LDB1-201ENST00000361198 ZNF14P17017 642 aaPredicted RBP19.31■□□□□ 0.68
LDB1-201ENST00000361198 FAM214BQ7L5A3 538 aa19.31■□□□□ 0.68
LDB1-201ENST00000361198 LINC00518Q8N0U6 118 aa19.31■□□□□ 0.68
LDB1-201ENST00000361198 ZFP57Q9NU63 452 aa19.31■□□□□ 0.68
LDB1-201ENST00000361198 LSM5Q9Y4Y9 91 aaKnown RBP19.31■□□□□ 0.68
LDB1-201ENST00000361198 MPC1Q9Y5U8 109 aa19.31■□□□□ 0.68
LDB1-201ENST00000361198 ZFHX2Q9C0A1 2572 aaPredicted RBP19.31■□□□□ 0.68
LDB1-201ENST00000361198 SVILO95425 2214 aa19.31■□□□□ 0.68
LDB1-201ENST00000361198 E5RGE8 158 aa19.31■□□□□ 0.68
LDB1-201ENST00000361198 MBPP02686 304 aaPredicted RBP19.31■□□□□ 0.68
LDB1-201ENST00000361198 TBC1D28Q2M2D7 210 aa19.31■□□□□ 0.68
LDB1-201ENST00000361198 IQCF2Q8IXL9 164 aa19.31■□□□□ 0.68
LDB1-201ENST00000361198 MLXQ9UH92 298 aa19.31■□□□□ 0.68
LDB1-201ENST00000361198 NSG2Q9Y328 171 aa19.31■□□□□ 0.68
LDB1-201ENST00000361198 FAM157AC9JC47 383 aa19.3■□□□□ 0.68
LDB1-201ENST00000361198 H7C1Q1 480 aa19.3■□□□□ 0.68
LDB1-201ENST00000361198 CA6P23280 308 aa19.3■□□□□ 0.68
LDB1-201ENST00000361198 DUSP1P28562 367 aa19.3■□□□□ 0.68
LDB1-201ENST00000361198 UCP3P55916 312 aa19.3■□□□□ 0.68
LDB1-201ENST00000361198 SP6Q3SY56 376 aa19.3■□□□□ 0.68
LDB1-201ENST00000361198 C18orf12Q96KH6 178 aa19.3■□□□□ 0.68
LDB1-201ENST00000361198 ZNF488Q96MN9 340 aa19.3■□□□□ 0.68
LDB1-201ENST00000361198 BOD1L1Q8NFC6 3051 aa19.3■□□□□ 0.68
LDB1-201ENST00000361198 SFTA3P0C7M3 94 aa19.3■□□□□ 0.68
LDB1-201ENST00000361198 TGFBR3Q03167 851 aa19.3■□□□□ 0.68
LDB1-201ENST00000361198 IGFBP7Q16270 282 aa19.3■□□□□ 0.68
LDB1-201ENST00000361198 ABCA11PQ4W5N1 156 aa19.3■□□□□ 0.68
LDB1-201ENST00000361198 ERGIC1Q969X5 290 aa19.3■□□□□ 0.68
LDB1-201ENST00000361198 SLC2A9Q9NRM0 540 aa19.3■□□□□ 0.68
LDB1-201ENST00000361198 DVL1P1P54792 670 aaPredicted RBP19.29■□□□□ 0.68
LDB1-201ENST00000361198 GUSBP1Q15486 140 aa19.29■□□□□ 0.68
LDB1-201ENST00000361198 IGSF11Q5DX21 431 aa19.29■□□□□ 0.68
LDB1-201ENST00000361198 LIAT1Q6ZQX7 453 aa19.29■□□□□ 0.68
LDB1-201ENST00000361198 C5orf24Q7Z6I8 188 aa19.29■□□□□ 0.68
LDB1-201ENST00000361198 MSI2Q96DH6 328 aaKnown RBP19.29■□□□□ 0.68
LDB1-201ENST00000361198 C3orf80F5H4A9 247 aa19.28■□□□□ 0.68
LDB1-201ENST00000361198 AQP7O14520 342 aa19.28■□□□□ 0.68
LDB1-201ENST00000361198 HSPB6O14558 160 aa19.28■□□□□ 0.68
LDB1-201ENST00000361198 IDH3GP51553 393 aaPredicted RBP19.28■□□□□ 0.68
LDB1-201ENST00000361198 UBE2NP61088 152 aaKnown RBP19.28■□□□□ 0.68
LDB1-201ENST00000361198 GNG3P63215 75 aa19.28■□□□□ 0.68
LDB1-201ENST00000361198 Q6ZRG5 221 aa19.28■□□□□ 0.68
LDB1-201ENST00000361198 CNEP1R1Q8N9A8 125 aa19.28■□□□□ 0.68
LDB1-201ENST00000361198 MOB3AQ96BX8 217 aa19.28■□□□□ 0.68
LDB1-201ENST00000361198 SAV1Q9H4B6 383 aaPredicted RBP19.28■□□□□ 0.68
LDB1-201ENST00000361198 DSPP15924 2871 aaKnown RBP19.28■□□□□ 0.68
LDB1-201ENST00000361198 CACNA1GO43497 2377 aa19.28■□□□□ 0.68
LDB1-201ENST00000361198 OR5B21A6NL26 309 aa19.28■□□□□ 0.68
LDB1-201ENST00000361198 PRKACAP17612 351 aa19.28■□□□□ 0.68
LDB1-201ENST00000361198 TSC22D1Q15714 1073 aa19.28■□□□□ 0.68
LDB1-201ENST00000361198 MPV17LQ2QL34 196 aa19.28■□□□□ 0.68
LDB1-201ENST00000361198 LYZL2Q7Z4W2 148 aa19.28■□□□□ 0.68
LDB1-201ENST00000361198 ZNF573Q86YE8 665 aa19.28■□□□□ 0.68
LDB1-201ENST00000361198 GLYATL2Q8WU03 294 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms