RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 COL19A1Q14993 1142 aa11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 ARL6IP6Q8N6S5 226 aa11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 NOXO1Q8NFA2 376 aa11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 ADAMTS17Q8TE56 1095 aa11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 RLN3Q8WXF3 142 aa11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 ROBO4Q8WZ75 1007 aa11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 ANKRD10Q9NXR5 420 aa11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 CACNG5Q9UF02 275 aa11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 CLDN18P56856 261 aa11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 SLC35B1P78383 322 aa11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 C16orf82Q7Z2V1 217 aa11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 OR11H7Q8NGC8 314 aa11.77□□□□□ -0.53
SRGAP3-201ENST00000360413 P01737 135 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 FAHP16930 419 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 TRGV5A0A0B4J1U4 118 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 NDUFS8O00217 210 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 SS18L1O75177 396 aaPredicted RBP11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 EIF3GO75821 320 aaKnown RBP eCLIP11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 SKP2Q13309 424 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 OTPQ5XKR4 325 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 ASB5Q8WWX0 329 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 C10orf35Q96D05 121 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 DMRT1Q9Y5R6 373 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 ST6GAL1P15907 406 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 ORM2P19652 201 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 ZXDAP98168 799 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 CST9Q5W186 159 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 RBM38Q9H0Z9 239 aaKnown RBP11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 DEFB127Q9H1M4 99 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 NPTNQ9Y639 398 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 OR2W5A6NFC9 320 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 NTHL1P78549 312 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 C17orf99Q6UX52 265 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 STPG3Q8N7X2 389 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 OR4B1Q8NGF8 309 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 OR8B3Q8NGG8 313 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 OR8B2Q96RD0 313 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 B3GALT4O96024 378 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 OR4A8P0C604 315 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 BSGP35613 385 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 DEFB109BQ30KR1 87 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 SPINK9Q5DT21 86 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 MRGPREQ86SM8 312 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 OR5M9Q8NGP3 310 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 DEFB108BQ8NET1 73 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 BAHD1Q8TBE0 780 aaPredicted RBP11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 RPS4Y2Q8TD47 263 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 DOK5Q9P104 306 aa11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 DDX60LQ5H9U9 1706 aaKnown RBP11.76□□□□□ -0.53
SRGAP3-201ENST00000360413 F11P03951 625 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 TMEM215Q68D42 235 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 FOXJ2Q9P0K8 574 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 CXorf51AA0A1B0GTR3 108 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 PLPP2O43688 288 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 DNAL4O96015 105 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 LINC00596Q86U02 117 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 CALHM1Q8IU99 346 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 ZMIZ1Q9ULJ6 1067 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 GNG7O60262 68 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 NRSN2Q9GZP1 204 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 WDR13Q9H1Z4 485 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 SLC26A1Q9H2B4 701 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 CDC42EP3Q9UKI2 254 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 SMPD2O60906 423 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 CEACAM6P40199 344 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 FNDC7Q5VTL7 733 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 TMEM174Q8WUU8 243 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 TAF1P21675 1872 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 RREB1Q92766 1687 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 LILRA5A6NI73 299 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 SOD3P08294 240 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 TP53I13Q8NBR0 393 aaPredicted RBP11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 Q8WTZ3 238 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 DUSP2Q05923 314 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 IL24Q13007 206 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 TBC1D26Q86UD7 250 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 FAM219AQ8IW50 185 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 SPPL3Q8TCT6 385 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 ANKRD20A5PA0PJZ0 165 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 FAM169BQ8N8A8 192 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 SLC25A40Q8TBP6 338 aa11.75□□□□□ -0.53
SRGAP3-201ENST00000360413 PHF3Q92576 2039 aaKnown RBP11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 NRAPQ86VF7 1730 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 LOC389332A0A1B0GUA5 103 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 HIST1H1DP16402 221 aaKnown RBP11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 CCSMST1Q4G0I0 132 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 TMEM70Q9BUB7 260 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 A4GNTQ9UNA3 340 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 MYLKQ15746 1914 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 SDK2Q58EX2 2172 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 DHRS3O75911 302 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 ZGLP1P0C6A0 271 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 RTN4RL1Q86UN2 441 aaPredicted RBP11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 C10orf126Q8N4M7 172 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 GPBAR1Q8TDU6 330 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 SNRNP40Q96DI7 357 aaKnown RBP11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 MRGPRX1Q96LB2 322 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 LRP12Q9Y561 859 aa11.74□□□□□ -0.53
SRGAP3-201ENST00000360413 CD1BP29016 333 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms