RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 CST2P09228 141 aa12.02□□□□□ -0.48
VCP-201ENST00000358901 C3AR1Q16581 482 aa12.02□□□□□ -0.48
VCP-201ENST00000358901 GUCA2BQ16661 112 aa12.02□□□□□ -0.48
VCP-201ENST00000358901 BSXQ3C1V8 233 aa12.02□□□□□ -0.48
VCP-201ENST00000358901 LPAR5Q9H1C0 372 aa12.02□□□□□ -0.48
VCP-201ENST00000358901 TCFL5Q9UL49 500 aa12.02□□□□□ -0.48
VCP-201ENST00000358901 POLEQ07864 2286 aa12.02□□□□□ -0.48
VCP-201ENST00000358901 C3orf80F5H4A9 247 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 SEMA7AO75326 666 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 MT-CO3P00414 261 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 FSTP19883 344 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 CNN1P51911 297 aaKnown RBP12.02□□□□□ -0.49
VCP-201ENST00000358901 TOMM20LQ6UXN7 152 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 HES4Q9HCC6 221 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 XKRY2A2RUG3 117 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 HRASP01112 189 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 OPN1MWP04001 364 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 OPN1MW2P0DN77 364 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 OPN1MW3P0DN78 364 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 SUMO1P63165 101 aaKnown RBP12.02□□□□□ -0.49
VCP-201ENST00000358901 LRRC29Q8WV35 223 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 CTHRC1Q96CG8 243 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 OR2H1Q9GZK4 316 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 OR5AC2Q9NZP5 309 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 NRXN2Q9P2S2 1712 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 IGLV1-36A0A0B4J1U3 117 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 TSPAN2O60636 221 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 SMIM10L1P0DMW3 83 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 PMCHP20382 165 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 RPL11P62913 178 aaKnown RBP12.02□□□□□ -0.49
VCP-201ENST00000358901 HIST1H3AP68431 136 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 PLPPR5Q32ZL2 321 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 ZNF260Q3ZCT1 412 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 COL13A1Q5TAT6 717 aaPredicted RBP12.02□□□□□ -0.49
VCP-201ENST00000358901 LINC01590Q5TEZ4 76 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 UNQ9370/PRO34162Q6UXP9 181 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 MRGPRFQ96AM1 343 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 TIMD4Q96H15 378 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 SMIM10Q96HG1 83 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 NAT8BQ9UHF3 227 aa12.02□□□□□ -0.49
VCP-201ENST00000358901 MFNGO00587 321 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 THY1P04216 161 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 MDH2P40926 338 aaKnown RBP12.01□□□□□ -0.49
VCP-201ENST00000358901 TMEM211Q6ICI0 200 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 NUFIP2Q7Z417 695 aaKnown RBP12.01□□□□□ -0.49
VCP-201ENST00000358901 ZNF501Q96CX3 271 aaPredicted RBP12.01□□□□□ -0.49
VCP-201ENST00000358901 FBXO17Q96EF6 278 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 NEIL1Q96FI4 390 aaPredicted RBP12.01□□□□□ -0.49
VCP-201ENST00000358901 NRIP2Q9BQI9 281 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 SCN10AQ9Y5Y9 1956 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 ZNF831Q5JPB2 1677 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 IGHV5-10-1A0A0J9YXX1 117 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 DBX1A6NMT0 343 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 CYC1P08574 325 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 SEC11BP0C7V7 166 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 BCL3P20749 454 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 ERVS71-1P61550 626 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 ZNF273Q14593 569 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 FAM181AQ8N9Y4 354 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 ATP5SQ99766 215 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 PARP11Q9NR21 331 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 TMEM38BQ9NVV0 291 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 A0A0J9YW62 118 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 RPS4Y1P22090 263 aaKnown RBP12.01□□□□□ -0.49
VCP-201ENST00000358901 ATP6V0CP27449 155 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 TPPP2P59282 170 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 NHLH2Q02577 135 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 IGFBP7Q16270 282 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 VAX1Q5SQQ9 334 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 PUSL1Q8N0Z8 303 aaKnown RBP12.01□□□□□ -0.49
VCP-201ENST00000358901 SMRP1Q8NCR6 262 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 M1APQ8TC57 530 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 TMEM147Q9BVK8 224 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 GPR35Q9HC97 309 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 ARL2-SNX15V9GYD0 113 aa12.01□□□□□ -0.49
VCP-201ENST00000358901 MKRN2OSH3BPM6 223 aa12□□□□□ -0.49
VCP-201ENST00000358901 LIFP15018 202 aa12□□□□□ -0.49
VCP-201ENST00000358901 NAAAQ02083 359 aa12□□□□□ -0.49
VCP-201ENST00000358901 PNRC1Q12796 327 aaPredicted RBP12□□□□□ -0.49
VCP-201ENST00000358901 PMS2P11Q13670 270 aa12□□□□□ -0.49
VCP-201ENST00000358901 C9orf152Q5JTZ5 239 aa12□□□□□ -0.49
VCP-201ENST00000358901 BTNL3Q6UXE8 466 aa12□□□□□ -0.49
VCP-201ENST00000358901 RCC2Q9P258 522 aaKnown RBP12□□□□□ -0.49
VCP-201ENST00000358901 TINAGQ9UJW2 476 aa12□□□□□ -0.49
VCP-201ENST00000358901 R4GN57 208 aa12□□□□□ -0.49
VCP-201ENST00000358901 SBF2Q86WG5 1849 aa12□□□□□ -0.49
VCP-201ENST00000358901 IGKV1D-42A0A075B6H8 117 aa12□□□□□ -0.49
VCP-201ENST00000358901 TRBV5-7A0A0A0MS05 114 aa12□□□□□ -0.49
VCP-201ENST00000358901 ZNF98A6NK75 572 aa12□□□□□ -0.49
VCP-201ENST00000358901 C1QL1O75973 258 aa12□□□□□ -0.49
VCP-201ENST00000358901 HLA-GP17693 338 aa12□□□□□ -0.49
VCP-201ENST00000358901 DLK1P80370 383 aa12□□□□□ -0.49
VCP-201ENST00000358901 ZP4Q12836 540 aa12□□□□□ -0.49
VCP-201ENST00000358901 IQCJQ1A5X6 159 aa12□□□□□ -0.49
VCP-201ENST00000358901 FHL5Q5TD97 284 aa12□□□□□ -0.49
VCP-201ENST00000358901 SSX7Q7RTT5 188 aa12□□□□□ -0.49
VCP-201ENST00000358901 OR10AD1Q8NGE0 317 aa12□□□□□ -0.49
VCP-201ENST00000358901 GNB4Q9HAV0 340 aa12□□□□□ -0.49
VCP-201ENST00000358901 KIAA1456Q9P272 454 aa12□□□□□ -0.49
VCP-201ENST00000358901 ABCA7Q8IZY2 2146 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms