RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 TOMM34Q15785 309 aaPredicted RBP9.02□□□□□ -0.96
CLIP1-202ENST00000358808 REC114Q7Z4M0 266 aa9.02□□□□□ -0.96
CLIP1-202ENST00000358808 SPICQ8N5J4 248 aa9.02□□□□□ -0.96
CLIP1-202ENST00000358808 OR10D4PQ8NGN7 298 aa9.02□□□□□ -0.96
CLIP1-202ENST00000358808 SNX22Q96L94 193 aa9.02□□□□□ -0.96
CLIP1-202ENST00000358808 TBX15Q96SF7 602 aa9.02□□□□□ -0.96
CLIP1-202ENST00000358808 VN1R1Q9GZP7 353 aa9.02□□□□□ -0.96
CLIP1-202ENST00000358808 LPAR5Q9H1C0 372 aa9.02□□□□□ -0.96
CLIP1-202ENST00000358808 SPTY2D1-AS1A0A0U1RR47 76 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 MED19A0JLT2 244 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-202ENST00000358808 RGS13O14921 159 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 COX6CP09669 75 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 ZNF385DQ9H6B1 395 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 A6NDN8 102 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 OOEPA6NGQ2 149 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 RER1O15258 196 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 AVPR2P30518 371 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 SSBP1Q04837 148 aaKnown RBP9.02□□□□□ -0.97
CLIP1-202ENST00000358808 ZBTB37Q5TC79 503 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 SPNS2Q8IVW8 549 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 C16orf92Q96LL3 132 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 GABARAPL3Q9BY60 117 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 TUBA4BQ9H853 241 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 GLRX2Q9NS18 164 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 WSB1Q9Y6I7 421 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 SMAD7O15105 426 aaKnown RBP9.02□□□□□ -0.97
CLIP1-202ENST00000358808 FABP5Q01469 135 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 FMODQ06828 376 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 ZNF658BQ4V348 819 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-202ENST00000358808 OR2W3Q7Z3T1 314 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 C6orf201Q7Z4U5 140 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 NT5CQ8TCD5 201 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 DYRK2Q92630 601 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 PLA2G2FQ9BZM2 168 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 CA10Q9NS85 328 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 HSPB8Q9UJY1 196 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 IGHV3OR15-7A0A075B7D8 119 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 HLA-DRB5Q30154 266 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 CCDC144NLQ6NUI1 221 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 PET117Q6UWS5 81 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 Q6ZNB5 142 aa9.02□□□□□ -0.97
CLIP1-202ENST00000358808 PRSS12P56730 875 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 GBGT1Q8N5D6 347 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 OTOSQ8NHW6 89 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 DUX5Q96PT3 197 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 C12orf57Q99622 126 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 DNAJC13O75165 2243 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 TMEM218A2RU14 115 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 GPX5O75715 221 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 HAND1O96004 215 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 CEACAM5P06731 702 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 ZNF137PP52743 207 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 SUCLG1P53597 346 aaKnown RBP9.01□□□□□ -0.97
CLIP1-202ENST00000358808 YBX1P67809 324 aaKnown RBP9.01□□□□□ -0.97
CLIP1-202ENST00000358808 ZNF117Q03924 483 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 DLEU7Q6UYE1 221 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 PRNTQ86SH4 94 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 ZNF738Q8NE65 137 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 SLC25A19Q9HC21 320 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 KCNE3Q9Y6H6 103 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 CLDN34H7C241 214 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 SMPD2O60906 423 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 PATE4P0C8F1 98 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 C11orf87Q6NUJ2 197 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 ARRDC1Q8N5I2 433 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 RHNO1Q9BSD3 238 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 MRPL13Q9BYD1 178 aaKnown RBP9.01□□□□□ -0.97
CLIP1-202ENST00000358808 PRO1933Q9H354 126 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 MRPS16Q9Y3D3 137 aaKnown RBP9.01□□□□□ -0.97
CLIP1-202ENST00000358808 DUXBA0A1W2PPF3 345 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 EDIL3O43854 480 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 EPPINO95925 133 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 MEIG1Q5JSS6 88 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 SLC25A42Q86VD7 318 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 OIT3Q8WWZ8 545 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 TEX101Q9BY14 249 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 FSCN3Q9NQT6 498 aa9.01□□□□□ -0.97
CLIP1-202ENST00000358808 FER1L6Q2WGJ9 1857 aa9□□□□□ -0.97
CLIP1-202ENST00000358808 HIST1H1BP16401 226 aaKnown RBP9□□□□□ -0.97
CLIP1-202ENST00000358808 BTF3P20290 206 aaKnown RBP9□□□□□ -0.97
CLIP1-202ENST00000358808 MAS1LP35410 378 aa9□□□□□ -0.97
CLIP1-202ENST00000358808 METAP1P53582 386 aa9□□□□□ -0.97
CLIP1-202ENST00000358808 KLRB1Q12918 225 aa9□□□□□ -0.97
CLIP1-202ENST00000358808 SLC25A35Q3KQZ1 300 aa9□□□□□ -0.97
CLIP1-202ENST00000358808 LAMTOR1Q6IAA8 161 aa9□□□□□ -0.97
CLIP1-202ENST00000358808 SSMEM1Q8WWF3 244 aa9□□□□□ -0.97
CLIP1-202ENST00000358808 HARBI1Q96MB7 349 aa9□□□□□ -0.97
CLIP1-202ENST00000358808 DCTN5Q9BTE1 182 aa9□□□□□ -0.97
CLIP1-202ENST00000358808 MS4A5Q9H3V2 200 aa9□□□□□ -0.97
CLIP1-202ENST00000358808 KLK11Q9UBX7 282 aa9□□□□□ -0.97
CLIP1-202ENST00000358808 TPRP12270 2363 aaKnown RBP9□□□□□ -0.97
CLIP1-202ENST00000358808 HIST1H1DP16402 221 aaKnown RBP9□□□□□ -0.97
CLIP1-202ENST00000358808 LRRC75BQ2VPJ9 315 aa9□□□□□ -0.97
CLIP1-202ENST00000358808 SIGIRRQ6IA17 410 aa9□□□□□ -0.97
CLIP1-202ENST00000358808 PHYHIPLQ96FC7 376 aa9□□□□□ -0.97
CLIP1-202ENST00000358808 SCN9AQ15858 1988 aa9□□□□□ -0.97
CLIP1-202ENST00000358808 TMEM272A0A1B0GTI8 110 aa9□□□□□ -0.97
CLIP1-202ENST00000358808 IGLV3-27P01718 113 aa9□□□□□ -0.97
CLIP1-202ENST00000358808 CSF2RBP32927 897 aa9□□□□□ -0.97
CLIP1-202ENST00000358808 KHDC3LQ587J8 217 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms