RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 SHANK1Q9Y566 2161 aa10.46□□□□□ -0.74
SMARCAL1-201ENST00000357276 IGLV3-32A0A0A0MS00 114 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 CASP6P55212 293 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 RAB11AP62491 216 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 WDR25Q64LD2 544 aaPredicted RBP10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 CPEB2Q7Z5Q1 589 aaKnown RBP10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 DYRK2Q92630 601 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 OXGR1Q96P68 337 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 AGMATQ9BSE5 352 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 FAM221AA4D161 298 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 PPYP01298 95 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 ATXN8OSP0DMR3 200 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 CTHP32929 405 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 DAZAP2Q15038 168 aaPredicted RBP10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 ZNF880Q6PDB4 577 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 TMEM92Q6UXU6 159 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 MEX3BQ6ZN04 569 aaKnown RBP10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 C16orf47Q6ZP98 133 aaPredicted RBP10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 ZNF295-AS1Q8N0V1 137 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 ACY3Q96HD9 319 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 SNHG12Q9BXW3 62 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 ZNF286AQ9HBT8 521 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 DFFBO76075 338 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 CST7O76096 145 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 UCP1P25874 307 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 ZNF726P1Q15940 193 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 C10orf128Q5T292 105 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 CARD17Q5XLA6 110 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 LANCL3Q6ZV70 420 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 IL22RA1Q8N6P7 574 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 OR2V1Q8NHB1 315 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 NABP1Q96AH0 204 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 IL36GQ9NZH8 169 aa10.45□□□□□ -0.74
SMARCAL1-201ENST00000357276 ANGPTL7O43827 346 aa10.44□□□□□ -0.74
SMARCAL1-201ENST00000357276 PIAS2O75928 621 aa10.44□□□□□ -0.74
SMARCAL1-201ENST00000357276 USF2Q15853 346 aaPredicted RBP10.44□□□□□ -0.74
SMARCAL1-201ENST00000357276 Q6ZS49 121 aa10.44□□□□□ -0.74
SMARCAL1-201ENST00000357276 SUMF1Q8NBK3 374 aa10.44□□□□□ -0.74
SMARCAL1-201ENST00000357276 GJC3Q8NFK1 279 aa10.44□□□□□ -0.74
SMARCAL1-201ENST00000357276 HIST1H2AAQ96QV6 131 aa10.44□□□□□ -0.74
SMARCAL1-201ENST00000357276 REPIN1Q9BWE0 567 aaKnown RBP10.44□□□□□ -0.74
SMARCAL1-201ENST00000357276 GNG13Q9P2W3 67 aa10.44□□□□□ -0.74
SMARCAL1-201ENST00000357276 CD55P08174 381 aa10.44□□□□□ -0.74
SMARCAL1-201ENST00000357276 THEGLP0DJG4 465 aa10.44□□□□□ -0.74
SMARCAL1-201ENST00000357276 ZNF154Q13106 437 aa10.44□□□□□ -0.74
SMARCAL1-201ENST00000357276 TMEM211Q6ICI0 200 aa10.44□□□□□ -0.74
SMARCAL1-201ENST00000357276 P4HA3Q7Z4N8 544 aa10.44□□□□□ -0.74
SMARCAL1-201ENST00000357276 R3HDM4Q96D70 268 aa10.44□□□□□ -0.74
SMARCAL1-201ENST00000357276 MAGT1Q9H0U3 335 aa10.44□□□□□ -0.74
SMARCAL1-201ENST00000357276 IGKV1-12A0A0C4DH73 117 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 ADAM20O43506 726 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 SPRY1O43609 319 aaPredicted RBP10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 IGKV1D-12P01611 117 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 PTGDSP41222 190 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 TBC1D26Q86UD7 250 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 TMEM123Q8N131 208 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 OR51G1Q8NGK1 321 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 POM121Q96HA1 1249 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 RPRMQ9NS64 109 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 GPR173Q9NS66 373 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 F5H5K5 113 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 CYTIPO60759 359 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 MSR1P21757 451 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 VAMP2P63027 116 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 MPV17LQ2QL34 196 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 C17orf82Q86X59 251 aaPredicted RBP10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 C20orf196Q8IYI0 205 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 TMEM170AQ8WVE7 144 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 ZNF665Q9H7R5 613 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 SZT2Q5T011 3432 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 AQP7P3A6NL99 342 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 KIAA1324LA8MWY0 1029 aaPredicted RBP10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 GZMHP20718 246 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 MDKP21741 143 aaPredicted RBP10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 VDAC1P21796 283 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 MSX1P28360 303 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 HERV-K104P61576 105 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 SNAI3Q3KNW1 292 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 TMEM42Q69YG0 159 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 SSX7Q7RTT5 188 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 TMEM217Q8N7C4 229 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 TAAR3PQ9P1P4 343 aa10.43□□□□□ -0.74
SMARCAL1-201ENST00000357276 XKRY2A2RUG3 117 aa10.42□□□□□ -0.74
SMARCAL1-201ENST00000357276 CHST1O43916 411 aa10.42□□□□□ -0.74
SMARCAL1-201ENST00000357276 GABRG2P18507 467 aa10.42□□□□□ -0.74
SMARCAL1-201ENST00000357276 RAB4AP20338 218 aa10.42□□□□□ -0.74
SMARCAL1-201ENST00000357276 FBLP22087 321 aaKnown RBP10.42□□□□□ -0.74
SMARCAL1-201ENST00000357276 CCR5P51681 352 aa10.42□□□□□ -0.74
SMARCAL1-201ENST00000357276 CLN3Q13286 438 aa10.42□□□□□ -0.74
SMARCAL1-201ENST00000357276 P2RY6Q15077 328 aa10.42□□□□□ -0.74
SMARCAL1-201ENST00000357276 PIGYQ3MUY2 71 aa10.42□□□□□ -0.74
SMARCAL1-201ENST00000357276 ZNF695Q8IW36 515 aa10.42□□□□□ -0.74
SMARCAL1-201ENST00000357276 NFAM1Q8NET5 270 aaPredicted RBP10.42□□□□□ -0.74
SMARCAL1-201ENST00000357276 TMEM54Q969K7 222 aa10.42□□□□□ -0.74
SMARCAL1-201ENST00000357276 PSMG3Q9BT73 122 aaPredicted RBP10.42□□□□□ -0.74
SMARCAL1-201ENST00000357276 KIR2DL5BA0A0G2JN68 375 aa10.42□□□□□ -0.74
SMARCAL1-201ENST00000357276 KIR2DL5BA0A0G2JPC4 375 aa10.42□□□□□ -0.74
SMARCAL1-201ENST00000357276 C2CD4DB7Z1M9 353 aa10.42□□□□□ -0.74
SMARCAL1-201ENST00000357276 BLKP51451 505 aa10.42□□□□□ -0.74
SMARCAL1-201ENST00000357276 NUBP1P53384 320 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms