RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 A0A1W2PNV4 684 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 ZNF320A2RRD8 509 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 PDGFBP01127 241 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-201ENST00000352993 IFI6P09912 130 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 TNFSF10P50591 281 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 CNN1P51911 297 aaKnown RBP6.63□□□□□ -1.35
BRCA1-201ENST00000352993 TAS2R30P59541 319 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 KIAA2026Q5HYC2 2103 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 C1orf194Q5T5A4 169 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 OR2T10Q8NGZ9 312 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 LHX4Q969G2 390 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 ZNF845Q96IR2 970 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-201ENST00000352993 VSIRQ9H7M9 311 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 CERS4Q9HA82 394 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 LYRM2Q9NU23 88 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-201ENST00000352993 SLC39A9Q9NUM3 307 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 COPS7AQ9UBW8 275 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 PRR19A6NJB7 356 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 MPPED1O15442 326 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 ZNF737O75373 536 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 GZMHP20718 246 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 CD82P27701 267 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 HIST1H3AP68431 136 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 RUNX3Q13761 415 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 ENDOGQ14249 297 aaKnown RBP6.63□□□□□ -1.35
BRCA1-201ENST00000352993 NSDHLQ15738 373 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 GAB4Q2WGN9 574 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 ACOT6Q3I5F7 207 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-201ENST00000352993 SHISA6Q6ZSJ9 500 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 OR4D5Q8NGN0 318 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 ATP5SQ99766 215 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 TMEM106CQ9BVX2 250 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 RBKSQ9H477 322 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 Q9N2K0 584 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 DNAJC4Q9NNZ3 241 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 TMEM242Q9NWH2 141 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 KLHL13Q9P2N7 655 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 TRAPPC1Q9Y5R8 145 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 MTCH2Q9Y6C9 303 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 MKI67P46013 3256 aaKnown RBP6.62□□□□□ -1.35
BRCA1-201ENST00000352993 FRG2CA6NGY1 282 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 ZNF732B4DXR9 585 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 TRDCB7Z8K6 153 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 AQP7O14520 342 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 PLRG1O43660 514 aaKnown RBP6.62□□□□□ -1.35
BRCA1-201ENST00000352993 CA11O75493 328 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 CELA2BP08218 269 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-201ENST00000352993 DCAF7P61962 342 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 SMAD4Q13485 552 aaKnown RBP6.62□□□□□ -1.35
BRCA1-201ENST00000352993 H1FOOQ8IZA3 346 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-201ENST00000352993 NOXO1Q8NFA2 376 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 OR4F5Q8NH21 305 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-201ENST00000352993 OR4F4Q96R69 305 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 LPAR2Q9HBW0 351 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 MSL2Q9HCI7 577 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 CISD1Q9NZ45 108 aaKnown RBP6.62□□□□□ -1.35
BRCA1-201ENST00000352993 DIDO1Q9BTC0 2240 aaKnown RBP6.62□□□□□ -1.35
BRCA1-201ENST00000352993 KMT2EQ8IZD2 1858 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 MAP1LC3B2A6NCE7 125 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 LRRC3CA6NJW4 275 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 VSTM2BA6NLU5 285 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 ALG1L2C9J202 215 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 TP53I11O14683 189 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 CDS2O95674 445 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 IGHG1P01857 330 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 IAPPP10997 89 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 GALNSP34059 522 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 FAM78BQ5VT40 261 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 TBC1D26Q86UD7 250 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 ZNF573Q86YE8 665 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 CALHM1Q8IU99 346 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 TMEM256Q8N2U0 113 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 MAP1LC3BQ9GZQ8 125 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 SERINC1Q9NRX5 453 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 RRP8O43159 456 aaKnown RBP6.62□□□□□ -1.35
BRCA1-201ENST00000352993 OR7C1O76099 320 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-201ENST00000352993 LCATP04180 440 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 LINC00614P0C842 121 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 ZNF17P17021 662 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 PTTG1IPP53801 180 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 UCP3P55916 312 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 DLX2Q07687 328 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-201ENST00000352993 PIGYQ3MUY2 71 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 KCNIP4Q6PIL6 250 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 VN1R17PQ8TDU5 208 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 TMEM170AQ8WVE7 144 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 DDIT4LQ96D03 193 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 OR2J1Q9GZK6 312 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 ASCL3Q9NQ33 180 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 FOXJ2Q9P0K8 574 aa6.62□□□□□ -1.35
BRCA1-201ENST00000352993 A0A1W2PNR3 127 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 B4E171 279 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 TOX3O15405 576 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-201ENST00000352993 NPIPB7O75200 414 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 TSPAN7P41732 249 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 RAB35Q15286 201 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 IZUMO4Q1ZYL8 232 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 THEM4Q5T1C6 240 aa6.61□□□□□ -1.35
BRCA1-201ENST00000352993 DPPA3Q6W0C5 159 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms