RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 MEF2BQ02080 365 aaPredicted RBP16.06■□□□□ 0.16
SMPD1-201ENST00000342245 KISS1Q15726 138 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 CPEB2Q7Z5Q1 589 aaKnown RBP16.06■□□□□ 0.16
SMPD1-201ENST00000342245 TMEM56Q96MV1 263 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 REPIN1Q9BWE0 567 aaKnown RBP16.06■□□□□ 0.16
SMPD1-201ENST00000342245 TMEM56-RWDD3S4R434 201 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 OR6C6A6NF89 314 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 LILRA1O75019 489 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 LILRB3O75022 631 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 C8AP07357 584 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 CD99P14209 185 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 NPBWR2P48146 333 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 RPS20P60866 119 aaKnown RBP16.06■□□□□ 0.16
SMPD1-201ENST00000342245 MORN2Q502X0 79 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 CST9LP1Q5W188 147 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 LCN15Q6UWW0 184 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 ASB10Q8WXI3 467 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 LIME1Q9H400 295 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 ZNF319Q9P2F9 582 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 NPIPB7O75200 414 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 ZNF737O75373 536 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 OPN1LWP04000 364 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 PGCP20142 388 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 UCP1P25874 307 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 CARD18P57730 90 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 ID3Q02535 119 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 TSPO2Q5TGU0 170 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 TMEM256Q8N2U0 113 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 OR1L6Q8NGR2 347 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 TMEM222Q9H0R3 208 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 MANBALQ9NQG1 85 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 HSPB7Q9UBY9 170 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 LOC105371242A0A075B767 164 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 C3orf85A0A1B0GTC6 90 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 NPIPA5E9PKD4 350 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 ADH5P11766 374 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 MRPS34P82930 218 aaKnown RBP16.05■□□□□ 0.16
SMPD1-201ENST00000342245 ZP4Q12836 540 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 RNF151Q2KHN1 245 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 ZNF695Q8IW36 515 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 TMEM217Q8N7C4 229 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 OR14C36Q8NHC7 312 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 NPIPA1Q9UND3 350 aa16.05■□□□□ 0.16
SMPD1-201ENST00000342245 LRRC3CA6NJW4 275 aa16.04■□□□□ 0.16
SMPD1-201ENST00000342245 FXYD4P59646 89 aa16.04■□□□□ 0.16
SMPD1-201ENST00000342245 MEX3BQ6ZN04 569 aaKnown RBP16.04■□□□□ 0.16
SMPD1-201ENST00000342245 Q6ZWC4 215 aa16.04■□□□□ 0.16
SMPD1-201ENST00000342245 C6orf201Q7Z4U5 140 aa16.04■□□□□ 0.16
SMPD1-201ENST00000342245 D2HGDHQ8N465 521 aa16.04■□□□□ 0.16
SMPD1-201ENST00000342245 STPG4Q8N801 248 aa16.04■□□□□ 0.16
SMPD1-201ENST00000342245 ZNF524Q96C55 264 aa16.04■□□□□ 0.16
SMPD1-201ENST00000342245 KCNK17Q96T54 332 aa16.04■□□□□ 0.16
SMPD1-201ENST00000342245 VDAC3Q9Y277 283 aa16.04■□□□□ 0.16
SMPD1-201ENST00000342245 F6UZH7 168 aa16.04■□□□□ 0.16
SMPD1-201ENST00000342245 PIAS2O75928 621 aa16.04■□□□□ 0.16
SMPD1-201ENST00000342245 PDGFBP01127 241 aaPredicted RBP16.04■□□□□ 0.16
SMPD1-201ENST00000342245 ZNF154Q13106 437 aa16.04■□□□□ 0.16
SMPD1-201ENST00000342245 TDRG1Q3Y452 100 aa16.04■□□□□ 0.16
SMPD1-201ENST00000342245 ODF3L1Q8IXM7 274 aa16.04■□□□□ 0.16
SMPD1-201ENST00000342245 SHISA5Q8N114 240 aa16.04■□□□□ 0.16
SMPD1-201ENST00000342245 OR5T1Q8NG75 326 aa16.04■□□□□ 0.16
SMPD1-201ENST00000342245 ZNF296Q8WUU4 475 aaPredicted RBP16.04■□□□□ 0.16
SMPD1-201ENST00000342245 C11orf40Q8WZ69 217 aa16.04■□□□□ 0.16
SMPD1-201ENST00000342245 LANCL2Q9NS86 450 aa16.04■□□□□ 0.16
SMPD1-201ENST00000342245 ZNF581Q9P0T4 197 aa16.04■□□□□ 0.16
SMPD1-201ENST00000342245 INSL6Q9Y581 213 aa16.04■□□□□ 0.16
SMPD1-201ENST00000342245 FREM3P0C091 2139 aa16.04■□□□□ 0.16
SMPD1-201ENST00000342245 PRRC2BQ5JSZ5 2229 aaKnown RBP16.03■□□□□ 0.16
SMPD1-201ENST00000342245 PIGBOS1A0A0B4J2F0 54 aa16.03■□□□□ 0.16
SMPD1-201ENST00000342245 A0A0U1RQV5 110 aa16.03■□□□□ 0.16
SMPD1-201ENST00000342245 MPPED1O15442 326 aa16.03■□□□□ 0.16
SMPD1-201ENST00000342245 AADACP22760 399 aa16.03■□□□□ 0.16
SMPD1-201ENST00000342245 MPLP40238 635 aa16.03■□□□□ 0.16
SMPD1-201ENST00000342245 PSMB3P49720 205 aa16.03■□□□□ 0.16
SMPD1-201ENST00000342245 HERV-K104P61576 105 aa16.03■□□□□ 0.16
SMPD1-201ENST00000342245 MMDQ15546 238 aa16.03■□□□□ 0.16
SMPD1-201ENST00000342245 ADAMTS18Q8TE60 1221 aa16.03■□□□□ 0.16
SMPD1-201ENST00000342245 ZNF286AQ9HBT8 521 aa16.03■□□□□ 0.16
SMPD1-201ENST00000342245 COX11Q9Y6N1 276 aa16.03■□□□□ 0.16
SMPD1-201ENST00000342245 AQP7O14520 342 aa16.03■□□□□ 0.16
SMPD1-201ENST00000342245 JMJD7P0C870 316 aa16.03■□□□□ 0.16
SMPD1-201ENST00000342245 BMP5P22003 454 aa16.03■□□□□ 0.16
SMPD1-201ENST00000342245 IL3RAP26951 378 aa16.03■□□□□ 0.16
SMPD1-201ENST00000342245 MDH2P40926 338 aaKnown RBP16.03■□□□□ 0.16
SMPD1-201ENST00000342245 MAJINQ3KP22 176 aa16.03■□□□□ 0.16
SMPD1-201ENST00000342245 OR8B12Q8NGG6 310 aa16.03■□□□□ 0.16
SMPD1-201ENST00000342245 FAM3CQ92520 227 aa16.03■□□□□ 0.16
SMPD1-201ENST00000342245 CYYR1Q96J86 154 aa16.03■□□□□ 0.16
SMPD1-201ENST00000342245 LAMTOR2Q9Y2Q5 125 aa16.03■□□□□ 0.16
SMPD1-201ENST00000342245 TMED7-TICAM2A0A0A6YYA0 188 aa16.02■□□□□ 0.16
SMPD1-201ENST00000342245 IGHV2-70DA0A0C4DH43 119 aa16.02■□□□□ 0.16
SMPD1-201ENST00000342245 IGKV1-9A0A0C4DH69 117 aa16.02■□□□□ 0.16
SMPD1-201ENST00000342245 PPP1CBP62140 327 aa16.02■□□□□ 0.16
SMPD1-201ENST00000342245 FMODQ06828 376 aa16.02■□□□□ 0.16
SMPD1-201ENST00000342245 PRSS8Q16651 343 aa16.02■□□□□ 0.16
SMPD1-201ENST00000342245 SUMF1Q8NBK3 374 aa16.02■□□□□ 0.16
SMPD1-201ENST00000342245 OR5AU1Q8NGC0 362 aa16.02■□□□□ 0.16
SMPD1-201ENST00000342245 OR56B2PQ8NGI1 322 aa16.02■□□□□ 0.16
SMPD1-201ENST00000342245 BAHD1Q8TBE0 780 aaPredicted RBP16.02■□□□□ 0.16
SMPD1-201ENST00000342245 FAM71F1Q96KD3 344 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms