RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 RFESDQ8TAC1 157 aa12.98□□□□□ -0.33
RRP1B-201ENST00000340648 CA5BP1Q8WTZ4 195 aa12.98□□□□□ -0.33
RRP1B-201ENST00000340648 NEIL1Q96FI4 390 aaPredicted RBP12.98□□□□□ -0.33
RRP1B-201ENST00000340648 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.98□□□□□ -0.33
RRP1B-201ENST00000340648 KIAA1456Q9P272 454 aa12.98□□□□□ -0.33
RRP1B-201ENST00000340648 GATCO43716 136 aaKnown RBP12.98□□□□□ -0.33
RRP1B-201ENST00000340648 CDC34P49427 236 aaPredicted RBP12.98□□□□□ -0.33
RRP1B-201ENST00000340648 SLC10A1Q14973 349 aa12.98□□□□□ -0.33
RRP1B-201ENST00000340648 PTCRAQ6ISU1 281 aaPredicted RBP12.98□□□□□ -0.33
RRP1B-201ENST00000340648 C10orf35Q96D05 121 aa12.98□□□□□ -0.33
RRP1B-201ENST00000340648 RARRES2Q99969 163 aa12.98□□□□□ -0.33
RRP1B-201ENST00000340648 SH3BGRL3Q9H299 93 aa12.98□□□□□ -0.33
RRP1B-201ENST00000340648 MSL2Q9HCI7 577 aa12.98□□□□□ -0.33
RRP1B-201ENST00000340648 SSUH2Q9Y2M2 353 aa12.98□□□□□ -0.33
RRP1B-201ENST00000340648 OTOFQ9HC10 1997 aa12.98□□□□□ -0.33
RRP1B-201ENST00000340648 DEFB108AA8MXU0 73 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 H0YL77 283 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 TCAPO15273 167 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 FABP6P51161 128 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 HFEQ30201 348 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 PRR27Q6MZM9 219 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 ZNF385AQ96PM9 386 aaKnown RBP12.97□□□□□ -0.33
RRP1B-201ENST00000340648 S1PR3Q99500 378 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 PHF7Q9BWX1 381 aaPredicted RBP12.97□□□□□ -0.33
RRP1B-201ENST00000340648 CBY1Q9Y3M2 126 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 TMEM30CPA0ZSE6 113 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 P4HTMQ9NXG6 502 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 TAAR3PQ9P1P4 343 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 CACFD1Q9UGQ2 172 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 DUXBA0A1W2PPF3 345 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 PITX3O75364 302 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 HEXAP06865 529 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 TAS2R45P59539 299 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 RANP62826 216 aaKnown RBP12.97□□□□□ -0.33
RRP1B-201ENST00000340648 SLC35E1Q96K37 410 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 RHOVQ96L33 236 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 TWSG1Q9GZX9 223 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 DICER1Q9UPY3 1922 aaKnown RBP12.97□□□□□ -0.33
RRP1B-201ENST00000340648 PQLC2LA1A4F0 135 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 PRR32B1ATL7 298 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 MS4A18H0YCH9 400 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 MMP9P14780 707 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 MS4A18Q3C1V0 323 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 ARTNQ5T4W7 220 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 DEFB108BQ8NET1 73 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 OR1K1Q8NGR3 316 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 SLC25A28Q96A46 364 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 GFI1Q99684 422 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 OR2D2Q9H210 308 aa12.97□□□□□ -0.33
RRP1B-201ENST00000340648 NXPH1P58417 271 aa12.96□□□□□ -0.33
RRP1B-201ENST00000340648 TEX30Q5JUR7 227 aa12.96□□□□□ -0.33
RRP1B-201ENST00000340648 LRP11Q86VZ4 500 aa12.96□□□□□ -0.33
RRP1B-201ENST00000340648 MRGPRFQ96AM1 343 aa12.96□□□□□ -0.33
RRP1B-201ENST00000340648 PITPNC1Q9UKF7 332 aa12.96□□□□□ -0.33
RRP1B-201ENST00000340648 CARHSP1Q9Y2V2 147 aaKnown RBP12.96□□□□□ -0.33
RRP1B-201ENST00000340648 TRAV39A0A0B4J263 110 aa12.96□□□□□ -0.33
RRP1B-201ENST00000340648 KIAA1324LA8MWY0 1029 aaPredicted RBP12.96□□□□□ -0.33
RRP1B-201ENST00000340648 IGHV4-34P06331 123 aa12.96□□□□□ -0.33
RRP1B-201ENST00000340648 TMEM211Q6ICI0 200 aa12.96□□□□□ -0.33
RRP1B-201ENST00000340648 D2HGDHQ8N465 521 aa12.96□□□□□ -0.33
RRP1B-201ENST00000340648 POC1AQ8NBT0 407 aa12.96□□□□□ -0.33
RRP1B-201ENST00000340648 CORO2AQ92828 525 aa12.96□□□□□ -0.33
RRP1B-201ENST00000340648 FER1L6-AS2Q96M78 137 aa12.96□□□□□ -0.33
RRP1B-201ENST00000340648 IP6K3Q96PC2 410 aa12.96□□□□□ -0.33
RRP1B-201ENST00000340648 UNC119Q13432 240 aa12.96□□□□□ -0.33
RRP1B-201ENST00000340648 MOB1BQ7L9L4 216 aa12.96□□□□□ -0.33
RRP1B-201ENST00000340648 NUFIP2Q7Z417 695 aaKnown RBP12.96□□□□□ -0.33
RRP1B-201ENST00000340648 TMEM252Q8N6L7 170 aa12.96□□□□□ -0.33
RRP1B-201ENST00000340648 LHFPL6Q9Y693 200 aa12.96□□□□□ -0.33
RRP1B-201ENST00000340648 TNS1Q9HBL0 1735 aaKnown RBP12.96□□□□□ -0.34
RRP1B-201ENST00000340648 SCGB2A1O75556 95 aa12.96□□□□□ -0.34
RRP1B-201ENST00000340648 KHDC3LQ587J8 217 aa12.96□□□□□ -0.34
RRP1B-201ENST00000340648 EIF4E3Q8N5X7 224 aaKnown RBP12.96□□□□□ -0.34
RRP1B-201ENST00000340648 TMEM178AQ8NBL3 297 aa12.96□□□□□ -0.34
RRP1B-201ENST00000340648 OR2M3Q8NG83 312 aa12.96□□□□□ -0.34
RRP1B-201ENST00000340648 H1FXQ92522 213 aaKnown RBP12.96□□□□□ -0.34
RRP1B-201ENST00000340648 TMEM147Q9BVK8 224 aa12.96□□□□□ -0.34
RRP1B-201ENST00000340648 NAT8BQ9UHF3 227 aa12.96□□□□□ -0.34
RRP1B-201ENST00000340648 LOC285556D6RIA3 1793 aa12.96□□□□□ -0.34
RRP1B-201ENST00000340648 HNRNPA3P51991 378 aaKnown RBP12.95□□□□□ -0.34
RRP1B-201ENST00000340648 LY6G6FQ5SQ64 297 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 TRAV34A0A0B4J273 112 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 CRYM-AS1A6NIL9 109 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 M0R143 59 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 FCN1O00602 326 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 HLA-GP17693 338 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 PLPPR5Q32ZL2 321 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 ETV3LQ6ZN32 361 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 SSX7Q7RTT5 188 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 KDF1Q8NAX2 398 aaPredicted RBP12.95□□□□□ -0.34
RRP1B-201ENST00000340648 OR52M1Q8NGK5 317 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 EDARADDQ8WWZ3 215 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 AURKAIP1Q9NWT8 199 aaPredicted RBP12.95□□□□□ -0.34
RRP1B-201ENST00000340648 SH3BGRL2Q9UJC5 107 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 TGIF2-C20orf24A0A0A6YYL0 155 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 TMEM14DPA8MWL7 114 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 M0R1X1 148 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 TRAF3IP2O43734 574 aaPredicted RBP12.95□□□□□ -0.34
RRP1B-201ENST00000340648 IFI6P09912 130 aa12.95□□□□□ -0.34
RRP1B-201ENST00000340648 OR5G3P0C626 314 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms