RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 DNTTIP1Q9H147 329 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 C1orf123Q9NWV4 160 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 SLC2A8Q9NY64 477 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 OR1A1Q9P1Q5 309 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 PFDN2Q9UHV9 154 aa8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 ERRFI1Q9UJM3 462 aaPredicted RBP8.68□□□□□ -1.02
RBFOX1-202ENST00000340209 PPYP01298 95 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 OR8U9P0C7N5 309 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 TOR2AQ5JU69 321 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 GFRALQ6UXV0 394 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 ZNF695Q8IW36 515 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 GAPTQ8N292 157 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 ZCCHC24Q8N2G6 241 aaKnown RBP8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 OR8U1Q8NH10 309 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 OR1S1Q8NH92 325 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 ST8SIA2Q92186 375 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 ALX4Q9H161 411 aaPredicted RBP8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 TMEM100Q9NV29 134 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 HOXD11P31277 338 aaPredicted RBP8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 FGF12P61328 243 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 AESQ08117 197 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 PXT1Q8NFP0 134 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 OR5A2Q8NGI9 324 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 OR6K3Q8NGY3 331 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 LEUTXA8MZ59 168 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 ATP6V1G2-DDX39BF2Z307 99 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 EDDM3BP56851 147 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 RPS16P62249 146 aaKnown RBP8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 CLINT1Q14677 625 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 OR2A2Q6IF42 318 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 TMEM217Q8N7C4 229 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 RRNAD1Q96FB5 475 aaKnown RBP8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 TMEM231Q9H6L2 316 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 KALRNO60229 2985 aa8.67□□□□□ -1.02
RBFOX1-202ENST00000340209 WNK2Q9Y3S1 2297 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 IGKV1D-13A0A0B4J2D9 117 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 WRBO00258 174 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 SS18L1O75177 396 aaPredicted RBP8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 IGKV1-13P0DP09 117 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 CD37P11049 281 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 DPPA2Q7Z7J5 298 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 WDR86Q86TI4 376 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 DCTN5Q9BTE1 182 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 MEMO1Q9Y316 297 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 H0YIZ8 118 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 OR2H2O95918 312 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 RBM39Q14498 530 aaKnown RBP8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 Q6ZPA2 131 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 COLCA1Q6ZS62 124 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 CCDC54Q8NEL0 328 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 OR10J5Q8NHC4 309 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 MRGPRDQ8TDS7 321 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 STARD4Q96DR4 205 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 TAS2R3Q9NYW6 316 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 PROB1E7EW31 1015 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 AQP7O14520 342 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 ZNF14P17017 642 aaPredicted RBP8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 RTL6Q6ICC9 239 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 IQCF2Q8IXL9 164 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 PDZD9Q8IXQ8 264 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 RBMXL3Q8N7X1 1067 aaKnown RBP8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 SPSB4Q96A44 273 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 MPC1Q9Y5U8 109 aa8.66□□□□□ -1.02
RBFOX1-202ENST00000340209 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.65□□□□□ -1.02
RBFOX1-202ENST00000340209 CRYAAP02489 173 aa8.65□□□□□ -1.02
RBFOX1-202ENST00000340209 ZNF660Q6AZW8 331 aaPredicted RBP8.65□□□□□ -1.02
RBFOX1-202ENST00000340209 ACOT7LQ6ZUV0 252 aa8.65□□□□□ -1.02
RBFOX1-202ENST00000340209 TBC1D26Q86UD7 250 aa8.65□□□□□ -1.02
RBFOX1-202ENST00000340209 HSD17B11Q8NBQ5 300 aa8.65□□□□□ -1.02
RBFOX1-202ENST00000340209 TMEM185AQ8NFB2 350 aa8.65□□□□□ -1.02
RBFOX1-202ENST00000340209 TP53RKQ96S44 253 aa8.65□□□□□ -1.02
RBFOX1-202ENST00000340209 ZNF107Q9UII5 783 aaPredicted RBP8.65□□□□□ -1.02
RBFOX1-202ENST00000340209 J3QT63 122 aa8.65□□□□□ -1.02
RBFOX1-202ENST00000340209 GFRA3O60609 400 aa8.65□□□□□ -1.02
RBFOX1-202ENST00000340209 ALDH3B1P43353 468 aa8.65□□□□□ -1.02
RBFOX1-202ENST00000340209 DEFA5Q01523 94 aa8.65□□□□□ -1.02
RBFOX1-202ENST00000340209 ZNF718Q3SXZ3 478 aa8.65□□□□□ -1.02
RBFOX1-202ENST00000340209 RGS7BPQ6MZT1 257 aaPredicted RBP8.65□□□□□ -1.02
RBFOX1-202ENST00000340209 SLC51BQ86UW2 128 aa8.65□□□□□ -1.02
RBFOX1-202ENST00000340209 WNT2BQ93097 391 aa8.65□□□□□ -1.02
RBFOX1-202ENST00000340209 NAA60Q9H7X0 242 aa8.65□□□□□ -1.02
RBFOX1-202ENST00000340209 TRAV24A0A0B4J272 114 aa8.65□□□□□ -1.03
RBFOX1-202ENST00000340209 TRGV8A0A0C4DH27 118 aa8.65□□□□□ -1.03
RBFOX1-202ENST00000340209 K7EPK0 472 aa8.65□□□□□ -1.03
RBFOX1-202ENST00000340209 APOC3P02656 99 aa8.65□□□□□ -1.03
RBFOX1-202ENST00000340209 IL2RGP31785 369 aa8.65□□□□□ -1.03
RBFOX1-202ENST00000340209 OR3A1P47881 315 aa8.65□□□□□ -1.03
RBFOX1-202ENST00000340209 TAGLNQ01995 201 aaKnown RBP8.65□□□□□ -1.03
RBFOX1-202ENST00000340209 THOC7Q6I9Y2 204 aaKnown RBP8.65□□□□□ -1.03
RBFOX1-202ENST00000340209 BTNL3Q6UXE8 466 aa8.65□□□□□ -1.03
RBFOX1-202ENST00000340209 ZNF818PQ6ZRF7 136 aa8.65□□□□□ -1.03
RBFOX1-202ENST00000340209 SPACA3Q8IXA5 215 aa8.65□□□□□ -1.03
RBFOX1-202ENST00000340209 FAM71E2Q8N5Q1 922 aa8.65□□□□□ -1.03
RBFOX1-202ENST00000340209 OR52M1Q8NGK5 317 aa8.65□□□□□ -1.03
RBFOX1-202ENST00000340209 PLPPR1Q8TBJ4 325 aa8.65□□□□□ -1.03
RBFOX1-202ENST00000340209 LRRC29Q8WV35 223 aa8.65□□□□□ -1.03
RBFOX1-202ENST00000340209 HRH4Q9H3N8 390 aa8.65□□□□□ -1.03
RBFOX1-202ENST00000340209 KIF25Q9UIL4 384 aa8.65□□□□□ -1.03
RBFOX1-202ENST00000340209 EDARQ9UNE0 448 aa8.65□□□□□ -1.03
RBFOX1-202ENST00000340209 RNF222A6NCQ9 220 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms