RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TMEM246Q9BRR3 403 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 BEX4Q9NWD9 120 aaPredicted RBP12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 ELF5Q9UKW6 265 aaPredicted RBP12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 APCP25054 2843 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 FBN2P35556 2912 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 HECTD1Q9ULT8 2610 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 TRBV6-6A0A0A6YYG2 114 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 A0A1W2PQ09 198 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 TMEM82A0PJX8 343 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 FUOMA2VDF0 154 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 ISPDA4D126 451 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 NDUFS8O00217 210 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 ORC5O43913 435 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 TK1P04183 234 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 CSF1P09603 554 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 TBPP20226 339 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 RBMXP38159 391 aaKnown RBP12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 GDNFP39905 211 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 GRK1Q15835 563 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 SRSF7Q16629 238 aaKnown RBP eCLIP12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 RNASE12Q5GAN4 147 aaKnown RBP12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 STEAP3Q658P3 488 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 BRICD5Q6PL45 260 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 ZNF497Q6ZNH5 498 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 BPIFB2Q8N4F0 458 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 LIME1Q9H400 295 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 CHMP1AQ9HD42 196 aaPredicted RBP12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 KLK11Q9UBX7 282 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 ANAPC10Q9UM13 185 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 MGAT4AQ9UM21 535 aa12.13□□□□□ -0.47
NIPAL3-202ENST00000339255 TMEM30CPA0ZSE6 113 aa12.12□□□□□ -0.47
NIPAL3-202ENST00000339255 TNFRSF13BO14836 293 aaPredicted RBP12.12□□□□□ -0.47
NIPAL3-202ENST00000339255 ADAM20O43506 726 aa12.12□□□□□ -0.47
NIPAL3-202ENST00000339255 FCGR3AP08637 254 aa12.12□□□□□ -0.47
NIPAL3-202ENST00000339255 GPR6P46095 362 aaPredicted RBP12.12□□□□□ -0.47
NIPAL3-202ENST00000339255 DEFA1P59665 94 aa12.12□□□□□ -0.47
NIPAL3-202ENST00000339255 DEFA3P59666 94 aa12.12□□□□□ -0.47
NIPAL3-202ENST00000339255 ATXN7L3Q14CW9 347 aaPredicted RBP12.12□□□□□ -0.47
NIPAL3-202ENST00000339255 CARTPTQ16568 116 aa12.12□□□□□ -0.47
NIPAL3-202ENST00000339255 SLC35E4Q6ICL7 350 aa12.12□□□□□ -0.47
NIPAL3-202ENST00000339255 Q6ZS49 121 aa12.12□□□□□ -0.47
NIPAL3-202ENST00000339255 NLRC3Q7RTR2 1065 aa12.12□□□□□ -0.47
NIPAL3-202ENST00000339255 TOMM5Q8N4H5 51 aa12.12□□□□□ -0.47
NIPAL3-202ENST00000339255 ZNRF1Q8ND25 227 aa12.12□□□□□ -0.47
NIPAL3-202ENST00000339255 OR4S1Q8NGB4 309 aa12.12□□□□□ -0.47
NIPAL3-202ENST00000339255 CCL13Q99616 98 aa12.12□□□□□ -0.47
NIPAL3-202ENST00000339255 SHARPINQ9H0F6 387 aa12.12□□□□□ -0.47
NIPAL3-202ENST00000339255 NCOR1P1Q9H4R4 102 aa12.12□□□□□ -0.47
NIPAL3-202ENST00000339255 MAB21L2Q9Y586 359 aa12.12□□□□□ -0.47
NIPAL3-202ENST00000339255 LANCL1O43813 399 aa12.11□□□□□ -0.47
NIPAL3-202ENST00000339255 NAT1P18440 290 aa12.11□□□□□ -0.47
NIPAL3-202ENST00000339255 AMY2BP19961 511 aa12.11□□□□□ -0.47
NIPAL3-202ENST00000339255 DNASE1P24855 282 aa12.11□□□□□ -0.47
NIPAL3-202ENST00000339255 DSCR9P59020 149 aa12.11□□□□□ -0.47
NIPAL3-202ENST00000339255 LRRC10Q5BKY1 277 aa12.11□□□□□ -0.47
NIPAL3-202ENST00000339255 CLEC2AQ6UVW9 174 aa12.11□□□□□ -0.47
NIPAL3-202ENST00000339255 GDPD3Q7L5L3 318 aa12.11□□□□□ -0.47
NIPAL3-202ENST00000339255 HOGA1Q86XE5 327 aa12.11□□□□□ -0.47
NIPAL3-202ENST00000339255 LYSMD2Q8IV50 215 aa12.11□□□□□ -0.47
NIPAL3-202ENST00000339255 ZNF525Q8N782 197 aa12.11□□□□□ -0.47
NIPAL3-202ENST00000339255 FAM216BQ8N7L0 139 aa12.11□□□□□ -0.47
NIPAL3-202ENST00000339255 TMEM185AQ8NFB2 350 aa12.11□□□□□ -0.47
NIPAL3-202ENST00000339255 SETD6Q8TBK2 473 aa12.11□□□□□ -0.47
NIPAL3-202ENST00000339255 NRGNQ92686 78 aa12.11□□□□□ -0.47
NIPAL3-202ENST00000339255 NINJ1Q92982 152 aa12.11□□□□□ -0.47
NIPAL3-202ENST00000339255 MIOXQ9UGB7 285 aa12.11□□□□□ -0.47
NIPAL3-202ENST00000339255 METRNQ9UJH8 293 aa12.11□□□□□ -0.47
NIPAL3-202ENST00000339255 KIR2DS1A0A191URI9 304 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 ANKRD20A5PA0PJZ0 165 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 GPR37O15354 613 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 SSX4O60224 188 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 ERP29P30040 261 aaKnown RBP12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 FAUP35544 74 aaKnown RBP12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 KIR2DS4P43632 304 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 TAS2R46P59540 309 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 TAS2R19P59542 299 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 KRTAP10-9P60411 292 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 DYRK1AQ13627 763 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 KIR2DS1Q14954 304 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 ACTBL2Q562R1 376 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 KRBOX4Q5JUW0 171 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 RSBN1Q5VWQ0 802 aaPredicted RBP12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 ZNF57Q68EA5 555 aaPredicted RBP12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 TRAT1Q6PIZ9 186 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 ZNF554Q86TJ5 538 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 BEST4Q8NFU0 473 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 PLPPR1Q8TBJ4 325 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 MRPL30Q8TCC3 161 aaKnown RBP12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 DYRK2Q92630 601 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 MBD6Q96DN6 1003 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 COX4I2Q96KJ9 171 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 C7orf50Q9BRJ6 194 aaKnown RBP12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 HDHD3Q9BSH5 251 aaPredicted RBP12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 SLC25A10Q9UBX3 287 aaPredicted RBP12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 MALRD1Q5VYJ5 2156 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 MEIS3P1A6NDR6 274 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 CEACAM18A8MTB9 384 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 ZNF736B4DX44 427 aaPredicted RBP12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 NDUFB3O43676 98 aa12.1□□□□□ -0.47
NIPAL3-202ENST00000339255 MT-ND4P03905 459 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms