RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 PNO1Q9NRX1 252 aaKnown RBP21.1■□□□□ 0.97
SOX1-201ENST00000330949 CYP2G1PQ6ZSU1 146 aa21.09■□□□□ 0.97
SOX1-201ENST00000330949 ADIPOR1Q96A54 375 aa21.09■□□□□ 0.97
SOX1-201ENST00000330949 MAGT1Q9H0U3 335 aa21.09■□□□□ 0.97
SOX1-201ENST00000330949 PRSS50Q9UI38 385 aa21.09■□□□□ 0.97
SOX1-201ENST00000330949 TCRBV21S2A2A0A5A6 115 aa21.09■□□□□ 0.97
SOX1-201ENST00000330949 BIDP55957 195 aa21.09■□□□□ 0.97
SOX1-201ENST00000330949 GABREP78334 506 aa21.09■□□□□ 0.97
SOX1-201ENST00000330949 HHEXQ03014 270 aa21.09■□□□□ 0.97
SOX1-201ENST00000330949 IL24Q13007 206 aa21.09■□□□□ 0.97
SOX1-201ENST00000330949 OR2V1Q8NHB1 315 aa21.09■□□□□ 0.97
SOX1-201ENST00000330949 MOB3AQ96BX8 217 aa21.09■□□□□ 0.97
SOX1-201ENST00000330949 SMIM7Q9BQ49 75 aa21.09■□□□□ 0.97
SOX1-201ENST00000330949 AGMATQ9BSE5 352 aa21.09■□□□□ 0.97
SOX1-201ENST00000330949 WNT5BQ9H1J7 359 aa21.09■□□□□ 0.97
SOX1-201ENST00000330949 PTRH2Q9Y3E5 179 aaKnown RBP21.09■□□□□ 0.97
SOX1-201ENST00000330949 C3orf85A0A1B0GTC6 90 aa21.08■□□□□ 0.97
SOX1-201ENST00000330949 IRF2P14316 349 aa21.08■□□□□ 0.97
SOX1-201ENST00000330949 DEFB119Q8N690 84 aa21.08■□□□□ 0.97
SOX1-201ENST00000330949 VPS13AQ96RL7 3174 aa21.08■□□□□ 0.96
SOX1-201ENST00000330949 IFNA1P01562 189 aa21.08■□□□□ 0.96
SOX1-201ENST00000330949 BRS3P32247 399 aa21.08■□□□□ 0.96
SOX1-201ENST00000330949 SHHQ15465 462 aa21.08■□□□□ 0.96
SOX1-201ENST00000330949 TMEM241Q24JQ0 296 aa21.08■□□□□ 0.96
SOX1-201ENST00000330949 SLC25A24Q6NUK1 477 aa21.08■□□□□ 0.96
SOX1-201ENST00000330949 CENPVQ7Z7K6 275 aaPredicted RBP21.08■□□□□ 0.96
SOX1-201ENST00000330949 ODF3L1Q8IXM7 274 aa21.08■□□□□ 0.96
SOX1-201ENST00000330949 MMABQ96EY8 250 aaPredicted RBP21.08■□□□□ 0.96
SOX1-201ENST00000330949 DIRC2Q96SL1 478 aa21.08■□□□□ 0.96
SOX1-201ENST00000330949 PCGF1Q9BSM1 259 aa21.08■□□□□ 0.96
SOX1-201ENST00000330949 EMC6Q9BV81 110 aa21.08■□□□□ 0.96
SOX1-201ENST00000330949 LNP1A1A4G5 178 aa21.07■□□□□ 0.96
SOX1-201ENST00000330949 HRASP01112 189 aa21.07■□□□□ 0.96
SOX1-201ENST00000330949 IFNA5P01569 189 aa21.07■□□□□ 0.96
SOX1-201ENST00000330949 CTSEP14091 401 aa21.07■□□□□ 0.96
SOX1-201ENST00000330949 TNFRSF4P43489 277 aa21.07■□□□□ 0.96
SOX1-201ENST00000330949 GNB2P62879 340 aa21.07■□□□□ 0.96
SOX1-201ENST00000330949 HIST1H3AP68431 136 aa21.07■□□□□ 0.96
SOX1-201ENST00000330949 BSXQ3C1V8 233 aa21.07■□□□□ 0.96
SOX1-201ENST00000330949 MRGPRGQ86SM5 289 aa21.07■□□□□ 0.96
SOX1-201ENST00000330949 GABRG3Q99928 467 aa21.07■□□□□ 0.96
SOX1-201ENST00000330949 TMEM222Q9H0R3 208 aa21.07■□□□□ 0.96
SOX1-201ENST00000330949 CHST11Q9NPF2 352 aa21.07■□□□□ 0.96
SOX1-201ENST00000330949 RP1P56715 2156 aa21.07■□□□□ 0.96
SOX1-201ENST00000330949 CEBPZOSA8MTT3 80 aa21.07■□□□□ 0.96
SOX1-201ENST00000330949 CNN1P51911 297 aaKnown RBP21.07■□□□□ 0.96
SOX1-201ENST00000330949 ZNF154Q13106 437 aa21.07■□□□□ 0.96
SOX1-201ENST00000330949 PRDX4Q13162 271 aa21.07■□□□□ 0.96
SOX1-201ENST00000330949 ZNF695Q8IW36 515 aa21.07■□□□□ 0.96
SOX1-201ENST00000330949 MBD3L1Q8WWY6 194 aa21.07■□□□□ 0.96
SOX1-201ENST00000330949 RIMS4Q9H426 269 aaPredicted RBP21.07■□□□□ 0.96
SOX1-201ENST00000330949 KLHL13Q9P2N7 655 aa21.07■□□□□ 0.96
SOX1-201ENST00000330949 A0A1W2PPQ1 181 aa21.06■□□□□ 0.96
SOX1-201ENST00000330949 ANOS1P23352 680 aa21.06■□□□□ 0.96
SOX1-201ENST00000330949 HERV-K104P61576 105 aa21.06■□□□□ 0.96
SOX1-201ENST00000330949 CXorf66Q5JRM2 361 aaPredicted RBP21.06■□□□□ 0.96
SOX1-201ENST00000330949 LCN15Q6UWW0 184 aa21.06■□□□□ 0.96
SOX1-201ENST00000330949 CISD2Q8N5K1 135 aaKnown RBP21.06■□□□□ 0.96
SOX1-201ENST00000330949 RNF150Q9ULK6 438 aa21.06■□□□□ 0.96
SOX1-201ENST00000330949 H0YIG0 161 aa21.06■□□□□ 0.96
SOX1-201ENST00000330949 HLA-CQ95604 372 aa21.06■□□□□ 0.96
SOX1-201ENST00000330949 RPRMQ9NS64 109 aa21.06■□□□□ 0.96
SOX1-201ENST00000330949 ZNF705FA8MVS1 300 aaPredicted RBP21.05■□□□□ 0.96
SOX1-201ENST00000330949 MPPED1O15442 326 aa21.05■□□□□ 0.96
SOX1-201ENST00000330949 TSPAN2O60636 221 aa21.05■□□□□ 0.96
SOX1-201ENST00000330949 ZNF705DP0CH99 300 aaPredicted RBP21.05■□□□□ 0.96
SOX1-201ENST00000330949 ZNF705BP0CI00 300 aaPredicted RBP21.05■□□□□ 0.96
SOX1-201ENST00000330949 PLCXD2Q0VAA5 305 aa21.05■□□□□ 0.96
SOX1-201ENST00000330949 PP6455Q8WZ26 134 aa21.05■□□□□ 0.96
SOX1-201ENST00000330949 LIN37Q96GY3 246 aaPredicted RBP21.05■□□□□ 0.96
SOX1-201ENST00000330949 MIEN1Q9BRT3 115 aa21.05■□□□□ 0.96
SOX1-201ENST00000330949 ASXL3Q9C0F0 2248 aa21.05■□□□□ 0.96
SOX1-201ENST00000330949 ZNF41P51814 821 aaPredicted RBP21.05■□□□□ 0.96
SOX1-201ENST00000330949 PRSS58Q8IYP2 241 aa21.05■□□□□ 0.96
SOX1-201ENST00000330949 NEK7Q8TDX7 302 aa21.05■□□□□ 0.96
SOX1-201ENST00000330949 TMEM234Q8WY98 164 aa21.05■□□□□ 0.96
SOX1-201ENST00000330949 ZNF845Q96IR2 970 aaPredicted RBP21.05■□□□□ 0.96
SOX1-201ENST00000330949 OR6C3Q9NZP0 311 aa21.05■□□□□ 0.96
SOX1-201ENST00000330949 SHISA7A6NL88 538 aa21.05■□□□□ 0.96
SOX1-201ENST00000330949 TYMSP04818 313 aa21.05■□□□□ 0.96
SOX1-201ENST00000330949 HLA-DQA1Q5Y7H0 255 aa21.05■□□□□ 0.96
SOX1-201ENST00000330949 TBX15Q96SF7 602 aa21.05■□□□□ 0.96
SOX1-201ENST00000330949 C20orf144Q9BQM9 153 aa21.05■□□□□ 0.96
SOX1-201ENST00000330949 UBE2J1Q9Y385 318 aaPredicted RBP21.05■□□□□ 0.96
SOX1-201ENST00000330949 TNFP01375 233 aa21.04■□□□□ 0.96
SOX1-201ENST00000330949 MRPS34P82930 218 aaKnown RBP21.04■□□□□ 0.96
SOX1-201ENST00000330949 SAPCD1Q5SSQ6 148 aa21.04■□□□□ 0.96
SOX1-201ENST00000330949 TMEM56Q96MV1 263 aa21.04■□□□□ 0.96
SOX1-201ENST00000330949 MS4A10Q96PG2 267 aa21.04■□□□□ 0.96
SOX1-201ENST00000330949 MTIF3Q9H2K0 278 aaKnown RBP21.04■□□□□ 0.96
SOX1-201ENST00000330949 TMEM56-RWDD3S4R434 201 aa21.04■□□□□ 0.96
SOX1-201ENST00000330949 SHANK1Q9Y566 2161 aa21.04■□□□□ 0.96
SOX1-201ENST00000330949 MAP1LC3B2A6NCE7 125 aa21.04■□□□□ 0.96
SOX1-201ENST00000330949 RER1O15258 196 aa21.04■□□□□ 0.96
SOX1-201ENST00000330949 TMEM50AO95807 157 aa21.04■□□□□ 0.96
SOX1-201ENST00000330949 CD82P27701 267 aa21.04■□□□□ 0.96
SOX1-201ENST00000330949 CDCP2Q5VXM1 449 aa21.04■□□□□ 0.96
SOX1-201ENST00000330949 OR2T10Q8NGZ9 312 aa21.04■□□□□ 0.96
SOX1-201ENST00000330949 PGAM5Q96HS1 289 aa21.04■□□□□ 0.96
SOX1-201ENST00000330949 IMMP2LQ96T52 175 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms