RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 CCL13Q99616 98 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 SHARPINQ9H0F6 387 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 LIME1Q9H400 295 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 BARX1Q9HBU1 254 aaPredicted RBP8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 TMEM165Q9HC07 324 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 CHMP1AQ9HD42 196 aaPredicted RBP8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 TBC1D24Q9ULP9 559 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 MAB21L2Q9Y586 359 aa8.55□□□□□ -1.04
VIPAS39-201ENST00000327028 TRBV6-6A0A0A6YYG2 114 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 POM121CA8CG34 1229 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 H7C1Q1 480 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 NAT1P18440 290 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 TMEM33P57088 247 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 IL13RA1P78552 427 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 ASAH1Q13510 395 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 RSBN1Q5VWQ0 802 aaPredicted RBP8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 GVQW1Q8N7I0 195 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 FAM216BQ8N7L0 139 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 SETD6Q8TBK2 473 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 MRPL30Q8TCC3 161 aaKnown RBP8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 RAB1CQ92928 201 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 MED30Q96HR3 178 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 TMEM246Q9BRR3 403 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 FAM234AQ9H0X4 552 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 KAAG1Q9UBP8 84 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 EDARQ9UNE0 448 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 TMEM30CPA0ZSE6 113 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 K7N7A8 449 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 MGST3O14880 152 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 PPIHO43447 177 aaKnown RBP8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 TK1P04183 234 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 DEFA1P59665 94 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 DEFA3P59666 94 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 GRK1Q15835 563 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 SRSF7Q16629 238 aaKnown RBP eCLIP8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 TMEM229BQ8NBD8 167 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 DEDD2Q8WXF8 326 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 NRGNQ92686 78 aa8.54□□□□□ -1.04
VIPAS39-201ENST00000327028 A0A1B0GW55 424 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 PLA2G10O15496 165 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 DUX4L2P0CJ85 424 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 DUX4L3P0CJ86 424 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 DUX4L4P0CJ87 422 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 DUX4L5P0CJ88 424 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 DUX4L6P0CJ89 424 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 DUX4L7P0CJ90 424 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 TAS2R19P59542 299 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 KRTAP10-9P60411 292 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 DYRK1AQ13627 763 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 TMEM155Q4W5P6 130 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 AVPI1Q5T686 147 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 SLC35E4Q6ICL7 350 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 ZNF880Q6PDB4 577 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 DUX4L9Q6RFH8 374 aaPredicted RBP8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 Q6ZPA2 131 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 Q6ZS49 121 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 MOB1BQ7L9L4 216 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 SLC36A1Q7Z2H8 476 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 ZNRF1Q8ND25 227 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 TMEM185AQ8NFB2 350 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 OR5D13Q8NGL4 314 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 SNAPC3Q92966 411 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 COQ2Q96H96 371 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 C7orf50Q9BRJ6 194 aaKnown RBP8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 GSX2Q9BZM3 304 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 DUX4Q9UBX2 424 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 ZNF230Q9UIE0 474 aaPredicted RBP8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 CRYBG3Q68DQ2 2970 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 FBN2P35556 2912 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 SPG11Q96JI7 2443 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 TMPRSS2O15393 492 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 ADAM20O43506 726 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 SELLP14151 372 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 TBPP20226 339 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 CARTPTQ16568 116 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 HIST2H2BCQ6DN03 193 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 BEST4Q8NFU0 473 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 COX4I2Q96KJ9 171 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 ST6GALNAC5Q9BVH7 336 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 ZNF286AQ9HBT8 521 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 Q9N2K0 584 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 TACC2O95359 2948 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 ABCA12Q86UK0 2595 aa8.53□□□□□ -1.04
VIPAS39-201ENST00000327028 LINC00854A0A1B0GVQ3 168 aa8.52□□□□□ -1.04
VIPAS39-201ENST00000327028 ZNF736B4DX44 427 aaPredicted RBP8.52□□□□□ -1.04
VIPAS39-201ENST00000327028 MT-ND4P03905 459 aa8.52□□□□□ -1.04
VIPAS39-201ENST00000327028 CD74P04233 296 aa8.52□□□□□ -1.04
VIPAS39-201ENST00000327028 FCER2P06734 321 aa8.52□□□□□ -1.04
VIPAS39-201ENST00000327028 AKAIN1P0CW23 69 aa8.52□□□□□ -1.04
VIPAS39-201ENST00000327028 GIFP27352 417 aa8.52□□□□□ -1.04
VIPAS39-201ENST00000327028 GPR6P46095 362 aaPredicted RBP8.52□□□□□ -1.04
VIPAS39-201ENST00000327028 PDLIM4P50479 330 aa8.52□□□□□ -1.04
VIPAS39-201ENST00000327028 ATP5J2P56134 94 aa8.52□□□□□ -1.04
VIPAS39-201ENST00000327028 P2RX3P56373 397 aa8.52□□□□□ -1.04
VIPAS39-201ENST00000327028 AESQ08117 197 aa8.52□□□□□ -1.04
VIPAS39-201ENST00000327028 ACTBL2Q562R1 376 aa8.52□□□□□ -1.04
VIPAS39-201ENST00000327028 KRBOX4Q5JUW0 171 aa8.52□□□□□ -1.04
VIPAS39-201ENST00000327028 OR52W1Q6IF63 320 aa8.52□□□□□ -1.04
VIPAS39-201ENST00000327028 LYPD2Q6UXB3 125 aa8.52□□□□□ -1.04
VIPAS39-201ENST00000327028 ZNF525Q8N782 197 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms