RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 PYDC2Q56P42 97 aa11.32□□□□□ -0.6
PRPF18-201ENST00000320054 SLC35E4Q6ICL7 350 aa11.32□□□□□ -0.6
PRPF18-201ENST00000320054 PRSS57Q6UWY2 283 aa11.32□□□□□ -0.6
PRPF18-201ENST00000320054 ZNF497Q6ZNH5 498 aa11.32□□□□□ -0.6
PRPF18-201ENST00000320054 BPIFB2Q8N4F0 458 aa11.32□□□□□ -0.6
PRPF18-201ENST00000320054 GPX8Q8TED1 209 aa11.32□□□□□ -0.6
PRPF18-201ENST00000320054 SMIM4Q8WVI0 70 aa11.32□□□□□ -0.6
PRPF18-201ENST00000320054 FCAMRQ8WWV6 532 aa11.32□□□□□ -0.6
PRPF18-201ENST00000320054 NEIL1Q96FI4 390 aaPredicted RBP11.32□□□□□ -0.6
PRPF18-201ENST00000320054 CYYR1Q96J86 154 aa11.32□□□□□ -0.6
PRPF18-201ENST00000320054 CMSS1Q9BQ75 279 aaKnown RBP11.32□□□□□ -0.6
PRPF18-201ENST00000320054 BPESC1Q9GZL8 116 aa11.32□□□□□ -0.6
PRPF18-201ENST00000320054 PATZ1Q9HBE1 687 aaKnown RBP11.32□□□□□ -0.6
PRPF18-201ENST00000320054 ETAA1Q9NY74 926 aa11.32□□□□□ -0.6
PRPF18-201ENST00000320054 ELF5Q9UKW6 265 aaPredicted RBP11.32□□□□□ -0.6
PRPF18-201ENST00000320054 YLPM1P49750 1951 aaKnown RBP11.31□□□□□ -0.6
PRPF18-201ENST00000320054 A0A1B0GW55 424 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 FUOMA2VDF0 154 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 HSPB6O14558 160 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 GPR37O15354 613 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 NDUFB3O43676 98 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 SSX5O60225 188 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 NAPSAO96009 420 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 LPLP06858 475 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 DUX4L2P0CJ85 424 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 DUX4L3P0CJ86 424 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 DUX4L4P0CJ87 422 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 DUX4L5P0CJ88 424 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 DUX4L6P0CJ89 424 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 DUX4L7P0CJ90 424 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 PTHLHP12272 177 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 SELLP14151 372 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 RPS2P15880 293 aaKnown RBP11.31□□□□□ -0.6
PRPF18-201ENST00000320054 DTYMKP23919 212 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 ERP29P30040 261 aaKnown RBP11.31□□□□□ -0.6
PRPF18-201ENST00000320054 CBX5P45973 191 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 MRPS15P82914 257 aaKnown RBP11.31□□□□□ -0.6
PRPF18-201ENST00000320054 SSBP1Q04837 148 aaKnown RBP11.31□□□□□ -0.6
PRPF18-201ENST00000320054 ATXN7L3Q14CW9 347 aaPredicted RBP11.31□□□□□ -0.6
PRPF18-201ENST00000320054 CLEC12BQ2HXU8 276 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 LRRC10Q5BKY1 277 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 RSBN1Q5VWQ0 802 aaPredicted RBP11.31□□□□□ -0.6
PRPF18-201ENST00000320054 DUX4L9Q6RFH8 374 aaPredicted RBP11.31□□□□□ -0.6
PRPF18-201ENST00000320054 NLRC3Q7RTR2 1065 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 Q8N402 240 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 TMEM185AQ8NFB2 350 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 OR8B3Q8NGG8 313 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 OR52I2Q8NH67 350 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 PLPPR1Q8TBJ4 325 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 NUDCD2Q8WVJ2 157 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 COQ2Q96H96 371 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 OR8B2Q96RD0 313 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 SDHCQ99643 169 aaPredicted RBP11.31□□□□□ -0.6
PRPF18-201ENST00000320054 OCSTAMPQ9BR26 566 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 CCDC32Q9BV29 185 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 CHST6Q9GZX3 395 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 C12orf4Q9NQ89 552 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 CTSZQ9UBR2 303 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 DUX4Q9UBX2 424 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 SLC25A10Q9UBX3 287 aaPredicted RBP11.31□□□□□ -0.6
PRPF18-201ENST00000320054 PCDHB10Q9UN67 800 aa11.31□□□□□ -0.6
PRPF18-201ENST00000320054 MAP1AP78559 2803 aaPredicted RBP11.31□□□□□ -0.6
PRPF18-201ENST00000320054 ASH1LQ9NR48 2969 aaKnown RBP11.3□□□□□ -0.6
PRPF18-201ENST00000320054 TMEM30CPA0ZSE6 113 aa11.3□□□□□ -0.6
PRPF18-201ENST00000320054 MEIOCA2RUB1 952 aa11.3□□□□□ -0.6
PRPF18-201ENST00000320054 DVL1O14640 695 aa11.3□□□□□ -0.6
PRPF18-201ENST00000320054 MT-ND4P03905 459 aa11.3□□□□□ -0.6
PRPF18-201ENST00000320054 SLC25A16P16260 332 aa11.3□□□□□ -0.6
PRPF18-201ENST00000320054 NPY4RP50391 375 aa11.3□□□□□ -0.6
PRPF18-201ENST00000320054 DGCR2P98153 550 aa11.3□□□□□ -0.6
PRPF18-201ENST00000320054 GUCA2AQ02747 115 aa11.3□□□□□ -0.6
PRPF18-201ENST00000320054 SRSF7Q16629 238 aaKnown RBP eCLIP11.3□□□□□ -0.6
PRPF18-201ENST00000320054 C11orf91Q3C1V1 193 aa11.3□□□□□ -0.6
PRPF18-201ENST00000320054 ZNF841Q6ZN19 808 aa11.3□□□□□ -0.6
PRPF18-201ENST00000320054 Q6ZS49 121 aa11.3□□□□□ -0.6
PRPF18-201ENST00000320054 GDPD3Q7L5L3 318 aa11.3□□□□□ -0.6
PRPF18-201ENST00000320054 TRAPPC6BQ86SZ2 158 aa11.3□□□□□ -0.6
PRPF18-201ENST00000320054 MRPL30Q8TCC3 161 aaKnown RBP11.3□□□□□ -0.6
PRPF18-201ENST00000320054 DYRK2Q92630 601 aa11.3□□□□□ -0.6
PRPF18-201ENST00000320054 GCDHQ92947 438 aaPredicted RBP11.3□□□□□ -0.6
PRPF18-201ENST00000320054 MTFP1Q9UDX5 166 aa11.3□□□□□ -0.6
PRPF18-201ENST00000320054 ANAPC10Q9UM13 185 aa11.3□□□□□ -0.6
PRPF18-201ENST00000320054 RBMX2Q9Y388 322 aaKnown RBP11.3□□□□□ -0.6
PRPF18-201ENST00000320054 PRRC2AP48634 2157 aaKnown RBP11.3□□□□□ -0.6
PRPF18-201ENST00000320054 MALRD1Q5VYJ5 2156 aa11.3□□□□□ -0.6
PRPF18-201ENST00000320054 NBPF19A0A087WUL8 3843 aa11.29□□□□□ -0.6
PRPF18-201ENST00000320054 IGHV4-30-2A0A087WSY4 118 aa11.29□□□□□ -0.6
PRPF18-201ENST00000320054 FCN3O75636 299 aa11.29□□□□□ -0.6
PRPF18-201ENST00000320054 RBBP9O75884 186 aa11.29□□□□□ -0.6
PRPF18-201ENST00000320054 IGHV2-5P01817 119 aa11.29□□□□□ -0.6
PRPF18-201ENST00000320054 FCGR3AP08637 254 aa11.29□□□□□ -0.6
PRPF18-201ENST00000320054 P2RX3P56373 397 aa11.29□□□□□ -0.6
PRPF18-201ENST00000320054 ACTBP60709 375 aa11.29□□□□□ -0.6
PRPF18-201ENST00000320054 ACTG1P63261 375 aa11.29□□□□□ -0.6
PRPF18-201ENST00000320054 MEF2CQ06413 473 aaPredicted RBP11.29□□□□□ -0.6
PRPF18-201ENST00000320054 AESQ08117 197 aa11.29□□□□□ -0.6
PRPF18-201ENST00000320054 KRBOX4Q5JUW0 171 aa11.29□□□□□ -0.6
PRPF18-201ENST00000320054 ZNF880Q6PDB4 577 aa11.29□□□□□ -0.6
PRPF18-201ENST00000320054 MOB1BQ7L9L4 216 aa11.29□□□□□ -0.6
PRPF18-201ENST00000320054 CLDND2Q8NHS1 167 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms