RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 HIST1H2BHQ93079 126 aa6.6□□□□□ -1.35
CDHR3-201ENST00000317716 C14orf144Q96I85 54 aa6.6□□□□□ -1.35
CDHR3-201ENST00000317716 HIST1H2BNQ99877 126 aa6.6□□□□□ -1.35
CDHR3-201ENST00000317716 HIST1H2BMQ99879 126 aa6.6□□□□□ -1.35
CDHR3-201ENST00000317716 BARX1Q9HBU1 254 aaPredicted RBP6.6□□□□□ -1.35
CDHR3-201ENST00000317716 CYTL1Q9NRR1 136 aa6.6□□□□□ -1.35
CDHR3-201ENST00000317716 SCN8AQ9UQD0 1980 aa6.6□□□□□ -1.35
CDHR3-201ENST00000317716 RALGAPA1Q6GYQ0 2036 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 SERPINE3A8MV23 424 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 TRAPPC2LH3BP13 241 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 DEDDO75618 318 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 ASAH2BP0C7U1 165 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 SEC11BP0C7V7 166 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 CCL2P13500 99 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 KITLGP21583 273 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 IL2RGP31785 369 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 ZNF133P52736 654 aaPredicted RBP6.59□□□□□ -1.35
CDHR3-201ENST00000317716 TCL1AP56279 114 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 SLC35B1P78383 322 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 RPL19P84098 196 aaKnown RBP6.59□□□□□ -1.35
CDHR3-201ENST00000317716 PAX5Q02548 391 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 LURAP1LQ8IV03 231 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 POC1AQ8NBT0 407 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 ERRFI1Q9UJM3 462 aaPredicted RBP6.59□□□□□ -1.35
CDHR3-201ENST00000317716 POMT1Q9Y6A1 747 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 IGHV5-51A0A0C4DH38 117 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 C3orf85A0A1B0GTC6 90 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 GRIFINA4D1Z8 144 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 KIAA1324LA8MWY0 1029 aaPredicted RBP6.59□□□□□ -1.35
CDHR3-201ENST00000317716 ZNF737O75373 536 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 POU2F2P09086 479 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 TAS2R60P59551 318 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 RPP30P78346 268 aaKnown RBP6.59□□□□□ -1.35
CDHR3-201ENST00000317716 TMEM241Q24JQ0 296 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 ZNF684Q5T5D7 378 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 C16orf82Q7Z2V1 217 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 TMEM105Q8N8V8 129 aa6.59□□□□□ -1.35
CDHR3-201ENST00000317716 BCAT2O15382 392 aaPredicted RBP6.59□□□□□ -1.36
CDHR3-201ENST00000317716 LYPD3O95274 346 aa6.59□□□□□ -1.36
CDHR3-201ENST00000317716 NRASP01111 189 aa6.59□□□□□ -1.36
CDHR3-201ENST00000317716 MSR1P21757 451 aa6.59□□□□□ -1.36
CDHR3-201ENST00000317716 TFPI2P48307 235 aa6.59□□□□□ -1.36
CDHR3-201ENST00000317716 FAM3AP98173 230 aa6.59□□□□□ -1.36
CDHR3-201ENST00000317716 ZNF816Q0VGE8 651 aaPredicted RBP6.59□□□□□ -1.36
CDHR3-201ENST00000317716 PNLIPRP3Q17RR3 467 aa6.59□□□□□ -1.36
CDHR3-201ENST00000317716 KIAA0895LQ68EN5 471 aa6.59□□□□□ -1.36
CDHR3-201ENST00000317716 LIAT1Q6ZQX7 453 aa6.59□□□□□ -1.36
CDHR3-201ENST00000317716 FAM58AQ8N1B3 248 aa6.59□□□□□ -1.36
CDHR3-201ENST00000317716 IFI44Q8TCB0 444 aa6.59□□□□□ -1.36
CDHR3-201ENST00000317716 TMEM230Q96A57 120 aa6.59□□□□□ -1.36
CDHR3-201ENST00000317716 NTNG2Q96CW9 530 aa6.59□□□□□ -1.36
CDHR3-201ENST00000317716 SMIM8Q96KF7 97 aa6.59□□□□□ -1.36
CDHR3-201ENST00000317716 CACNG5Q9UF02 275 aa6.59□□□□□ -1.36
CDHR3-201ENST00000317716 PRSS50Q9UI38 385 aa6.59□□□□□ -1.36
CDHR3-201ENST00000317716 SELENOKQ9Y6D0 94 aa6.59□□□□□ -1.36
CDHR3-201ENST00000317716 ELOA3CA0A087WX78 387 aaPredicted RBP6.58□□□□□ -1.36
CDHR3-201ENST00000317716 CLEC18AA5D8T8 446 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 AQP7P3A6NL99 342 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 TP53I11O14683 189 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 ZNF217O75362 1048 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 IGHV3-13P01766 116 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 IGHV3-7P01780 117 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 BGLAPP02818 100 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 ERGP11308 486 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 GPR3P46089 330 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 BTNL8Q6UX41 500 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 SYT13Q7L8C5 426 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 TBC1D26Q86UD7 250 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 CLEC18CQ8NCF0 446 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 EDARADDQ8WWZ3 215 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 MARS2Q96GW9 593 aaKnown RBP6.58□□□□□ -1.36
CDHR3-201ENST00000317716 PITPNC1Q9UKF7 332 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 TLCD2A6NGC4 264 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 TNFRSF10CO14798 259 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 TMEM127O75204 238 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 CTSDP07339 412 aaPredicted RBP6.58□□□□□ -1.36
CDHR3-201ENST00000317716 FAM157CP0CG43 387 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 RAC2P15153 192 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 HIST1H1BP16401 226 aaKnown RBP6.58□□□□□ -1.36
CDHR3-201ENST00000317716 EDDM3BP56851 147 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 FOXK1P85037 733 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 ENDOGQ14249 297 aaKnown RBP6.58□□□□□ -1.36
CDHR3-201ENST00000317716 UNQ6494/PRO21346Q6UXR6 183 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 YRDCQ86U90 279 aaKnown RBP6.58□□□□□ -1.36
CDHR3-201ENST00000317716 DMRTC2Q8IXT2 367 aaPredicted RBP6.58□□□□□ -1.36
CDHR3-201ENST00000317716 GAPTQ8N292 157 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 C11orf42Q8N5U0 333 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 SIGLECL1Q8N7X8 197 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 OR2T10Q8NGZ9 312 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 EXTL1Q92935 676 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 WBP1Q96G27 269 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 CCL28Q9NRJ3 127 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 TMEM100Q9NV29 134 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 ACACBO00763 2458 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 IGLV1-36A0A0B4J1U3 117 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 TGFBR3LH3BV60 316 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 SIRPB1O00241 398 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 DUX1O43812 170 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 DANCRP0C864 163 aa6.58□□□□□ -1.36
CDHR3-201ENST00000317716 TCN2P20062 427 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms