RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 PPP1CAP62136 330 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 TMEM41BQ5BJD5 291 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF319Q9P2F9 582 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 ST3GAL6Q9Y274 331 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 A0A1B0GX78 115 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 PROB1E7EW31 1015 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 SYNGR2O43760 224 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 PRKNO60260 465 aaPredicted RBP4.14□□□□□ -1.75
PTPN13-201ENST00000316707 TUSC2O75896 110 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 F2RP25116 425 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 LCN15Q6UWW0 184 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 METTL27Q8N6F8 245 aaPredicted RBP4.14□□□□□ -1.75
PTPN13-201ENST00000316707 OR5D13Q8NGL4 314 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 RNF138Q8WVD3 245 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 TMEM171Q8WVE6 324 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF524Q96C55 264 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 MANBALQ9NQG1 85 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 CTXND1A0A1B0GTU2 59 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 A0A1W2PPQ1 181 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF25P17030 456 aaPredicted RBP4.14□□□□□ -1.75
PTPN13-201ENST00000316707 COL10A1Q03692 680 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 WDR25Q64LD2 544 aaPredicted RBP4.14□□□□□ -1.75
PTPN13-201ENST00000316707 TIPARPQ7Z3E1 657 aaKnown RBP4.14□□□□□ -1.75
PTPN13-201ENST00000316707 CENPVQ7Z7K6 275 aaPredicted RBP4.14□□□□□ -1.75
PTPN13-201ENST00000316707 MRPL30Q8TCC3 161 aaKnown RBP4.14□□□□□ -1.75
PTPN13-201ENST00000316707 OR6C3Q9NZP0 311 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 ATXN7L1Q9ULK2 861 aaPredicted RBP4.14□□□□□ -1.75
PTPN13-201ENST00000316707 HEATR5BQ9P2D3 2071 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 TRAV9-1A0A075B6T8 112 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 DLEU1O43261 78 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 CHST1O43916 411 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 SSSCA1O60232 199 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 COX5AP20674 150 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 MOB1BQ7L9L4 216 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 CPEB2Q7Z5Q1 589 aaKnown RBP4.14□□□□□ -1.75
PTPN13-201ENST00000316707 LSRQ86X29 649 aaPredicted RBP4.14□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF573Q86YE8 665 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 PLXDC1Q8IUK5 500 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 SELENOHQ8IZQ5 122 aaKnown RBP4.14□□□□□ -1.75
PTPN13-201ENST00000316707 SHISA5Q8N114 240 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 TMEM217Q8N7C4 229 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 NEIL1Q96FI4 390 aaPredicted RBP4.14□□□□□ -1.75
PTPN13-201ENST00000316707 REEP6Q96HR9 211 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 PNRC2Q9NPJ4 139 aaKnown RBP4.14□□□□□ -1.75
PTPN13-201ENST00000316707 TRPM7Q96QT4 1865 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 ADAM20O43506 726 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 OR7C1O76099 320 aaPredicted RBP4.14□□□□□ -1.75
PTPN13-201ENST00000316707 CCL5P13501 91 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 NUBP1P53384 320 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 TMEM42Q69YG0 159 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 FAM180AQ6UWF9 173 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 LSM10Q969L4 123 aaKnown RBP4.14□□□□□ -1.75
PTPN13-201ENST00000316707 DNAJA3Q96EY1 480 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 MS4A10Q96PG2 267 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 SIGLEC12Q96PQ1 595 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 KLHDC3Q9BQ90 382 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF665Q9H7R5 613 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 METTL7AQ9H8H3 244 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 C19orf25Q9UFG5 118 aaPredicted RBP4.14□□□□□ -1.75
PTPN13-201ENST00000316707 KIR2DL5BA0A0G2JN68 375 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 KIR2DL5BA0A0G2JPC4 375 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 B4E171 279 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 RPLP1P05386 114 aaKnown RBP4.14□□□□□ -1.75
PTPN13-201ENST00000316707 TSPAN7P41732 249 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 DYNLT3P51808 116 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 C1orf61Q13536 156 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 RNPS1Q15287 305 aaKnown RBP4.14□□□□□ -1.75
PTPN13-201ENST00000316707 MSMO1Q15800 293 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 LRRC75BQ2VPJ9 315 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 TSPO2Q5TGU0 170 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF880Q6PDB4 577 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 DMRTC2Q8IXT2 367 aaPredicted RBP4.14□□□□□ -1.75
PTPN13-201ENST00000316707 C20orf196Q8IYI0 205 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 KIR2DL5AQ8N109 375 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 DNASE2BQ8WZ79 361 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF845Q96IR2 970 aaPredicted RBP4.14□□□□□ -1.75
PTPN13-201ENST00000316707 SLC7A10Q9NS82 523 aa4.14□□□□□ -1.75
PTPN13-201ENST00000316707 FRMPD3Q5JV73 1810 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF816-ZNF321PA0A0X1KG74 233 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 SCGB1D1O95968 90 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 TUBG1P23258 451 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 CTHP32929 405 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 TNFSF10P50591 281 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 TDGF1P3P51864 188 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 RUNX1Q01196 453 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 SMAD4Q13485 552 aaKnown RBP4.13□□□□□ -1.75
PTPN13-201ENST00000316707 SF3B5Q9BWJ5 86 aaKnown RBP4.13□□□□□ -1.75
PTPN13-201ENST00000316707 ULBP2Q9BZM5 246 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 CASP8AP2Q9UKL3 1982 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 ZFAND5O76080 213 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 NRASP01111 189 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 CNN1P51911 297 aaKnown RBP4.13□□□□□ -1.75
PTPN13-201ENST00000316707 SAXO1Q8IYX7 474 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 EXTL1Q92935 676 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 TMEM208Q9BTX3 173 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 RNF212BA8MTL3 300 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF705FA8MVS1 300 aaPredicted RBP4.13□□□□□ -1.75
PTPN13-201ENST00000316707 SERPINA7P05543 415 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 CYC1P08574 325 aa4.13□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF705DP0CH99 300 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms