RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 IP6K3Q96PC2 410 aa13□□□□□ -0.33
CSDC2-201ENST00000306149 C1QTNF5Q9BXJ0 243 aa13□□□□□ -0.33
CSDC2-201ENST00000306149 OR51B6Q9H340 312 aa13□□□□□ -0.33
CSDC2-201ENST00000306149 ZNF391Q9UJN7 358 aa13□□□□□ -0.33
CSDC2-201ENST00000306149 A0A1B0GW64 132 aa12.99□□□□□ -0.33
CSDC2-201ENST00000306149 YKT6O15498 198 aa12.99□□□□□ -0.33
CSDC2-201ENST00000306149 NGFP01138 241 aa12.99□□□□□ -0.33
CSDC2-201ENST00000306149 PRDX4Q13162 271 aa12.99□□□□□ -0.33
CSDC2-201ENST00000306149 TMEM211Q6ICI0 200 aa12.99□□□□□ -0.33
CSDC2-201ENST00000306149 TMEM182Q6ZP80 229 aaPredicted RBP12.99□□□□□ -0.33
CSDC2-201ENST00000306149 LFNGQ8NES3 379 aa12.99□□□□□ -0.33
CSDC2-201ENST00000306149 NEK7Q8TDX7 302 aa12.99□□□□□ -0.33
CSDC2-201ENST00000306149 CPNE4Q96A23 557 aaPredicted RBP12.99□□□□□ -0.33
CSDC2-201ENST00000306149 ISOC2Q96AB3 205 aa12.99□□□□□ -0.33
CSDC2-201ENST00000306149 SIGLEC12Q96PQ1 595 aa12.99□□□□□ -0.33
CSDC2-201ENST00000306149 PBDC1Q9BVG4 233 aa12.99□□□□□ -0.33
CSDC2-201ENST00000306149 UBE2J1Q9Y385 318 aaPredicted RBP12.99□□□□□ -0.33
CSDC2-201ENST00000306149 TMED3Q9Y3Q3 217 aa12.99□□□□□ -0.33
CSDC2-201ENST00000306149 R4GN57 208 aa12.99□□□□□ -0.33
CSDC2-201ENST00000306149 LOC400499M0QZD8 3231 aa12.99□□□□□ -0.33
CSDC2-201ENST00000306149 FAM166BA8MTA8 275 aa12.99□□□□□ -0.33
CSDC2-201ENST00000306149 UMAD1C9J7I0 102 aa12.99□□□□□ -0.33
CSDC2-201ENST00000306149 CER1O95813 267 aa12.99□□□□□ -0.33
CSDC2-201ENST00000306149 S100A6P06703 90 aa12.99□□□□□ -0.33
CSDC2-201ENST00000306149 FOSL1P15407 271 aa12.99□□□□□ -0.33
CSDC2-201ENST00000306149 TBC1D26Q86UD7 250 aa12.99□□□□□ -0.33
CSDC2-201ENST00000306149 ZNF488Q96MN9 340 aa12.99□□□□□ -0.33
CSDC2-201ENST00000306149 CDX2Q99626 313 aaPredicted RBP12.99□□□□□ -0.33
CSDC2-201ENST00000306149 FBXO7Q9Y3I1 522 aa12.99□□□□□ -0.33
CSDC2-201ENST00000306149 LOXL2Q9Y4K0 774 aa12.99□□□□□ -0.33
CSDC2-201ENST00000306149 IGKV1D-13A0A0B4J2D9 117 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 A0A1W2PPH5 198 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 A6NLC8 198 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 M0R036 132 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 LAMTOR5O43504 91 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 TNFSF12O43508 249 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 IGKV1-13P0DP09 117 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 TDGF1P13385 188 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 ZXDAP98168 799 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 CXorf66Q5JRM2 361 aaPredicted RBP12.98□□□□□ -0.33
CSDC2-201ENST00000306149 ZNF818PQ6ZRF7 136 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 ABHD14AQ9BUJ0 271 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 SLC35B3Q9H1N7 401 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 DIDO1Q9BTC0 2240 aaKnown RBP12.98□□□□□ -0.33
CSDC2-201ENST00000306149 K7N7A8 449 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 HSD17B6O14756 317 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 PPP1CCP36873 323 aaKnown RBP12.98□□□□□ -0.33
CSDC2-201ENST00000306149 EWSR1Q01844 656 aaKnown RBP eCLIP12.98□□□□□ -0.33
CSDC2-201ENST00000306149 C6orf15Q6UXA7 325 aaPredicted RBP12.98□□□□□ -0.33
CSDC2-201ENST00000306149 GAPTQ8N292 157 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 FAM213BQ8TBF2 198 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 MALSU1Q96EH3 234 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 BOD1Q96IK1 185 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 C11orf1Q9H5F2 150 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 MTCH1Q9NZJ7 389 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 METTL1Q9UBP6 276 aaKnown RBP12.98□□□□□ -0.33
CSDC2-201ENST00000306149 ESPL1Q14674 2120 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 RPL36A-HNRNPH2H7BZ11 118 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 SRPXP78539 464 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 GNMTQ14749 295 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 HERPUD1Q15011 391 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 C3AR1Q16581 482 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 DPPA2Q7Z7J5 298 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 OR1J1Q8NGS3 322 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 SPSB4Q96A44 273 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 PRO3102Q9H379 93 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 PLA2G3Q9NZ20 509 aa12.98□□□□□ -0.33
CSDC2-201ENST00000306149 ZNF732B4DXR9 585 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 SSSCA1O60232 199 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 CDS2O95674 445 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 SERPINA7P05543 415 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 RAB5AP20339 215 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 HOXA6P31267 233 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 ZNF695Q8IW36 515 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 REPIN1Q9BWE0 567 aaKnown RBP12.97□□□□□ -0.33
CSDC2-201ENST00000306149 PRDM14Q9GZV8 571 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 TMEM222Q9H0R3 208 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 SMDT1Q9H4I9 107 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 ZNF552Q9H707 407 aaPredicted RBP12.97□□□□□ -0.33
CSDC2-201ENST00000306149 SEBOXQ9HB31 216 aaPredicted RBP12.97□□□□□ -0.33
CSDC2-201ENST00000306149 IGSF23A1L1A6 192 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 GPR37O15354 613 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 SYNGR1O43759 233 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 OR13C7P0DN81 318 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 ITGA3P26006 1051 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 SULT1A1P50225 295 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 SSPNQ14714 243 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 UBALD2Q8IYN6 164 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 FAM185AQ8N0U4 392 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 OR2C3Q8N628 320 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 SNIP1Q8TAD8 396 aaKnown RBP12.97□□□□□ -0.33
CSDC2-201ENST00000306149 TCEAL7Q9BRU2 100 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 KCNJ16Q9NPI9 418 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 CCL28Q9NRJ3 127 aa12.97□□□□□ -0.33
CSDC2-201ENST00000306149 KIAA2026Q5HYC2 2103 aa12.96□□□□□ -0.33
CSDC2-201ENST00000306149 ASPMQ8IZT6 3477 aa12.96□□□□□ -0.33
CSDC2-201ENST00000306149 TRDCB7Z8K6 153 aa12.96□□□□□ -0.33
CSDC2-201ENST00000306149 ADAM20O43506 726 aa12.96□□□□□ -0.33
CSDC2-201ENST00000306149 LILRA1O75019 489 aa12.96□□□□□ -0.33
CSDC2-201ENST00000306149 CST7O76096 145 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms