RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 ASCL1P50553 236 aa12.4□□□□□ -0.42
SMG8-201ENST00000300917 ZNF83P51522 516 aa12.4□□□□□ -0.42
SMG8-201ENST00000300917 AKR1C2P52895 323 aa12.4□□□□□ -0.42
SMG8-201ENST00000300917 AKR1C1Q04828 323 aa12.4□□□□□ -0.42
SMG8-201ENST00000300917 PLEKHN1Q494U1 663 aaPredicted RBP12.4□□□□□ -0.42
SMG8-201ENST00000300917 PAN3Q58A45 887 aaKnown RBP12.4□□□□□ -0.42
SMG8-201ENST00000300917 WDR31Q8NA23 367 aa12.4□□□□□ -0.42
SMG8-201ENST00000300917 LHFPL5Q8TAF8 219 aa12.4□□□□□ -0.42
SMG8-201ENST00000300917 LRRC20Q8TCA0 184 aa12.4□□□□□ -0.42
SMG8-201ENST00000300917 RBPMSQ93062 196 aaKnown RBP12.4□□□□□ -0.42
SMG8-201ENST00000300917 KIRREL1Q96J84 757 aa12.4□□□□□ -0.42
SMG8-201ENST00000300917 OR51I2Q9H344 312 aa12.4□□□□□ -0.42
SMG8-201ENST00000300917 NAA60Q9H7X0 242 aa12.4□□□□□ -0.42
SMG8-201ENST00000300917 IGKV1-6A0A0C4DH72 117 aa12.4□□□□□ -0.43
SMG8-201ENST00000300917 TK1P04183 234 aa12.4□□□□□ -0.43
SMG8-201ENST00000300917 CYCSP99999 105 aaKnown RBP12.4□□□□□ -0.43
SMG8-201ENST00000300917 SEM1Q6ZVN7 128 aa12.4□□□□□ -0.43
SMG8-201ENST00000300917 ZNF565Q8N9K5 539 aa12.4□□□□□ -0.43
SMG8-201ENST00000300917 POC1AQ8NBT0 407 aa12.4□□□□□ -0.43
SMG8-201ENST00000300917 RTL8AQ9BWD3 113 aa12.4□□□□□ -0.43
SMG8-201ENST00000300917 Q9N2K0 584 aa12.4□□□□□ -0.43
SMG8-201ENST00000300917 CCL28Q9NRJ3 127 aa12.4□□□□□ -0.43
SMG8-201ENST00000300917 PROCRQ9UNN8 238 aa12.4□□□□□ -0.43
SMG8-201ENST00000300917 LHX6Q9UPM6 363 aa12.4□□□□□ -0.43
SMG8-201ENST00000300917 KALRNO60229 2985 aa12.39□□□□□ -0.43
SMG8-201ENST00000300917 ZSCAN5BA6NJL1 495 aa12.39□□□□□ -0.43
SMG8-201ENST00000300917 TIMM8AO60220 97 aaPredicted RBP12.39□□□□□ -0.43
SMG8-201ENST00000300917 CRYZL1O95825 349 aa12.39□□□□□ -0.43
SMG8-201ENST00000300917 NUP62P37198 522 aaPredicted RBP12.39□□□□□ -0.43
SMG8-201ENST00000300917 SRSF4Q08170 494 aaKnown RBP12.39□□□□□ -0.43
SMG8-201ENST00000300917 SURF2Q15527 256 aaPredicted RBP12.39□□□□□ -0.43
SMG8-201ENST00000300917 RGS7BPQ6MZT1 257 aaPredicted RBP12.39□□□□□ -0.43
SMG8-201ENST00000300917 FAM53AQ6NSI3 398 aaPredicted RBP12.39□□□□□ -0.43
SMG8-201ENST00000300917 GAPTQ8N292 157 aa12.39□□□□□ -0.43
SMG8-201ENST00000300917 LILRB1Q8NHL6 650 aaPredicted RBP12.39□□□□□ -0.43
SMG8-201ENST00000300917 LINC00052Q96N35 136 aa12.39□□□□□ -0.43
SMG8-201ENST00000300917 SLC5A7Q9GZV3 580 aa12.39□□□□□ -0.43
SMG8-201ENST00000300917 PARP12Q9H0J9 701 aaKnown RBP12.39□□□□□ -0.43
SMG8-201ENST00000300917 TPRP12270 2363 aaKnown RBP12.39□□□□□ -0.43
SMG8-201ENST00000300917 EIF2S3P41091 472 aaKnown RBP12.39□□□□□ -0.43
SMG8-201ENST00000300917 LILRB2Q8N423 598 aa12.39□□□□□ -0.43
SMG8-201ENST00000300917 TPRX1Q8N7U7 411 aa12.39□□□□□ -0.43
SMG8-201ENST00000300917 OR52M1Q8NGK5 317 aa12.39□□□□□ -0.43
SMG8-201ENST00000300917 STARD4Q96DR4 205 aa12.39□□□□□ -0.43
SMG8-201ENST00000300917 PFDN2Q9UHV9 154 aa12.39□□□□□ -0.43
SMG8-201ENST00000300917 OR5B21A6NL26 309 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 TNFSF13O75888 250 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 UBA52P62987 128 aaKnown RBP12.38□□□□□ -0.43
SMG8-201ENST00000300917 TMEM268Q5VZI3 342 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 ZNF818PQ6ZRF7 136 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 OR51H1Q8NH63 302 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 ANGPTL6Q8NI99 470 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 GLYATL2Q8WU03 294 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 GTF3AQ92664 365 aaKnown RBP12.38□□□□□ -0.43
SMG8-201ENST00000300917 MOB3AQ96BX8 217 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 NARS2Q96I59 477 aaKnown RBP12.38□□□□□ -0.43
SMG8-201ENST00000300917 OR1A1Q9P1Q5 309 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 UBE2J1Q9Y385 318 aaPredicted RBP12.38□□□□□ -0.43
SMG8-201ENST00000300917 RBM7Q9Y580 266 aaKnown RBP12.38□□□□□ -0.43
SMG8-201ENST00000300917 GNRHRP30968 328 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 CCDC28AQ8IWP9 274 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 WNT2BQ93097 391 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 NARFLQ9H6Q4 476 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 RASL12Q9NYN1 266 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 J3QT63 122 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 HSPA12AO43301 675 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 FBXO24O75426 580 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 OR2H2O95918 312 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 TMEM187Q14656 261 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 PRSS54Q6PEW0 395 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 PLPPR1Q8TBJ4 325 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 ASB13Q8WXK3 278 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 GLRX2Q9NS18 164 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 ASF1BQ9NVP2 202 aa12.38□□□□□ -0.43
SMG8-201ENST00000300917 IZUMO4Q1ZYL8 232 aa12.37□□□□□ -0.43
SMG8-201ENST00000300917 TBC1D26Q86UD7 250 aa12.37□□□□□ -0.43
SMG8-201ENST00000300917 MRPL30Q8TCC3 161 aaKnown RBP12.37□□□□□ -0.43
SMG8-201ENST00000300917 MS4A7Q9GZW8 240 aaPredicted RBP12.37□□□□□ -0.43
SMG8-201ENST00000300917 MAGT1Q9H0U3 335 aa12.37□□□□□ -0.43
SMG8-201ENST00000300917 KIF25Q9UIL4 384 aa12.37□□□□□ -0.43
SMG8-201ENST00000300917 TRAPPC2LQ9UL33 140 aa12.37□□□□□ -0.43
SMG8-201ENST00000300917 PTPRQQ9UMZ3 2332 aa12.37□□□□□ -0.43
SMG8-201ENST00000300917 CHD8Q9HCK8 2581 aa12.37□□□□□ -0.43
SMG8-201ENST00000300917 M0R1B8 84 aa12.37□□□□□ -0.43
SMG8-201ENST00000300917 MLNRO43193 412 aa12.37□□□□□ -0.43
SMG8-201ENST00000300917 NAPSAO96009 420 aa12.37□□□□□ -0.43
SMG8-201ENST00000300917 ZNF16P17020 682 aaPredicted RBP12.37□□□□□ -0.43
SMG8-201ENST00000300917 BMP5P22003 454 aa12.37□□□□□ -0.43
SMG8-201ENST00000300917 SNTB1Q13884 538 aaKnown RBP12.37□□□□□ -0.43
SMG8-201ENST00000300917 INO80CQ6PI98 192 aaPredicted RBP12.37□□□□□ -0.43
SMG8-201ENST00000300917 FBXW12Q6X9E4 464 aa12.37□□□□□ -0.43
SMG8-201ENST00000300917 DPPA2Q7Z7J5 298 aa12.37□□□□□ -0.43
SMG8-201ENST00000300917 LRP11Q86VZ4 500 aa12.37□□□□□ -0.43
SMG8-201ENST00000300917 SLC38A6Q8IZM9 456 aa12.37□□□□□ -0.43
SMG8-201ENST00000300917 SLC35G3Q8N808 338 aa12.37□□□□□ -0.43
SMG8-201ENST00000300917 BSCL2Q96G97 398 aaPredicted RBP12.37□□□□□ -0.43
SMG8-201ENST00000300917 OPA3Q9H6K4 179 aa12.37□□□□□ -0.43
SMG8-201ENST00000300917 ERRFI1Q9UJM3 462 aaPredicted RBP12.37□□□□□ -0.43
SMG8-201ENST00000300917 ZNF345Q14585 488 aa12.36□□□□□ -0.43
SMG8-201ENST00000300917 RPL7L1Q6DKI1 246 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms