RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 C4orf17Q53FE4 359 aa13.25□□□□□ -0.29
HERPUD1-201ENST00000300302 Q6ZPA2 131 aa13.25□□□□□ -0.29
HERPUD1-201ENST00000300302 MOB1BQ7L9L4 216 aa13.25□□□□□ -0.29
HERPUD1-201ENST00000300302 MOGAT3Q86VF5 341 aa13.25□□□□□ -0.29
HERPUD1-201ENST00000300302 ERGIC1Q969X5 290 aa13.25□□□□□ -0.29
HERPUD1-201ENST00000300302 DHRS9Q9BPW9 319 aa13.25□□□□□ -0.29
HERPUD1-201ENST00000300302 MGAT4CQ9UBM8 478 aa13.25□□□□□ -0.29
HERPUD1-201ENST00000300302 MGAT4AQ9UM21 535 aa13.25□□□□□ -0.29
HERPUD1-201ENST00000300302 PRB1P04280 392 aa13.24□□□□□ -0.29
HERPUD1-201ENST00000300302 CTXN2P0C2S0 81 aa13.24□□□□□ -0.29
HERPUD1-201ENST00000300302 PGAM2P15259 253 aa13.24□□□□□ -0.29
HERPUD1-201ENST00000300302 GRNP28799 593 aaKnown RBP13.24□□□□□ -0.29
HERPUD1-201ENST00000300302 UQCRFS1P47985 274 aa13.24□□□□□ -0.29
HERPUD1-201ENST00000300302 SNTB1Q13884 538 aaKnown RBP13.24□□□□□ -0.29
HERPUD1-201ENST00000300302 TMEM128Q5BJH2 165 aa13.24□□□□□ -0.29
HERPUD1-201ENST00000300302 BEX5Q5H9J7 111 aa13.24□□□□□ -0.29
HERPUD1-201ENST00000300302 ZNF660Q6AZW8 331 aaPredicted RBP13.24□□□□□ -0.29
HERPUD1-201ENST00000300302 LYG2Q86SG7 212 aa13.24□□□□□ -0.29
HERPUD1-201ENST00000300302 TMEM185AQ8NFB2 350 aa13.24□□□□□ -0.29
HERPUD1-201ENST00000300302 ZNF436Q9C0F3 470 aaPredicted RBP13.24□□□□□ -0.29
HERPUD1-201ENST00000300302 C14orf166Q9Y224 244 aaKnown RBP13.24□□□□□ -0.29
HERPUD1-201ENST00000300302 NPTNQ9Y639 398 aa13.24□□□□□ -0.29
HERPUD1-201ENST00000300302 TPRP12270 2363 aaKnown RBP13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 FABP7O15540 132 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 ADH4P08319 380 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 GNLYP22749 145 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 KCNJ3P48549 501 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 IL13RA1P78552 427 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 TLE1Q04724 770 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 PPP1R1AQ13522 171 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 CDSNQ15517 529 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 ZNF497Q6ZNH5 498 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 DMRTC2Q8IXT2 367 aaPredicted RBP13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 C12orf45Q8N5I9 185 aaPredicted RBP13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 UXS1Q8NBZ7 420 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 ADAD2Q8NCV1 583 aaKnown RBP13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 OR2AK2Q8NG84 335 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 ZFAND1Q8TCF1 268 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 C5orf66Q9H5L9 145 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 DECR2Q9NUI1 292 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 DNAJB11Q9UBS4 358 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 RNF115Q9Y4L5 304 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 SMG1Q96Q15 3661 aaKnown RBP13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 RFPL4AA6NLU0 287 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 C17orf100A8MU93 164 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 RFPL4AL1F8VTS6 287 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 M0R233 179 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 C1QBP02746 253 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 TK1P04183 234 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 TNFRSF1AP19438 455 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 VAMP1P23763 118 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 ZBTB25P24278 435 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 FCGR2CP31995 323 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 BAMBIQ13145 260 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 ZNF880Q6PDB4 577 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 NOXA1Q86UR1 476 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 ZNF808Q8N4W9 903 aaPredicted RBP13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 OR11L1Q8NGX0 322 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 GCM1Q9NP62 436 aa13.23□□□□□ -0.29
HERPUD1-201ENST00000300302 C9orf170A2RU37 121 aa13.22□□□□□ -0.29
HERPUD1-201ENST00000300302 E7EQL1 145 aa13.22□□□□□ -0.29
HERPUD1-201ENST00000300302 CD55P08174 381 aa13.22□□□□□ -0.29
HERPUD1-201ENST00000300302 APOBEC3AP31941 199 aaPredicted RBP13.22□□□□□ -0.29
HERPUD1-201ENST00000300302 CEBPDP49716 269 aaPredicted RBP13.22□□□□□ -0.29
HERPUD1-201ENST00000300302 ATXN7L3Q14CW9 347 aaPredicted RBP13.22□□□□□ -0.29
HERPUD1-201ENST00000300302 C20orf204Q6ZNR8 217 aa13.22□□□□□ -0.29
HERPUD1-201ENST00000300302 GAPTQ8N292 157 aa13.22□□□□□ -0.29
HERPUD1-201ENST00000300302 GCSAMQ8N6F7 178 aa13.22□□□□□ -0.29
HERPUD1-201ENST00000300302 OR4A4PQ8NGN8 299 aa13.22□□□□□ -0.29
HERPUD1-201ENST00000300302 Q8TCH9 128 aa13.22□□□□□ -0.29
HERPUD1-201ENST00000300302 PHB2Q99623 299 aa13.22□□□□□ -0.29
HERPUD1-201ENST00000300302 RTBDNQ9BSG5 229 aaPredicted RBP13.22□□□□□ -0.29
HERPUD1-201ENST00000300302 TRAF4Q9BUZ4 470 aaPredicted RBP13.22□□□□□ -0.29
HERPUD1-201ENST00000300302 SEBOXQ9HB31 216 aaPredicted RBP13.22□□□□□ -0.29
HERPUD1-201ENST00000300302 RNF7Q9UBF6 113 aa13.22□□□□□ -0.29
HERPUD1-201ENST00000300302 TRAPPC2LQ9UL33 140 aa13.22□□□□□ -0.29
HERPUD1-201ENST00000300302 WIPI2Q9Y4P8 454 aa13.22□□□□□ -0.29
HERPUD1-201ENST00000300302 USP24Q9UPU5 2620 aa13.22□□□□□ -0.29
HERPUD1-201ENST00000300302 PSPNO60542 156 aa13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 DIRAS3O95661 229 aa13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 LHBP01229 141 aa13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 SCTP09683 121 aa13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 IRF2P14316 349 aa13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 EGR1P18146 543 aa13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 AGAP20933 346 aa13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 CD34P28906 385 aa13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 HERV-K104P61576 105 aa13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 SEC61A1P61619 476 aaKnown RBP13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 HLA-DRB3P79483 266 aa13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 DHODHQ02127 395 aa13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 TFF3Q07654 80 aa13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 TESK1Q15569 626 aa13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 SPRNQ5BIV9 151 aa13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 IGSF11Q5DX21 431 aa13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 C11orf88Q6PI97 169 aa13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 BOLLQ8N9W6 283 aaKnown RBP13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 PLPPR1Q8TBJ4 325 aa13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 ZNF486Q96H40 463 aaPredicted RBP13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 TMPRSS13Q9BYE2 586 aa13.21□□□□□ -0.29
HERPUD1-201ENST00000300302 EGLN1Q9GZT9 426 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms