RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 PRR14LQ5THK1 2151 aa12.12□□□□□ -0.47
C9orf3-202ENST00000297979 TMEM211Q6ICI0 200 aa12.12□□□□□ -0.47
C9orf3-202ENST00000297979 Q8IYB0 196 aa12.12□□□□□ -0.47
C9orf3-202ENST00000297979 OR2AK2Q8NG84 335 aa12.12□□□□□ -0.47
C9orf3-202ENST00000297979 GRPEL2Q8TAA5 225 aa12.12□□□□□ -0.47
C9orf3-202ENST00000297979 HYLS1Q96M11 299 aa12.12□□□□□ -0.47
C9orf3-202ENST00000297979 HLA-AP01891 365 aaKnown RBP12.12□□□□□ -0.47
C9orf3-202ENST00000297979 FPR2P25090 351 aa12.12□□□□□ -0.47
C9orf3-202ENST00000297979 NPY4RP50391 375 aa12.12□□□□□ -0.47
C9orf3-202ENST00000297979 UBE2MP61081 183 aaKnown RBP12.12□□□□□ -0.47
C9orf3-202ENST00000297979 FAHD2BQ6P2I3 314 aaPredicted RBP12.12□□□□□ -0.47
C9orf3-202ENST00000297979 RELL2Q8NC24 303 aaPredicted RBP12.12□□□□□ -0.47
C9orf3-202ENST00000297979 FAHD2AQ96GK7 314 aa12.12□□□□□ -0.47
C9orf3-202ENST00000297979 OSGIN2Q9Y236 505 aa12.12□□□□□ -0.47
C9orf3-202ENST00000297979 DUSP1P28562 367 aa12.11□□□□□ -0.47
C9orf3-202ENST00000297979 TAS2R31P59538 309 aa12.11□□□□□ -0.47
C9orf3-202ENST00000297979 UXS1Q8NBZ7 420 aa12.11□□□□□ -0.47
C9orf3-202ENST00000297979 SCGB3A2Q96PL1 93 aa12.11□□□□□ -0.47
C9orf3-202ENST00000297979 CXXC4Q9H2H0 198 aa12.11□□□□□ -0.47
C9orf3-202ENST00000297979 ZNF286AQ9HBT8 521 aa12.11□□□□□ -0.47
C9orf3-202ENST00000297979 JKAMPQ9P055 326 aa12.11□□□□□ -0.47
C9orf3-202ENST00000297979 SPTBN4Q9H254 2564 aa12.11□□□□□ -0.47
C9orf3-202ENST00000297979 C16orf97H3BN30 126 aa12.11□□□□□ -0.47
C9orf3-202ENST00000297979 CDIPTO14735 213 aa12.11□□□□□ -0.47
C9orf3-202ENST00000297979 GRPP07492 148 aa12.11□□□□□ -0.47
C9orf3-202ENST00000297979 GIPP09681 153 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-202ENST00000297979 ESCO2Q56NI9 601 aa12.11□□□□□ -0.47
C9orf3-202ENST00000297979 AADACL3Q5VUY0 350 aa12.11□□□□□ -0.47
C9orf3-202ENST00000297979 C12orf45Q8N5I9 185 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-202ENST00000297979 NEU1Q99519 415 aa12.11□□□□□ -0.47
C9orf3-202ENST00000297979 NECAP2Q9NVZ3 263 aa12.11□□□□□ -0.47
C9orf3-202ENST00000297979 GPR132Q9UNW8 380 aa12.11□□□□□ -0.47
C9orf3-202ENST00000297979 IGF2RP11717 2491 aa12.11□□□□□ -0.47
C9orf3-202ENST00000297979 PIEZO2Q9H5I5 2752 aa12.11□□□□□ -0.47
C9orf3-202ENST00000297979 MCRIP1C9JLW8 97 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 PGA5P0DJD9 388 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 ZBTB25P24278 435 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 ERVK11-1P61568 191 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 PPP1R1AQ13522 171 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 Q6ZR03 302 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 LYG2Q86SG7 212 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 PEG10Q86TG7 708 aaKnown RBP12.1□□□□□ -0.47
C9orf3-202ENST00000297979 ADAD2Q8NCV1 583 aaKnown RBP12.1□□□□□ -0.47
C9orf3-202ENST00000297979 NRIP2Q9BQI9 281 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 CHIAQ9BZP6 476 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 FAM212BQ9NTI7 297 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-202ENST00000297979 SLC22A25Q6T423 547 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 UNQ6494/PRO21346Q6UXR6 183 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 OR2T35Q8NGX2 323 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 ZFAND1Q8TCF1 268 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 NEK7Q8TDX7 302 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 ZCCHC14Q8WYQ9 949 aaKnown RBP12.1□□□□□ -0.47
C9orf3-202ENST00000297979 RND1Q92730 232 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 VKORC1Q9BQB6 163 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 HEATR1Q9H583 2144 aaKnown RBP12.1□□□□□ -0.47
C9orf3-202ENST00000297979 IGHV3-64DA0A0J9YX35 117 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 OR5H14A6NHG9 310 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 F5H5P2 479 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 WRBO00258 174 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 GOSR2O14653 212 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 OR2A4O95047 310 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 OR5H8P0DN80 308 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 AKR1C4P17516 323 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 NKX6-1P78426 367 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-202ENST00000297979 SURF2Q15527 256 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-202ENST00000297979 Q6ZPA2 131 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 OR8H3Q8N146 312 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 SUMF2Q8NBJ7 301 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 OR2A7Q96R45 310 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 ZNF2Q9BSG1 426 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-202ENST00000297979 C5orf66Q9H5L9 145 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 MSL2Q9HCI7 577 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 PIPOXQ9P0Z9 390 aa12.1□□□□□ -0.47
C9orf3-202ENST00000297979 C9orf170A2RU37 121 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 NDUFS8O00217 210 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 HSPB6O14558 160 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 ZNF250P15622 560 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 CD34P28906 385 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 GLRXP35754 106 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 ECI1P42126 302 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 RAP2BP61225 183 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 C2orf68Q2NKX9 166 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 C22orf34Q6ZV56 151 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 DMRTA2Q96SC8 542 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 PLSCR3Q9NRY6 295 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 BOLA1Q9Y3E2 137 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 C3orf80F5H4A9 247 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 SLC22A5O76082 557 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 NXPH2O95156 264 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 NAPSAO96009 420 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 DNASE1P24855 282 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 IL13RA1P78552 427 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 MPPED2Q15777 294 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 MSMPQ1L6U9 139 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 TMEM185AQ8NFB2 350 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 TLNRD1Q9H1K6 362 aa12.09□□□□□ -0.47
C9orf3-202ENST00000297979 DSPP15924 2871 aaKnown RBP12.08□□□□□ -0.48
C9orf3-202ENST00000297979 TRAV24A0A0B4J272 114 aa12.08□□□□□ -0.48
C9orf3-202ENST00000297979 TRGV8A0A0C4DH27 118 aa12.08□□□□□ -0.48
C9orf3-202ENST00000297979 SERTM2A0A1B0GWG4 89 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms