RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 MUC21A0A0G2JKD1 596 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 MUC21A0A140T8X8 626 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 P2RY10O00398 339 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 PLPP3O14495 311 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 PAGE4O60829 102 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 PDGFRLQ15198 375 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 MUC21Q5SSG8 566 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 ZNF296Q8WUU4 475 aaPredicted RBP10.36□□□□□ -0.75
SNIP1-201ENST00000296215 LRRC61Q9BV99 259 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 PSENENQ9NZ42 101 aa10.36□□□□□ -0.75
SNIP1-201ENST00000296215 A0A0G2JLM5 398 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 LOC107984156A0A0G2JMH3 177 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 UBE2L5PA0A1B0GUS4 154 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 A0A1W2PR48 441 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 KBTBD11O94819 623 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 LEPROTL1O95214 131 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 APOMO95445 188 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 PCBP3P57721 371 aaKnown RBP10.35□□□□□ -0.75
SNIP1-201ENST00000296215 INSM1Q01101 510 aaPredicted RBP10.35□□□□□ -0.75
SNIP1-201ENST00000296215 TAF10Q12962 218 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 RTP5Q14D33 572 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 PHF19Q5T6S3 580 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 LHFPL2Q6ZUX7 228 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 ARL17AQ8IVW1 177 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 OR1K1Q8NGR3 316 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 HRASLS2Q9NWW9 162 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 COLQQ9Y215 455 aaPredicted RBP10.35□□□□□ -0.75
SNIP1-201ENST00000296215 TRBV7-9A0A0J9YWB2 115 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 A1L4Q6 167 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 FAHP16930 419 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 CCR5P51681 352 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 RPS24P62847 133 aaKnown RBP10.35□□□□□ -0.75
SNIP1-201ENST00000296215 HIST1H1AQ02539 215 aaPredicted RBP10.35□□□□□ -0.75
SNIP1-201ENST00000296215 GLB1LQ6UWU2 654 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 OR52M1Q8NGK5 317 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 ZNF479Q96JC4 524 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 TMEM30AQ9NV96 361 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 NKX2-6A6NCS4 301 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 ELNP15502 786 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 ZNF83P51522 516 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 ACVR1Q04771 509 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 ZNF750Q32MQ0 723 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 VSTM2AQ8TAG5 236 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 ULBP2Q9BZM5 246 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 PSG11Q9UQ72 335 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 FAM208AQ9UK61 1670 aaKnown RBP10.35□□□□□ -0.75
SNIP1-201ENST00000296215 C3orf80F5H4A9 247 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 B3GALT2O43825 422 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 OR10D3Q8NH80 312 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 BORCS8Q96FH0 119 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 OR8B2Q96RD0 313 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 PAAF1Q9BRP4 392 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 NUDT22Q9BRQ3 303 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 TUBD1Q9UJT1 453 aa10.35□□□□□ -0.75
SNIP1-201ENST00000296215 A0A0D9SEW6 157 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 IGLC2P0DOY2 106 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 IGLC3P0DOY3 106 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 WASP42768 502 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 WDR82Q6UXN9 313 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 NR2C2APQ86WQ0 139 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 DUSP15Q9H1R2 295 aaPredicted RBP10.34□□□□□ -0.75
SNIP1-201ENST00000296215 IL17CQ9P0M4 197 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 C19orf53Q9UNZ5 99 aaPredicted RBP10.34□□□□□ -0.75
SNIP1-201ENST00000296215 GAGE12JA6NER3 117 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 GAGE7O76087 117 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 GAGE12FP0CL80 117 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 GAGE12GP0CL81 117 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 GAGE12IP0CL82 117 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 MGAT2Q10469 447 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 GAGE4Q13068 117 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 MRPL2Q5T653 305 aaKnown RBP10.34□□□□□ -0.75
SNIP1-201ENST00000296215 CYP2G1PQ6ZSU1 146 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 SPRED2Q7Z698 418 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 SCD5Q86SK9 330 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 FAM19A2Q8N3H0 131 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 OR8G5Q8NG78 346 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 OR2A1Q8NGT9 310 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 TMEM140Q9NV12 185 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 CACNG4Q9UBN1 327 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 LAMB4A4D0S4 1761 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 TMEM189A5PLL7 270 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 MST1LQ2TV78 715 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 POC1AQ8NBT0 407 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 OR10G4Q8NGN3 311 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 OR10G9Q8NGN4 311 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 OR10G7Q8NGN6 311 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 DOK4Q8TEW6 326 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 RNF126Q9BV68 326 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.34□□□□□ -0.75
SNIP1-201ENST00000296215 TMEM262E9PQX1 116 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 Q1RN00 199 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 CEACAM16Q2WEN9 425 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 TRMT12Q53H54 448 aaKnown RBP10.34□□□□□ -0.75
SNIP1-201ENST00000296215 TIMM23BQ5SRD1 257 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 FAM71E1Q6IPT2 247 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 CALHM1Q8IU99 346 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 LRRC25Q8N386 305 aaPredicted RBP10.34□□□□□ -0.75
SNIP1-201ENST00000296215 PRSS3P2Q8NHM4 247 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 RPS4Y2Q8TD47 263 aa10.34□□□□□ -0.75
SNIP1-201ENST00000296215 LINC00470Q9BZP3 86 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms