RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 CYC1P08574 325 aa10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 TRGC1P0CF51 173 aa10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 SPSB2Q99619 263 aa10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 LAT2Q9GZY6 243 aa10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 S1PR5Q9H228 398 aa10.46□□□□□ -0.73
SHROOM3-201ENST00000296043 PHIPQ8WWQ0 1821 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 PITX3O75364 302 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 SOD2P04179 222 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 ORM2P19652 201 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 CDAP32320 146 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 PSG5Q15238 335 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 PYCR3Q53H96 274 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 SHDQ96IW2 340 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 CDC14BO60729 498 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 CEACAM6P40199 344 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 FBLN7Q53RD9 439 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 CD99L2Q8TCZ2 262 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 WDR13Q9H1Z4 485 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 FNDC4Q9H6D8 234 aaPredicted RBP10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 TNFSF18Q9UNG2 199 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 PTPRDP23468 1912 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 IL4P05112 153 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 RELBQ01201 579 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 MED29Q9NX70 200 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 A0A1B0GTH9 108 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 VSIG10L2P0DP72 767 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 SNAI3Q3KNW1 292 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 ASCL4Q6XD76 172 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 MRPL24Q96A35 216 aaKnown RBP10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 ENTPD2Q9Y5L3 495 aa10.46□□□□□ -0.74
SHROOM3-201ENST00000296043 AMY1AP04745 511 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 PHOSPHO2Q8TCD6 241 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 COL8A1P27658 744 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 SRIP30626 198 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 HSF5Q4G112 596 aaPredicted RBP10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 ATRAIDQ6UW56 229 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 TEX29Q8N6K0 151 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 ANKRD10Q9NXR5 420 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 RER1O15258 196 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 PRKNO60260 465 aaPredicted RBP10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 TYMSP04818 313 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 CLDN18P56856 261 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 C17orf67Q0P5P2 114 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 CALHM3Q86XJ0 350 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 APOOQ9BUR5 198 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 PSG11Q9UQ72 335 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 CACNA1HO95180 2353 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 CASP8AP2Q9UKL3 1982 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 FCGR3AP08637 254 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 ALKBH6Q3KRA9 238 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 CST9Q5W186 159 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 TUSC5Q8IXB3 177 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 SAP30LQ9HAJ7 183 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 EIF1BO60739 113 aaKnown RBP10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 EIF1P41567 113 aaKnown RBP10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 DEFB133Q30KQ1 61 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 TBL2Q9Y4P3 447 aaKnown RBP10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 PIK3C2AO00443 1686 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 J3KRW8 73 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 TFPI2P48307 235 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 SPATA46Q5T0L3 261 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 HDHD3Q9BSH5 251 aaPredicted RBP10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 MOSPD3O75425 235 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 IGSF21Q96ID5 467 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 GDF9O60383 454 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 MDH2P40926 338 aaKnown RBP10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 KLF3P57682 345 aaPredicted RBP10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 ARIH2OSQ8N7S6 290 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 OR5A1Q8NGJ0 315 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 SDF2Q99470 211 aa10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 ERRFI1Q9UJM3 462 aaPredicted RBP10.45□□□□□ -0.74
SHROOM3-201ENST00000296043 A0A1W2PR48 441 aa10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 HSPB2A8KAH6 182 aa10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 HSPB2Q16082 182 aa10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 KBTBD11O94819 623 aa10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 COX6CP09669 75 aa10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 RGS7BPQ6MZT1 257 aaPredicted RBP10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 OR4P4Q8NGL7 312 aa10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 RPS4Y2Q8TD47 263 aa10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 KCNE3Q9Y6H6 103 aa10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 A1L4Q6 167 aa10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 FAM157BP0CG42 384 aa10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 ABHD17CQ6PCB6 329 aa10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 GBGT1Q8N5D6 347 aa10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 HS3ST3A1Q9Y663 406 aa10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 MEX3AA1L020 520 aaKnown RBP10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 KIAA1644Q3SXP7 199 aa10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 IGHV3-15A0A0B4J1V0 119 aa10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 TNFSF10P50591 281 aa10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 PELI1Q96FA3 418 aa10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 CPEB1Q9BZB8 566 aaKnown RBP10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 MED12LQ86YW9 2145 aa10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 PTGESO14684 152 aa10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 SHBQ15464 509 aa10.44□□□□□ -0.74
SHROOM3-201ENST00000296043 A0A1W2PRD5 423 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 A0A1W2PRF3 423 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 A0A1W2PRM7 423 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 PLPP2O43688 288 aa10.43□□□□□ -0.74
SHROOM3-201ENST00000296043 SLCO2B1O94956 709 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms